BLASTX nr result

ID: Coptis21_contig00009592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009592
         (1351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272498.1| PREDICTED: biotin/lipoate A/B protein ligase...   345   2e-92
ref|XP_002529793.1| lipoate-protein ligase B, putative [Ricinus ...   344   3e-92
ref|XP_004135053.1| PREDICTED: plastidial lipoyltransferase 2-li...   339   1e-90
gb|AAD46029.1|AC007519_14 F16N3.14 [Arabidopsis thaliana]             334   4e-89
ref|NP_001185164.1| biotin/lipoate A/B protein ligase family pro...   334   4e-89

>ref|XP_002272498.1| PREDICTED: biotin/lipoate A/B protein ligase family-like [Vitis
           vinifera] gi|296086674|emb|CBI32309.3| unnamed protein
           product [Vitis vinifera]
          Length = 290

 Score =  345 bits (885), Expect = 2e-92
 Identities = 173/269 (64%), Positives = 205/269 (76%), Gaps = 11/269 (4%)
 Frame = +3

Query: 204 TSPPNSRAHKTISNPSQATT----------RKCEYFDLHKEVIPYNKAWEWQKSIVKQRQ 353
           T P     +  +S  SQA+           R CE FDL+ E++PY +AW WQKSIVK+++
Sbjct: 19  TRPYTPHLNAVLSKLSQASQFSISVTYKEKRLCECFDLYNELVPYGEAWSWQKSIVKEKK 78

Query: 354 CLIDLDEDCSDTLIILQHPPVYTLGAASSEEFLKFDRNSTSYDVYKTERGGEVTYHGPGQ 533
            LI  +++CSD LIILQHPPV+TLG  SSEE++ F+     YDVY+TERGGEVTYHGPGQ
Sbjct: 79  ALIQRNQNCSDALIILQHPPVFTLGTGSSEEYMNFEIIDAPYDVYRTERGGEVTYHGPGQ 138

Query: 534 IVMYPIVNLRYHKMDLHWYLRTLEEVVIRVLSLTFCIKASRLEGLTGVWVGNQKLAAIGI 713
           +VMYPI+NLR HKMDLHWYLR LEEVVIRVLS TF IKASRLEG TGVWVG+QKLAAIGI
Sbjct: 139 LVMYPIINLRNHKMDLHWYLRALEEVVIRVLSTTFSIKASRLEGFTGVWVGDQKLAAIGI 198

Query: 714 RVSRWVTYHGLALNVTTDLSPFQQIVPCGIRNREVGSIMRLLEASSSPNGIGKDTIS-AE 890
           RVS+W+ YHGLALNVTTDL+PFQ IVPCGIRNR++GSI  +L    S N  G   I+  +
Sbjct: 199 RVSQWIAYHGLALNVTTDLTPFQLIVPCGIRNRKIGSIKGILGEFGSSNRCGASDINYID 258

Query: 891 ACQLLDITYKSLLKEFSEVFQLALYHKPI 977
             QL+DIT+KSL+KEFSEVFQL L  KPI
Sbjct: 259 DFQLIDITHKSLIKEFSEVFQLELALKPI 287


>ref|XP_002529793.1| lipoate-protein ligase B, putative [Ricinus communis]
            gi|223530737|gb|EEF32607.1| lipoate-protein ligase B,
            putative [Ricinus communis]
          Length = 303

 Score =  344 bits (882), Expect = 3e-92
 Identities = 167/256 (65%), Positives = 201/256 (78%), Gaps = 1/256 (0%)
 Frame = +3

Query: 237  ISNPSQATTRKCEYFDLHKEVIPYNKAWEWQKSIVKQRQCLIDLDEDCSDTLIILQHPPV 416
            +SN   +  R CE FDL KEV+PY  AW+WQK IV++++ LI+ +E+C DTLI+LQH PV
Sbjct: 34   VSNQRASDWRACELFDLCKEVVPYGNAWDWQKEIVREKKALIERNEECPDTLIVLQHRPV 93

Query: 417  YTLGAASSEEFLKFDRNSTSYDVYKTERGGEVTYHGPGQIVMYPIVNLRYHKMDLHWYLR 596
            YTLGA SS  FL FD N   ++VY+ ERGGEVTYHGPGQ+VMYPI+NLR HKMDLHWYLR
Sbjct: 94   YTLGAGSSVGFLNFDVNDAPFEVYRIERGGEVTYHGPGQVVMYPIINLRNHKMDLHWYLR 153

Query: 597  TLEEVVIRVLSLTFCIKASRLEGLTGVWVGNQKLAAIGIRVSRWVTYHGLALNVTTDLSP 776
            TLEEVVIRVLS TF I+ASR+EGLTGVW G+QKLAAIG++VSRW+TYHGLALNVTTDL P
Sbjct: 154  TLEEVVIRVLSSTFSIQASRIEGLTGVWAGDQKLAAIGVKVSRWITYHGLALNVTTDLEP 213

Query: 777  FQQIVPCGIRNREVGSIMRLLEASSSPNGIGK-DTISAEACQLLDITYKSLLKEFSEVFQ 953
            F  IVPCGIRNR+VGSI  LL+   S NG    D    +  +L+DIT KSL++EFSEVFQ
Sbjct: 214  FNWIVPCGIRNRKVGSIKGLLQKVQSCNGRHTIDMPQLDDLKLIDITCKSLIREFSEVFQ 273

Query: 954  LALYHKPICNVNLLEQ 1001
            L + HK   +V  +E+
Sbjct: 274  LKICHKTTSDVEFMEK 289


>ref|XP_004135053.1| PREDICTED: plastidial lipoyltransferase 2-like [Cucumis sativus]
            gi|449506341|ref|XP_004162721.1| PREDICTED: plastidial
            lipoyltransferase 2-like [Cucumis sativus]
          Length = 301

 Score =  339 bits (869), Expect = 1e-90
 Identities = 163/259 (62%), Positives = 201/259 (77%), Gaps = 2/259 (0%)
 Frame = +3

Query: 240  SNPSQATTRKCEYFDLHKEVIPYNKAWEWQKSIVKQRQCLIDLDEDCSDTLIILQHPPVY 419
            S P  A  + CE FDLH+ +IPY  AW WQK IV+++  LID ++DC DTLI+LQH PVY
Sbjct: 47   SLPLNARPKSCECFDLHQNLIPYGDAWSWQKEIVREKVGLIDANQDCPDTLIVLQHHPVY 106

Query: 420  TLGAASSEEFLKFDRNSTSYDVYKTERGGEVTYHGPGQIVMYPIVNLRYHKMDLHWYLRT 599
            T+G  S+EE+L FD N + + +Y+TERGGEVTYHGPGQ+VMYPI+NLR HKMDLHWYLR 
Sbjct: 107  TMGTNSTEEYLNFDLNDSPFPIYRTERGGEVTYHGPGQLVMYPILNLRNHKMDLHWYLRA 166

Query: 600  LEEVVIRVLSLTFCIKASRLEGLTGVWVGNQKLAAIGIRVSRWVTYHGLALNVTTDLSPF 779
            LEEVVIRVLS TF I A R++GLTGVW GNQKLAAIGIRVS+W+ +HGLALNVTTDL+PF
Sbjct: 167  LEEVVIRVLSSTFSINAHRIDGLTGVWAGNQKLAAIGIRVSKWIAFHGLALNVTTDLTPF 226

Query: 780  QQIVPCGIRNREVGSIMRLLEASSSPNGIGKDTISAEACQLLDITYKSLLKEFSEVFQLA 959
              IVPCGI+NR+VG+I  LL       G  KD+      QL+DIT+++L++EFSEVFQL 
Sbjct: 227  NWIVPCGIQNRKVGNIKELLREVDLHTGFQKDS------QLIDITFEALIQEFSEVFQLD 280

Query: 960  LYHKPICNVNLLEQ--NSP 1010
            +YHK I ++  L+Q  NSP
Sbjct: 281  IYHKTIPSLEFLKQIPNSP 299


>gb|AAD46029.1|AC007519_14 F16N3.14 [Arabidopsis thaliana]
          Length = 571

 Score =  334 bits (856), Expect = 4e-89
 Identities = 169/286 (59%), Positives = 206/286 (72%)
 Frame = +3

Query: 105 TSTNSHHHCHSYFY*ITQQMIITHLSSNPIFLITSPPNSRAHKTISNPSQATTRKCEYFD 284
           T+   HHH H           ++  + N +       NS+ H   +NP     RKCE FD
Sbjct: 11  TNPKLHHHHH-----------LSDFNRNRVSTSLKIMNSKNH---TNP-----RKCECFD 51

Query: 285 LHKEVIPYNKAWEWQKSIVKQRQCLIDLDEDCSDTLIILQHPPVYTLGAASSEEFLKFDR 464
           L+ ++IPY KAW WQKSI+ +++ LID +++CSD+LIILQHP VYT+G  SSE +L FD 
Sbjct: 52  LYDQLIPYKKAWSWQKSILNEKKALIDKNQECSDSLIILQHPSVYTMGTGSSENYLNFDI 111

Query: 465 NSTSYDVYKTERGGEVTYHGPGQIVMYPIVNLRYHKMDLHWYLRTLEEVVIRVLSLTFCI 644
            +  +DVY+TERGGEVTYHGPGQ+VMYPI+NLR HKMDLHWYLR LEEVVIRVLS  F I
Sbjct: 112 KNAPFDVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHWYLRKLEEVVIRVLSSAFAI 171

Query: 645 KASRLEGLTGVWVGNQKLAAIGIRVSRWVTYHGLALNVTTDLSPFQQIVPCGIRNREVGS 824
            ASRL+G TGVWVGN+K+AAIGIRVS+W+TYHGLALNVTTDL+PF  IVPCGIRNR VGS
Sbjct: 172 NASRLDGFTGVWVGNKKMAAIGIRVSKWMTYHGLALNVTTDLTPFNSIVPCGIRNRGVGS 231

Query: 825 IMRLLEASSSPNGIGKDTISAEACQLLDITYKSLLKEFSEVFQLAL 962
           +  L+E     N +       E  QLLDI ++SLLKEFSEVFQL +
Sbjct: 232 VKGLIEDGEHYNKL-------EDLQLLDIAHESLLKEFSEVFQLQM 270


>ref|NP_001185164.1| biotin/lipoate A/B protein ligase family protein [Arabidopsis
           thaliana] gi|193806055|sp|P0C7R2.1|LIPBL_ARATH RecName:
           Full=Putative lipoyltransferase-like protein,
           chloroplastic; AltName: Full=Lipoate-protein ligase-like
           protein; AltName:
           Full=Lipoyl-[acyl-carrier-protein]-protein-N-
           lipoyltransferase-like protein; Flags: Precursor
           gi|332194068|gb|AEE32189.1| biotin/lipoate A/B protein
           ligase family protein [Arabidopsis thaliana]
          Length = 280

 Score =  334 bits (856), Expect = 4e-89
 Identities = 169/286 (59%), Positives = 206/286 (72%)
 Frame = +3

Query: 105 TSTNSHHHCHSYFY*ITQQMIITHLSSNPIFLITSPPNSRAHKTISNPSQATTRKCEYFD 284
           T+   HHH H           ++  + N +       NS+ H   +NP     RKCE FD
Sbjct: 11  TNPKLHHHHH-----------LSDFNRNRVSTSLKIMNSKNH---TNP-----RKCECFD 51

Query: 285 LHKEVIPYNKAWEWQKSIVKQRQCLIDLDEDCSDTLIILQHPPVYTLGAASSEEFLKFDR 464
           L+ ++IPY KAW WQKSI+ +++ LID +++CSD+LIILQHP VYT+G  SSE +L FD 
Sbjct: 52  LYDQLIPYKKAWSWQKSILNEKKALIDKNQECSDSLIILQHPSVYTMGTGSSENYLNFDI 111

Query: 465 NSTSYDVYKTERGGEVTYHGPGQIVMYPIVNLRYHKMDLHWYLRTLEEVVIRVLSLTFCI 644
            +  +DVY+TERGGEVTYHGPGQ+VMYPI+NLR HKMDLHWYLR LEEVVIRVLS  F I
Sbjct: 112 KNAPFDVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHWYLRKLEEVVIRVLSSAFAI 171

Query: 645 KASRLEGLTGVWVGNQKLAAIGIRVSRWVTYHGLALNVTTDLSPFQQIVPCGIRNREVGS 824
            ASRL+G TGVWVGN+K+AAIGIRVS+W+TYHGLALNVTTDL+PF  IVPCGIRNR VGS
Sbjct: 172 NASRLDGFTGVWVGNKKMAAIGIRVSKWMTYHGLALNVTTDLTPFNSIVPCGIRNRGVGS 231

Query: 825 IMRLLEASSSPNGIGKDTISAEACQLLDITYKSLLKEFSEVFQLAL 962
           +  L+E     N +       E  QLLDI ++SLLKEFSEVFQL +
Sbjct: 232 VKGLIEDGEHYNKL-------EDLQLLDIAHESLLKEFSEVFQLQM 270


Top