BLASTX nr result

ID: Coptis21_contig00009616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009616
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510976.1| Oligosaccharide translocation protein rft1, ...   405   e-111
ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107
ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]     393   e-107
ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sat...   391   e-106
ref|XP_002871280.1| hypothetical protein ARALYDRAFT_325378 [Arab...   387   e-105

>ref|XP_002510976.1| Oligosaccharide translocation protein rft1, putative [Ricinus
            communis] gi|223550091|gb|EEF51578.1| Oligosaccharide
            translocation protein rft1, putative [Ricinus communis]
          Length = 436

 Score =  405 bits (1042), Expect = e-111
 Identities = 214/300 (71%), Positives = 236/300 (78%)
 Frame = +3

Query: 6    YAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXXAATLLRCMTTYILIVRQMNME 185
            YAQAILI+  ACILELLAE                     ATLLRC+T YILIVRQ  ME
Sbjct: 131  YAQAILINACACILELLAEPLYILSQNLLLLKLRLMAETVATLLRCLTMYILIVRQPGME 190

Query: 186  KEIVFALSQIAYGACXXXXXXXXXXXXRIVRSSNLIPFRMGNMLDLDGKLLHMCMLFTGQ 365
            K+IVFALSQ AYGAC                SS L PFR+G ++D D +L +MCMLFT Q
Sbjct: 191  KDIVFALSQTAYGACLFIGYWSYFLLFCSFGSSELFPFRLGTIMDYDKQLCNMCMLFTLQ 250

Query: 366  SFRKLVLQEGEKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARFASGQ 545
            SFRKLVLQEGEKM+LVW DTP+NQAVYGLVDKLGSLVVRLVFLPFEESSYATFAR ASGQ
Sbjct: 251  SFRKLVLQEGEKMVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARSASGQ 310

Query: 546  NPCGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRYYCL 725
            +P   RKL G LTEALKLVLLIGLV MAFGPSYSY+LIR+LYG+KWSDGEAS AL+YYCL
Sbjct: 311  HPEKRRKLGGYLTEALKLVLLIGLVFMAFGPSYSYSLIRLLYGNKWSDGEASTALQYYCL 370

Query: 726  YVIVLAMNGTSEAFLHAVATDNQLKRSNDYLLIFSVIYIVLNIRLIRFAGAVGLIAANSL 905
            Y+IVLAMNGTSEAFLHAVAT+ QLKRSND LL+FS+IY+VLN+ LIR AGA+GLI ANSL
Sbjct: 371  YIIVLAMNGTSEAFLHAVATEKQLKRSNDSLLVFSIIYVVLNVLLIRSAGAIGLILANSL 430


>ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  394 bits (1013), Expect = e-107
 Identities = 206/301 (68%), Positives = 236/301 (78%)
 Frame = +3

Query: 3   PYAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXXAATLLRCMTTYILIVRQMNM 182
           PYAQAILI+G ACILELLAE                    AATLLRC+T YILIV+Q +M
Sbjct: 79  PYAQAILINGCACILELLAEPLYIVSQNLLLLKLRLIVETAATLLRCLTMYILIVKQTSM 138

Query: 183 EKEIVFALSQIAYGACXXXXXXXXXXXXRIVRSSNLIPFRMGNMLDLDGKLLHMCMLFTG 362
           +K IVFALSQ AYGAC            R  RSS L PFR+G ++D D +L  MC+LFT 
Sbjct: 139 DKGIVFALSQTAYGACLFLGYWSYFVLFRAFRSSVLFPFRLGTIMDYDKQLSSMCVLFTL 198

Query: 363 QSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARFASG 542
           QSF+KL+LQEGEK +LVW DTP+NQAVYGLVDKLG LVVRLVFLPFEESSYATFAR ASG
Sbjct: 199 QSFQKLILQEGEKFVLVWLDTPYNQAVYGLVDKLGILVVRLVFLPFEESSYATFARSASG 258

Query: 543 QNPCGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRYYC 722
           ++P  +RKL   L+EALKLVLLIG+V M FGPSYSY+LIR+LYG KWSDGEAS AL+YYC
Sbjct: 259 KDPNKSRKLGSCLSEALKLVLLIGVVFMTFGPSYSYSLIRMLYGRKWSDGEASTALQYYC 318

Query: 723 LYVIVLAMNGTSEAFLHAVATDNQLKRSNDYLLIFSVIYIVLNIRLIRFAGAVGLIAANS 902
            YVIVLAMNGTSEAFLHAVAT++QLKRSND LL+FS+IY+V+N+ LI+ AGAVGLI ANS
Sbjct: 319 FYVIVLAMNGTSEAFLHAVATESQLKRSNDSLLVFSLIYVVMNVLLIKSAGAVGLILANS 378

Query: 903 L 905
           L
Sbjct: 379 L 379


>ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  393 bits (1009), Expect = e-107
 Identities = 207/301 (68%), Positives = 230/301 (76%)
 Frame = +3

Query: 3    PYAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXXAATLLRCMTTYILIVRQMNM 182
            P+ QAILI+GFACILELLAE                     ATL RC+T Y LIV+Q  M
Sbjct: 121  PHGQAILINGFACILELLAEPVYILSQNLVLLELRLMVETVATLSRCLTMYFLIVKQTGM 180

Query: 183  EKEIVFALSQIAYGACXXXXXXXXXXXXRIVRSSNLIPFRMGNMLDLDGKLLHMCMLFTG 362
            EK I+FALSQ AYGAC            +  R S L PFR G M+D D +L  MC+LFT 
Sbjct: 181  EKSIIFALSQSAYGACLFLGYWGYLLLSQKFRVSYLFPFREGKMIDFDQQLSKMCILFTF 240

Query: 363  QSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARFASG 542
            QSFRKL+LQEGEK++LVW DTP+NQAVYGLVDKLGSLVVRLVFLPFEESSY TFAR ASG
Sbjct: 241  QSFRKLILQEGEKIVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYVTFARSASG 300

Query: 543  QNPCGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRYYC 722
            Q P  ++KL  +LTE+LKLVLLIGLV MAFGPSYSY+LIR+LYG KWSDGEAS ALR YC
Sbjct: 301  QYPGKSKKLGNSLTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRCYC 360

Query: 723  LYVIVLAMNGTSEAFLHAVATDNQLKRSNDYLLIFSVIYIVLNIRLIRFAGAVGLIAANS 902
             YVIVLAMNGTSEAF+HAVAT+ QLKRSND LLIFS+IYIVLN+ LIR AGAVGLI ANS
Sbjct: 361  FYVIVLAMNGTSEAFMHAVATERQLKRSNDSLLIFSLIYIVLNVMLIRLAGAVGLILANS 420

Query: 903  L 905
            L
Sbjct: 421  L 421


>ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sativus]
            gi|449520289|ref|XP_004167166.1| PREDICTED: protein RFT1
            homolog [Cucumis sativus]
          Length = 528

 Score =  391 bits (1004), Expect = e-106
 Identities = 206/301 (68%), Positives = 230/301 (76%)
 Frame = +3

Query: 3    PYAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXXAATLLRCMTTYILIVRQMNM 182
            PYAQAILI+G ACILELLAE                     AT  RCMT YIL+VR  NM
Sbjct: 132  PYAQAILINGCACILELLAEPLYILSQTLLLLKLRLLVETMATFSRCMTMYILLVRGSNM 191

Query: 183  EKEIVFALSQIAYGACXXXXXXXXXXXXRIVRSSNLIPFRMGNMLDLDGKLLHMCMLFTG 362
            EK I+FALSQ AYGAC            R  + S+L PFR+GNM D D KL +MC+LFT 
Sbjct: 192  EKGIIFALSQSAYGACLFLGYWVYFLNFRAFKWSDLFPFRVGNMKDFDKKLSNMCILFTL 251

Query: 363  QSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARFASG 542
            QSFRKLVLQEGEKM+LVW DTP+NQAVYGLVDKLGSLVVRLVFLPFEESSY TFAR ASG
Sbjct: 252  QSFRKLVLQEGEKMVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYTTFARSASG 311

Query: 543  QNPCGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRYYC 722
            + P   RKLA  L+EALKLV+LIGL+ MAFGPSYSYALIR+LYG KWSDGEA  ALRYYC
Sbjct: 312  EYPDKTRKLAICLSEALKLVVLIGLIFMAFGPSYSYALIRLLYGQKWSDGEAPTALRYYC 371

Query: 723  LYVIVLAMNGTSEAFLHAVATDNQLKRSNDYLLIFSVIYIVLNIRLIRFAGAVGLIAANS 902
            LY+IVLAMNGTSEAFLHAVA ++QLK+SND LL+FS IY++LN  LIR +G VGLI ANS
Sbjct: 372  LYIIVLAMNGTSEAFLHAVANESQLKKSNDSLLLFSFIYVMLNFLLIRSSGVVGLIFANS 431

Query: 903  L 905
            +
Sbjct: 432  I 432


>ref|XP_002871280.1| hypothetical protein ARALYDRAFT_325378 [Arabidopsis lyrata subsp.
           lyrata] gi|297317117|gb|EFH47539.1| hypothetical protein
           ARALYDRAFT_325378 [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score =  387 bits (994), Expect = e-105
 Identities = 197/300 (65%), Positives = 229/300 (76%)
 Frame = +3

Query: 6   YAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXXAATLLRCMTTYILIVRQMNME 185
           YAQAILIHGFAC+LEL+AE                    AAT  RC+T + LIV Q NME
Sbjct: 80  YAQAILIHGFACVLELMAEPLYILSQTLVKLELRLFVEIAATFARCVTLWSLIVNQTNME 139

Query: 186 KEIVFALSQIAYGACXXXXXXXXXXXXRIVRSSNLIPFRMGNMLDLDGKLLHMCMLFTGQ 365
           K IVFALSQ+AYG               ++RSS+L PFR GN +D D KL +MCMLFT Q
Sbjct: 140 KGIVFALSQVAYGGSLFLGYWAYFLICGVLRSSDLFPFRPGNFMDFDNKLSNMCMLFTFQ 199

Query: 366 SFRKLVLQEGEKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARFASGQ 545
           SFRKL+LQEGEK++LVW DTP+NQAVYG+VDKLG+LVVR+VF PFEE+SY  FARFASG 
Sbjct: 200 SFRKLILQEGEKLVLVWLDTPYNQAVYGIVDKLGNLVVRMVFFPFEETSYTIFARFASGD 259

Query: 546 NPCGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRYYCL 725
                +KL   LTEALKLV+LIGL+ MAFGPSYSY+LIR+LYG KWSDGEAS AL++YCL
Sbjct: 260 YQERKKKLGIGLTEALKLVILIGLIFMAFGPSYSYSLIRLLYGEKWSDGEASLALQFYCL 319

Query: 726 YVIVLAMNGTSEAFLHAVATDNQLKRSNDYLLIFSVIYIVLNIRLIRFAGAVGLIAANSL 905
           Y+IVLAMNGTSEAFLHAV T+N+LKRSND LL+FS+IY+ LNI LIR AGA+GLI ANSL
Sbjct: 320 YIIVLAMNGTSEAFLHAVGTENELKRSNDMLLVFSLIYVALNILLIRSAGAIGLIMANSL 379


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