BLASTX nr result

ID: Coptis21_contig00009484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009484
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325835.1| predicted protein [Populus trichocarpa] gi|2...   540   e-151
gb|ABK93043.1| unknown [Populus trichocarpa]                          538   e-151
ref|XP_002319163.1| predicted protein [Populus trichocarpa] gi|2...   536   e-150
gb|ABK95308.1| unknown [Populus trichocarpa]                          535   e-150
ref|XP_004141139.1| PREDICTED: T-complex protein 1 subunit theta...   535   e-149

>ref|XP_002325835.1| predicted protein [Populus trichocarpa] gi|222862710|gb|EEF00217.1|
            predicted protein [Populus trichocarpa]
          Length = 545

 Score =  540 bits (1390), Expect = e-151
 Identities = 274/326 (84%), Positives = 293/326 (89%)
 Frame = -2

Query: 1148 VRGMVLKHDAVGSIKKMEKAKIAVFVGGVDTSATETKGTVLIQSAEQLENYAKTEEAKVE 969
            VRGMVLK D VG++K++EKAK+AVFVGGVDTSATETKGTVLI SAEQLENYAKTEEAKVE
Sbjct: 220  VRGMVLKGDTVGTLKRVEKAKVAVFVGGVDTSATETKGTVLIHSAEQLENYAKTEEAKVE 279

Query: 968  ELIXXXXXXXXXXXXXXXXXGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVALLKLS 789
            ELI                 GEMALHFCERYKLMVLKISSKFELRRFCRTTGAVA+LKLS
Sbjct: 280  ELIKAVANSGAKVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAILKLS 339

Query: 788  QPNPDDLGYADSISVEEVGGARVTIVKNEENGNSISTLVLRGSTDSILDDLERAVDDGVN 609
             PNPDDLGY DSISVEE+GG RVT+V+NEE GNS+ T+VLRGSTDSILDDLERAVDDGVN
Sbjct: 340  PPNPDDLGYVDSISVEEIGGTRVTVVRNEEGGNSVCTVVLRGSTDSILDDLERAVDDGVN 399

Query: 608  TYKAMCRDSRIVPGAAATEIELARKLKEFSFRETGLDQYAIAKFAESFEMVPKTLAENAG 429
            TYKAMCRDSRIVPG AATEIELA++LKEFSF+ETGLDQYAIAKFAESFEM+PKTLAENAG
Sbjct: 400  TYKAMCRDSRIVPGGAATEIELAKRLKEFSFKETGLDQYAIAKFAESFEMIPKTLAENAG 459

Query: 428  LNSMEIISSLYAEHAAGNTKVGIDLEEGVCKDVSSLNIWDLYVTKLFALKYAADAACTVL 249
            LN+MEIISSLYA+HA+GN KVGIDLEEGVCKDVS+L IWDLYVTK FALKYA DAACTVL
Sbjct: 460  LNAMEIISSLYADHASGNIKVGIDLEEGVCKDVSTLKIWDLYVTKFFALKYATDAACTVL 519

Query: 248  RVDQIIMAKQAGGPRRDQQPGGMDED 171
            RVDQIIMAK AGGPRRD  PGGMDED
Sbjct: 520  RVDQIIMAKPAGGPRRDAAPGGMDED 545


>gb|ABK93043.1| unknown [Populus trichocarpa]
          Length = 545

 Score =  538 bits (1387), Expect = e-151
 Identities = 273/326 (83%), Positives = 293/326 (89%)
 Frame = -2

Query: 1148 VRGMVLKHDAVGSIKKMEKAKIAVFVGGVDTSATETKGTVLIQSAEQLENYAKTEEAKVE 969
            VRGMVLK D VG++K++EKAK+AVFVGGVDTSATETKGTVLI SAEQLENYAKTEEAKVE
Sbjct: 220  VRGMVLKGDTVGTLKRVEKAKVAVFVGGVDTSATETKGTVLIHSAEQLENYAKTEEAKVE 279

Query: 968  ELIXXXXXXXXXXXXXXXXXGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVALLKLS 789
            ELI                 GEMALHFCERYKLMVLKISSKFELRRFCRTTGAVA+LKLS
Sbjct: 280  ELIKAVANSGAKVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAILKLS 339

Query: 788  QPNPDDLGYADSISVEEVGGARVTIVKNEENGNSISTLVLRGSTDSILDDLERAVDDGVN 609
             PNPDDLGY DSISVEE+GG RVT+V+NEE GNS+ T+VLRGSTDSILDDLERAVDDGVN
Sbjct: 340  PPNPDDLGYVDSISVEEIGGTRVTVVRNEEGGNSVCTVVLRGSTDSILDDLERAVDDGVN 399

Query: 608  TYKAMCRDSRIVPGAAATEIELARKLKEFSFRETGLDQYAIAKFAESFEMVPKTLAENAG 429
            TYKAMCRDSRIVPG AATEIELA++LKEF+F+ETGLDQYAIAKFAESFEM+PKTLAENAG
Sbjct: 400  TYKAMCRDSRIVPGGAATEIELAKRLKEFAFKETGLDQYAIAKFAESFEMIPKTLAENAG 459

Query: 428  LNSMEIISSLYAEHAAGNTKVGIDLEEGVCKDVSSLNIWDLYVTKLFALKYAADAACTVL 249
            LN+MEIISSLYA+HA+GN KVGIDLEEGVCKDVS+L IWDLYVTK FALKYA DAACTVL
Sbjct: 460  LNAMEIISSLYADHASGNIKVGIDLEEGVCKDVSTLKIWDLYVTKFFALKYATDAACTVL 519

Query: 248  RVDQIIMAKQAGGPRRDQQPGGMDED 171
            RVDQIIMAK AGGPRRD  PGGMDED
Sbjct: 520  RVDQIIMAKPAGGPRRDAAPGGMDED 545


>ref|XP_002319163.1| predicted protein [Populus trichocarpa] gi|222857539|gb|EEE95086.1|
            predicted protein [Populus trichocarpa]
          Length = 545

 Score =  536 bits (1382), Expect = e-150
 Identities = 275/327 (84%), Positives = 294/327 (89%)
 Frame = -2

Query: 1151 IVRGMVLKHDAVGSIKKMEKAKIAVFVGGVDTSATETKGTVLIQSAEQLENYAKTEEAKV 972
            IVRGMVLK D VG+IK++EKAK+AVF GGVDTSATETKGTVLI SAEQLENYAKTEEAKV
Sbjct: 219  IVRGMVLKGDTVGTIKRVEKAKVAVFAGGVDTSATETKGTVLIHSAEQLENYAKTEEAKV 278

Query: 971  EELIXXXXXXXXXXXXXXXXXGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVALLKL 792
            EELI                 GEMALHFCERYKLMVLKISSKFELRRFCRTTGAVA+LKL
Sbjct: 279  EELIKAVAETGAKVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAILKL 338

Query: 791  SQPNPDDLGYADSISVEEVGGARVTIVKNEENGNSISTLVLRGSTDSILDDLERAVDDGV 612
            S P+PDDLG  DSISVEE+GGARVTIV+NEE GNS+ T+VLRGSTDSILDDLERAVDDGV
Sbjct: 339  SPPSPDDLGCVDSISVEEIGGARVTIVRNEEGGNSVCTVVLRGSTDSILDDLERAVDDGV 398

Query: 611  NTYKAMCRDSRIVPGAAATEIELARKLKEFSFRETGLDQYAIAKFAESFEMVPKTLAENA 432
            NTYKAMCRDSRI+PG AATEIELA++L+EFSF+ETGLDQYAIAKFAESFEM+PKTLAENA
Sbjct: 399  NTYKAMCRDSRIIPGGAATEIELAKRLREFSFKETGLDQYAIAKFAESFEMIPKTLAENA 458

Query: 431  GLNSMEIISSLYAEHAAGNTKVGIDLEEGVCKDVSSLNIWDLYVTKLFALKYAADAACTV 252
            GLN+MEIISSLYAEHA+GNTKVGIDLEEGV KDVS+ NIWDLYVTK FALKYAADAACTV
Sbjct: 459  GLNAMEIISSLYAEHASGNTKVGIDLEEGVFKDVSTTNIWDLYVTKFFALKYAADAACTV 518

Query: 251  LRVDQIIMAKQAGGPRRDQQPGGMDED 171
            LRVDQIIMAK AGGPRRD  PGGMDED
Sbjct: 519  LRVDQIIMAKPAGGPRRDAAPGGMDED 545


>gb|ABK95308.1| unknown [Populus trichocarpa]
          Length = 545

 Score =  535 bits (1378), Expect = e-150
 Identities = 274/327 (83%), Positives = 293/327 (89%)
 Frame = -2

Query: 1151 IVRGMVLKHDAVGSIKKMEKAKIAVFVGGVDTSATETKGTVLIQSAEQLENYAKTEEAKV 972
            IVRGMVLK D VG+IK++EKAK+AVF GGVDTSATETKGTVLI SAEQLENYAKTEEAKV
Sbjct: 219  IVRGMVLKGDTVGTIKRVEKAKVAVFAGGVDTSATETKGTVLIHSAEQLENYAKTEEAKV 278

Query: 971  EELIXXXXXXXXXXXXXXXXXGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVALLKL 792
            EELI                 GEMALHFCERYKLMVLKISSKFELRRFCRTTGAVA+LKL
Sbjct: 279  EELIKAVAETGAKVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAILKL 338

Query: 791  SQPNPDDLGYADSISVEEVGGARVTIVKNEENGNSISTLVLRGSTDSILDDLERAVDDGV 612
            S P+PDDLG  DSISVEE+GGARVTIV+NEE GNS+ T+VLRGSTDSILDDLERAVDDGV
Sbjct: 339  SPPSPDDLGCVDSISVEEIGGARVTIVRNEEGGNSVCTVVLRGSTDSILDDLERAVDDGV 398

Query: 611  NTYKAMCRDSRIVPGAAATEIELARKLKEFSFRETGLDQYAIAKFAESFEMVPKTLAENA 432
            NTYKAMCRDSRI+PG AATEIELA++L+EFSF+ETGLDQYAIAKFAESFEM+PKTLAENA
Sbjct: 399  NTYKAMCRDSRIIPGGAATEIELAKRLREFSFKETGLDQYAIAKFAESFEMIPKTLAENA 458

Query: 431  GLNSMEIISSLYAEHAAGNTKVGIDLEEGVCKDVSSLNIWDLYVTKLFALKYAADAACTV 252
            GLN+MEIISSLYAEHA+GNTKVGIDLEEGV KDVS+ NIWDLYVTK F LKYAADAACTV
Sbjct: 459  GLNAMEIISSLYAEHASGNTKVGIDLEEGVFKDVSTTNIWDLYVTKFFGLKYAADAACTV 518

Query: 251  LRVDQIIMAKQAGGPRRDQQPGGMDED 171
            LRVDQIIMAK AGGPRRD  PGGMDED
Sbjct: 519  LRVDQIIMAKPAGGPRRDAAPGGMDED 545


>ref|XP_004141139.1| PREDICTED: T-complex protein 1 subunit theta-like [Cucumis sativus]
          Length = 545

 Score =  535 bits (1377), Expect = e-149
 Identities = 269/327 (82%), Positives = 295/327 (90%)
 Frame = -2

Query: 1151 IVRGMVLKHDAVGSIKKMEKAKIAVFVGGVDTSATETKGTVLIQSAEQLENYAKTEEAKV 972
            +VRGMVLK DAVGSIK++EKAK+AVF GGVDTSATETKGTVLI +AE+L+NYAKTEEAKV
Sbjct: 219  VVRGMVLKSDAVGSIKRIEKAKVAVFAGGVDTSATETKGTVLIHTAEELQNYAKTEEAKV 278

Query: 971  EELIXXXXXXXXXXXXXXXXXGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVALLKL 792
            EELI                 GEMALHFCERYKLMVLKISSKFELRRFCRTTGAVA+LKL
Sbjct: 279  EELIKAVADSGAKVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAMLKL 338

Query: 791  SQPNPDDLGYADSISVEEVGGARVTIVKNEENGNSISTLVLRGSTDSILDDLERAVDDGV 612
            S PNPDDLG+ DS+SVEE+GG RVT+VKNEE GNSIST+VLRGSTDSILDDLERAVDDGV
Sbjct: 339  SPPNPDDLGHVDSVSVEEIGGVRVTVVKNEEGGNSISTVVLRGSTDSILDDLERAVDDGV 398

Query: 611  NTYKAMCRDSRIVPGAAATEIELARKLKEFSFRETGLDQYAIAKFAESFEMVPKTLAENA 432
            NTYKAM +DSR VPGAAATEIELAR++KEFSF+ETGLDQYAIAKFAESFEMVPKTL+ENA
Sbjct: 399  NTYKAMAKDSRTVPGAAATEIELARRVKEFSFKETGLDQYAIAKFAESFEMVPKTLSENA 458

Query: 431  GLNSMEIISSLYAEHAAGNTKVGIDLEEGVCKDVSSLNIWDLYVTKLFALKYAADAACTV 252
            GLN+MEIISSLYAEHA+GNT+VGIDLEEG+CKDVS++NIWDLY+TK FALKYAADA CTV
Sbjct: 459  GLNAMEIISSLYAEHASGNTRVGIDLEEGICKDVSTMNIWDLYITKFFALKYAADAVCTV 518

Query: 251  LRVDQIIMAKQAGGPRRDQQPGGMDED 171
            LRVDQIIM+K AGGPRR  QP GMDED
Sbjct: 519  LRVDQIIMSKPAGGPRRGDQPAGMDED 545


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