BLASTX nr result

ID: Coptis21_contig00009552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009552
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147963.1| PREDICTED: histone deacetylase complex subun...   207   6e-52
ref|XP_002277566.1| PREDICTED: histone deacetylase complex subun...   203   2e-50
ref|XP_002511764.1| Histone deacetylase complex subunit SAP18, p...   200   1e-49
ref|XP_002509676.1| Histone deacetylase complex subunit SAP18, p...   198   5e-49
dbj|BAJ53136.1| JHL05D22.7 [Jatropha curcas]                          197   7e-49

>ref|XP_004147963.1| PREDICTED: histone deacetylase complex subunit SAP18-like [Cucumis
           sativus] gi|449494271|ref|XP_004159498.1| PREDICTED:
           histone deacetylase complex subunit SAP18-like [Cucumis
           sativus]
          Length = 166

 Score =  207 bits (528), Expect = 6e-52
 Identities = 100/123 (81%), Positives = 114/123 (92%), Gaps = 2/123 (1%)
 Frame = +1

Query: 139 FEPVDREKTCPLLLRVFTRVGTHHTAEDFAIRGKEPKEEVQIYTWKDATLRELTELVKEV 318
           FEPVDREKTCPLLLRVFT+VG HHT EDFA+RGKEPK+EVQIYTWKDATLRELT+LVKEV
Sbjct: 44  FEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEV 103

Query: 319 DPAARRRDAKLSFAFVYPDKHGRYVLRQVGVTHS--SGRRIDDGRALADLNFQIGDYLDV 492
            P ARRR+AKLSFAFVYPDK GR+VL+QVG+THS  +GRR+DD +AL +L+FQIGDYLDV
Sbjct: 104 APEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV 163

Query: 493 AII 501
           AI+
Sbjct: 164 AIL 166


>ref|XP_002277566.1| PREDICTED: histone deacetylase complex subunit SAP18 [Vitis
           vinifera] gi|296089118|emb|CBI38821.3| unnamed protein
           product [Vitis vinifera]
          Length = 152

 Score =  203 bits (516), Expect = 2e-50
 Identities = 98/123 (79%), Positives = 113/123 (91%), Gaps = 2/123 (1%)
 Frame = +1

Query: 139 FEPVDREKTCPLLLRVFTRVGTHHTAEDFAIRGKEPKEEVQIYTWKDATLRELTELVKEV 318
           FEPVDREKTCPLLLRVFT++G HH+ EDFA+RGKEPK+EVQIYTWKDATLRELT+LVKEV
Sbjct: 30  FEPVDREKTCPLLLRVFTKIGCHHSKEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEV 89

Query: 319 DPAARRRDAKLSFAFVYPDKHGRYVLRQVGVTHS--SGRRIDDGRALADLNFQIGDYLDV 492
            PAARRRDA LSFAFVYPD +GR+VLR+VG T S  +G+R+DDG+ALA+L FQIGDYLDV
Sbjct: 90  APAARRRDAILSFAFVYPDTNGRFVLREVGKTFSYGNGKRLDDGKALAELGFQIGDYLDV 149

Query: 493 AII 501
           AI+
Sbjct: 150 AIL 152


>ref|XP_002511764.1| Histone deacetylase complex subunit SAP18, putative [Ricinus
           communis] gi|223548944|gb|EEF50433.1| Histone
           deacetylase complex subunit SAP18, putative [Ricinus
           communis]
          Length = 147

 Score =  200 bits (508), Expect = 1e-49
 Identities = 94/121 (77%), Positives = 114/121 (94%), Gaps = 1/121 (0%)
 Frame = +1

Query: 142 EPVDREKTCPLLLRVFTRVGTHHTAEDFAIRGKEPKEEVQIYTWKDATLRELTELVKEVD 321
           +PVDREKTCPLLLRVFT++G+HH+ EDFA+RGKEPK+EVQIYTWKDATLRELT+LVKEV 
Sbjct: 27  QPVDREKTCPLLLRVFTKIGSHHSKEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVA 86

Query: 322 PAARRRDAKLSFAFVYPDKHGRYVLRQVGVTHSS-GRRIDDGRALADLNFQIGDYLDVAI 498
           PAARRRDA+LSFAFVYPDK+GR+V+R+VG T+S+   ++DDG+ALA+L FQIGDYLDVAI
Sbjct: 87  PAARRRDARLSFAFVYPDKNGRFVVREVGKTYSNRSGKLDDGKALAELGFQIGDYLDVAI 146

Query: 499 I 501
           +
Sbjct: 147 L 147


>ref|XP_002509676.1| Histone deacetylase complex subunit SAP18, putative [Ricinus
           communis] gi|223549575|gb|EEF51063.1| Histone
           deacetylase complex subunit SAP18, putative [Ricinus
           communis]
          Length = 165

 Score =  198 bits (503), Expect = 5e-49
 Identities = 96/121 (79%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
 Frame = +1

Query: 142 EPVDREKTCPLLLRVFTRVGTHHTAEDFAIRGKEPKE-EVQIYTWKDATLRELTELVKEV 318
           E +DREKTCPLLLRVFT++G HH  EDFA+RGKEPK+ EVQIYTWKDATLRELT+LVKEV
Sbjct: 45  ELIDREKTCPLLLRVFTKIGNHHKMEDFAVRGKEPKDDEVQIYTWKDATLRELTDLVKEV 104

Query: 319 DPAARRRDAKLSFAFVYPDKHGRYVLRQVGVTHSSGRRIDDGRALADLNFQIGDYLDVAI 498
            P ARRR+AKLSFAFVYPDKHGR+VLR VG+THSS RR DD R+L  L FQIGDYLDVAI
Sbjct: 105 APEARRRNAKLSFAFVYPDKHGRFVLRMVGMTHSSARRPDDSRSLVQLGFQIGDYLDVAI 164

Query: 499 I 501
           +
Sbjct: 165 L 165


>dbj|BAJ53136.1| JHL05D22.7 [Jatropha curcas]
          Length = 147

 Score =  197 bits (502), Expect = 7e-49
 Identities = 94/121 (77%), Positives = 110/121 (90%), Gaps = 1/121 (0%)
 Frame = +1

Query: 142 EPVDREKTCPLLLRVFTRVGTHHTAEDFAIRGKEPKEEVQIYTWKDATLRELTELVKEVD 321
           +PVDREKTCPLLLRVFT +G HH+ E+FA+RGKEPK+EVQIYTWKDATLRELT+LVKEV 
Sbjct: 27  QPVDREKTCPLLLRVFTEIGDHHSKEEFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVA 86

Query: 322 PAARRRDAKLSFAFVYPDKHGRYVLRQVGVTHSS-GRRIDDGRALADLNFQIGDYLDVAI 498
           PAARRRDA+LSFAFVYPDKHGR+V+RQVG T S+   ++DDG+ LA+L FQIGDYLDVAI
Sbjct: 87  PAARRRDARLSFAFVYPDKHGRFVVRQVGTTISNRNGKLDDGKTLAELGFQIGDYLDVAI 146

Query: 499 I 501
           +
Sbjct: 147 M 147


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