BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009560
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300266.1| predicted protein [Populus trichocarpa] gi|2...   550   e-154
ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methy...   549   e-154
ref|XP_004136937.1| PREDICTED: dual-specificity RNA methyltransf...   521   e-145
ref|XP_003558557.1| PREDICTED: ribosomal RNA large subunit methy...   511   e-142
gb|EEC74707.1| hypothetical protein OsI_10424 [Oryza sativa Indi...   505   e-141

>ref|XP_002300266.1| predicted protein [Populus trichocarpa] gi|222847524|gb|EEE85071.1|
            predicted protein [Populus trichocarpa]
          Length = 373

 Score =  550 bits (1416), Expect = e-154
 Identities = 270/370 (72%), Positives = 316/370 (85%)
 Frame = +3

Query: 12   MAFRSVFDFGSIKNEFEKAEINTNFIPLIWKYVIQNPNCELSEVPSLPARAHAXXXXXXX 191
            M   S+FD   ++ EFEKA INT+FIP IWKYVI+NPNCE  ++P LP+ A++       
Sbjct: 1    MGVGSIFDGPDVRAEFEKAGINTHFIPFIWKYVIKNPNCEWDDIPDLPSAAYSLLRSKFK 60

Query: 192  XXXXXVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDSRLGTYGGKPRPGGPRATLCVS 371
                 VDSV+ SND VTTKLLVKLQNGA+VEAVIMRYD+RLG Y GKPRPGGPR+TLC+S
Sbjct: 61   TSTSSVDSVINSNDGVTTKLLVKLQNGAFVEAVIMRYDTRLGKYCGKPRPGGPRSTLCIS 120

Query: 372  SQVGCKMGCKFCATGSMGFKNNLTSGEIVEQLVHASHLCQIRNIVFMGMGEPMNNYTSVV 551
            SQVGCKMGCKFCATGSMGFKNNL+SGEIVEQLVHAS L QIRN+VFMGMGEP+NNY+++V
Sbjct: 121  SQVGCKMGCKFCATGSMGFKNNLSSGEIVEQLVHASCLSQIRNVVFMGMGEPLNNYSALV 180

Query: 552  EAVRTITAFPFQISPKRVTISTVGIIHAINKLWDDLPTVNLAVSLHAPIQDLRCQIMPAA 731
            EAVR ++  PFQ+SPKR+T+STVGIIHAINKL  DLP +NLAVSLHAP+QD+RCQIMPAA
Sbjct: 181  EAVRAMSGVPFQLSPKRITVSTVGIIHAINKLHKDLPGLNLAVSLHAPVQDVRCQIMPAA 240

Query: 732  RAFPLEKLMNSLRLYQKNSKQKIFVEYIMLAGINDDKEHAHQLGKLLEMLQVVVNLIPFN 911
            RAFPLEKLM++L++YQKNS QKIF+EYIML G+ND+++HAHQLGKLLE   VVVNLIPFN
Sbjct: 241  RAFPLEKLMDALQVYQKNSMQKIFIEYIMLDGVNDEEQHAHQLGKLLETFDVVVNLIPFN 300

Query: 912  PIGSLSCFRTSNEQSVITFQKILRGVYNIRTTIRKEMGQDISGACGQLVVNLPVKGSLDT 1091
            PIGSLS FRTS+E+ V+ FQKILRGV NIRTT+RK+MGQDISGACGQLVVNLP +     
Sbjct: 301  PIGSLSQFRTSSEEKVLRFQKILRGVNNIRTTVRKQMGQDISGACGQLVVNLPDE-KKPP 359

Query: 1092 SSSLTDIEDL 1121
            +  +TDIEDL
Sbjct: 360  NLGVTDIEDL 369


>ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methyltransferase N [Vitis
            vinifera] gi|147817733|emb|CAN60150.1| hypothetical
            protein VITISV_044331 [Vitis vinifera]
            gi|296083052|emb|CBI22456.3| unnamed protein product
            [Vitis vinifera]
          Length = 372

 Score =  549 bits (1414), Expect = e-154
 Identities = 261/372 (70%), Positives = 314/372 (84%)
 Frame = +3

Query: 12   MAFRSVFDFGSIKNEFEKAEINTNFIPLIWKYVIQNPNCELSEVPSLPARAHAXXXXXXX 191
            MA  S+FD G ++ +F  A I+ NFIP IWKYV+QNPNC+  ++ SLP+ A+        
Sbjct: 1    MAISSIFDGGELRRQFHSAGISPNFIPFIWKYVVQNPNCDWDDITSLPSAAYPLLRSHFK 60

Query: 192  XXXXXVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDSRLGTYGGKPRPGGPRATLCVS 371
                 + +V++S+DNVTTKLL+KLQNG++VEAVIMRYD+RLG YGGKPRPGGPR+TLC+S
Sbjct: 61   PSTSSLHTVIDSSDNVTTKLLIKLQNGSFVEAVIMRYDTRLGKYGGKPRPGGPRSTLCIS 120

Query: 372  SQVGCKMGCKFCATGSMGFKNNLTSGEIVEQLVHASHLCQIRNIVFMGMGEPMNNYTSVV 551
            SQVGCKMGCKFCATGSMGFK+NL+SGEIVEQLVHASH  QIRN+VFMGMGEP+NNY+++V
Sbjct: 121  SQVGCKMGCKFCATGSMGFKSNLSSGEIVEQLVHASHFSQIRNVVFMGMGEPLNNYSALV 180

Query: 552  EAVRTITAFPFQISPKRVTISTVGIIHAINKLWDDLPTVNLAVSLHAPIQDLRCQIMPAA 731
            EA+  +   PFQ+SPK++T+STVGIIHAINKL  DLP +NLAVSLHAP+QD+RCQIMPAA
Sbjct: 181  EAIHIMQGSPFQLSPKKITVSTVGIIHAINKLQSDLPNLNLAVSLHAPVQDIRCQIMPAA 240

Query: 732  RAFPLEKLMNSLRLYQKNSKQKIFVEYIMLAGINDDKEHAHQLGKLLEMLQVVVNLIPFN 911
            RAFPLEKLM++LR YQ NS QKIF+EYIML  +ND+++HAHQLGKLLE  QVVVNLIPFN
Sbjct: 241  RAFPLEKLMDTLRTYQTNSGQKIFIEYIMLDEVNDEEQHAHQLGKLLETFQVVVNLIPFN 300

Query: 912  PIGSLSCFRTSNEQSVITFQKILRGVYNIRTTIRKEMGQDISGACGQLVVNLPVKGSLDT 1091
            PIG+LS F+TS+EQ V  FQKILRG YNIRTT+RK+MGQDISGACGQLVVN P K S  +
Sbjct: 301  PIGNLSYFKTSSEQKVARFQKILRGTYNIRTTVRKQMGQDISGACGQLVVNQPDKRSTGS 360

Query: 1092 SSSLTDIEDLHI 1127
            +  LTDIEDLH+
Sbjct: 361  AGLLTDIEDLHL 372


>ref|XP_004136937.1| PREDICTED: dual-specificity RNA methyltransferase RlmN 1-like
            [Cucumis sativus] gi|449495695|ref|XP_004159917.1|
            PREDICTED: dual-specificity RNA methyltransferase RlmN
            1-like [Cucumis sativus]
          Length = 384

 Score =  521 bits (1342), Expect = e-145
 Identities = 258/381 (67%), Positives = 311/381 (81%), Gaps = 11/381 (2%)
 Frame = +3

Query: 18   FRSVFDFGSIKNEFEKAEINTNFIPLIWKYVIQNPNCELSE-----------VPSLPARA 164
            FRS FD G ++ EFEKA I T FIP IWK+++ +PN   +            VPSLP+ A
Sbjct: 4    FRSAFDAGELRTEFEKAGIKTTFIPFIWKHLLHDPNNIFNHNLASEFQWEQVVPSLPSAA 63

Query: 165  HAXXXXXXXXXXXXVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDSRLGTYGGKPRPG 344
            ++            V SV++S+D VTTKLL+KLQ+GA+VEAVIMRYD+RLG YGGKPRPG
Sbjct: 64   YSLLRLKFKPLTSTVHSVVDSSDQVTTKLLIKLQSGAFVEAVIMRYDTRLGKYGGKPRPG 123

Query: 345  GPRATLCVSSQVGCKMGCKFCATGSMGFKNNLTSGEIVEQLVHASHLCQIRNIVFMGMGE 524
            G R+TLC+SSQVGCKMGC+FCATG+MGFK+NLTSGEIVEQLVHAS   QIRNIVFMGMGE
Sbjct: 124  GLRSTLCISSQVGCKMGCRFCATGTMGFKSNLTSGEIVEQLVHASRFSQIRNIVFMGMGE 183

Query: 525  PMNNYTSVVEAVRTITAFPFQISPKRVTISTVGIIHAINKLWDDLPTVNLAVSLHAPIQD 704
            P+NNY+S+VEAVR + A PF +SPKR+TISTVGIIHAINKL  DLP +NLAVSLHAP+QD
Sbjct: 184  PLNNYSSLVEAVRAMMAPPFLLSPKRITISTVGIIHAINKLHSDLPGLNLAVSLHAPVQD 243

Query: 705  LRCQIMPAARAFPLEKLMNSLRLYQKNSKQKIFVEYIMLAGINDDKEHAHQLGKLLEMLQ 884
            +RCQIMPAARAFPL+KLM++L+ YQK S+QKI +EYIML G+ND+++HAHQLGKLLE  Q
Sbjct: 244  IRCQIMPAARAFPLQKLMDALQEYQKKSQQKILIEYIMLDGVNDEEQHAHQLGKLLETFQ 303

Query: 885  VVVNLIPFNPIGSLSCFRTSNEQSVITFQKILRGVYNIRTTIRKEMGQDISGACGQLVVN 1064
            V+VNLIPFNPIGS S F+TS+++ V  FQ++LRG YNIRTTIRK+MGQDISGACGQLVV+
Sbjct: 304  VIVNLIPFNPIGSSSQFKTSSDEKVSVFQQVLRGTYNIRTTIRKQMGQDISGACGQLVVS 363

Query: 1065 LPVKGSLDTSSSLTDIEDLHI 1127
            LP + S   SS + DIEDLH+
Sbjct: 364  LPNRSSSKQSSVVPDIEDLHL 384


>ref|XP_003558557.1| PREDICTED: ribosomal RNA large subunit methyltransferase N 2-like
            [Brachypodium distachyon]
          Length = 382

 Score =  511 bits (1316), Expect = e-142
 Identities = 253/370 (68%), Positives = 303/370 (81%), Gaps = 1/370 (0%)
 Frame = +3

Query: 21   RSVFDFGSIKNEFEKAEINTNFIPLIWKYVIQNPNC-ELSEVPSLPARAHAXXXXXXXXX 197
            RSVFD   I+ EF+ A I+ +FIPLIWKYV+QNP C +L  VPSLPA A+A         
Sbjct: 13   RSVFDAAYIRAEFDGAGISPHFIPLIWKYVLQNPRCGDLDGVPSLPAAAYALLRNKFRPT 72

Query: 198  XXXVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDSRLGTYGGKPRPGGPRATLCVSSQ 377
               + +  ES D  TTKLL++LQNG  VEAV+MRYD+RLG Y GKPRPGG R+TLCVSSQ
Sbjct: 73   TSTLTAAAESKDRTTTKLLIRLQNGESVEAVVMRYDTRLGKYDGKPRPGGVRSTLCVSSQ 132

Query: 378  VGCKMGCKFCATGSMGFKNNLTSGEIVEQLVHASHLCQIRNIVFMGMGEPMNNYTSVVEA 557
            VGCKMGC+FCATG+MGFK+NL+SGEIVEQLVHAS   QIRN+VFMGMGEP+NNYT+VVEA
Sbjct: 133  VGCKMGCRFCATGTMGFKSNLSSGEIVEQLVHASRYSQIRNVVFMGMGEPLNNYTAVVEA 192

Query: 558  VRTITAFPFQISPKRVTISTVGIIHAINKLWDDLPTVNLAVSLHAPIQDLRCQIMPAARA 737
            +  +T  PFQ+SPKR+T+STVGIIH+INK  +DLP +NLAVSLHAP QD+RCQIMPAARA
Sbjct: 193  IHVLTGPPFQLSPKRITVSTVGIIHSINKFNNDLPNINLAVSLHAPDQDIRCQIMPAARA 252

Query: 738  FPLEKLMNSLRLYQKNSKQKIFVEYIMLAGINDDKEHAHQLGKLLEMLQVVVNLIPFNPI 917
            FPL KLMN+L+ YQ  SKQ IF+EYIML G+ND ++HAHQLGKLLE  + VVNLIPFNPI
Sbjct: 253  FPLGKLMNALQSYQNESKQTIFIEYIMLDGVNDQEQHAHQLGKLLETFKAVVNLIPFNPI 312

Query: 918  GSLSCFRTSNEQSVITFQKILRGVYNIRTTIRKEMGQDISGACGQLVVNLPVKGSLDTSS 1097
            GS S F+TS++QSV  FQK+LRGVY+IRTT+R+EMGQDI+GACGQLVV+LP + S   ++
Sbjct: 313  GSSSNFKTSSDQSVKKFQKVLRGVYSIRTTVRQEMGQDIAGACGQLVVSLPDERSAGGAT 372

Query: 1098 SLTDIEDLHI 1127
             L+DIEDL I
Sbjct: 373  LLSDIEDLRI 382


>gb|EEC74707.1| hypothetical protein OsI_10424 [Oryza sativa Indica Group]
          Length = 388

 Score =  505 bits (1301), Expect = e-141
 Identities = 249/370 (67%), Positives = 302/370 (81%), Gaps = 1/370 (0%)
 Frame = +3

Query: 21   RSVFDFGSIKNEFEKAEINTNFIPLIWKYVIQNPNC-ELSEVPSLPARAHAXXXXXXXXX 197
            RSVFD   I+ EF  A I+ +FIPLIWKYV+QNP C +L  VPSLPA A+A         
Sbjct: 19   RSVFDAAYIRAEFAAAGISPHFIPLIWKYVLQNPRCGDLDAVPSLPAAAYALLRQKFQPT 78

Query: 198  XXXVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDSRLGTYGGKPRPGGPRATLCVSSQ 377
               + +  ES D+ TTKLL++L+NG  VEAVIMRYD+RLG Y GKPRPGG R+TLCVSSQ
Sbjct: 79   TSTLTTAAESKDHTTTKLLIRLKNGESVEAVIMRYDTRLGKYDGKPRPGGVRSTLCVSSQ 138

Query: 378  VGCKMGCKFCATGSMGFKNNLTSGEIVEQLVHASHLCQIRNIVFMGMGEPMNNYTSVVEA 557
            VGCKMGC+FCATG+MGFK+NL+SGEIVEQLVHAS   QIRN+VFMGMGEP+NNYT++VEA
Sbjct: 139  VGCKMGCRFCATGTMGFKSNLSSGEIVEQLVHASRYSQIRNVVFMGMGEPLNNYTALVEA 198

Query: 558  VRTITAFPFQISPKRVTISTVGIIHAINKLWDDLPTVNLAVSLHAPIQDLRCQIMPAARA 737
            ++ +   PFQ+SPKR+T+STVGIIH+INK  +DLP +NLAVSLHAP QD+RC IMPAARA
Sbjct: 199  IQVLIGSPFQLSPKRITVSTVGIIHSINKFNNDLPNINLAVSLHAPDQDIRCHIMPAARA 258

Query: 738  FPLEKLMNSLRLYQKNSKQKIFVEYIMLAGINDDKEHAHQLGKLLEMLQVVVNLIPFNPI 917
            FPL KLMN+L+ YQ  SKQ IF+EYIML G+ND ++HAHQLGKLLEM + VVNLIPFNPI
Sbjct: 259  FPLVKLMNALQSYQNESKQTIFIEYIMLDGVNDQEQHAHQLGKLLEMFKAVVNLIPFNPI 318

Query: 918  GSLSCFRTSNEQSVITFQKILRGVYNIRTTIRKEMGQDISGACGQLVVNLPVKGSLDTSS 1097
            GS + F+TS+E +V  FQKILRG+YNIRTTIR++MGQDI+GACGQLVV+LP + S   ++
Sbjct: 319  GSSNNFKTSSEHNVKKFQKILRGIYNIRTTIRQQMGQDIAGACGQLVVSLPDERSAGGAT 378

Query: 1098 SLTDIEDLHI 1127
             L+DIED+ I
Sbjct: 379  LLSDIEDIRI 388