BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009483
         (1390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda...   453   e-125
ref|XP_004149294.1| PREDICTED: cytochrome c-type biogenesis ccda...   443   e-122
ref|XP_002531046.1| Thiol:disulfide interchange protein dsbD pre...   435   e-119
ref|XP_002330394.1| predicted protein [Populus trichocarpa] gi|2...   433   e-119
ref|NP_001240262.1| cytochrome c-type biogenesis ccda-like chlor...   426   e-117

>ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
            protein 2 [Vitis vinifera] gi|302143076|emb|CBI20371.3|
            unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  453 bits (1166), Expect = e-125
 Identities = 241/341 (70%), Positives = 274/341 (80%), Gaps = 3/341 (0%)
 Frame = -1

Query: 1186 RISSCKHHQTRTNVHMNMMKKSSTDYDVGHDVLASTDAKGNKGFLVKSLXXXXXXXXXV- 1010
            + SS KH   +  V + + K+S+   D+  D+++ +  + +  FL+K+            
Sbjct: 18   KFSSHKHETGKYKVPVRVPKRSAMAEDLTQDIVSLSKTEKSGSFLIKTAATSSAFAAANF 77

Query: 1009 --PVDSAKALTMENVEEGATSLAMLADINLGDWFGGLLYSSGQQANEAVQDQLSALSFTS 836
                D AKA  ++++ EGATS+  LAD ++GDWFGG LYS+GQQAN AVQDQLSALSFTS
Sbjct: 78   FATTDMAKAANIKDILEGATSVYTLADGSIGDWFGGFLYSAGQQANAAVQDQLSALSFTS 137

Query: 835  LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVIGNSVAFSXXXXXXXXXXXX 656
            LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK RAEVIGNSVAFS            
Sbjct: 138  LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKGRAEVIGNSVAFSLGLATTLAILGV 197

Query: 655  XASFAGKAYGQVGQGLPIAASGLAVLMGLNLLEVIELQLPSFFDTVDPRAAAANLPSSVQ 476
             ASFAGKAYGQ+GQGLP+AASGLAV+MGLNLLE+IELQLPSFF+  DPR+AAANLPSSVQ
Sbjct: 198  AASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANLPSSVQ 257

Query: 475  AYLAGLTFALAASPCSTPVLATLLGYVAASKDPLIGSSLLLTYTTGYVAPLLLAASFAGA 296
            AYLAGLTFALAASPCSTPVLATLLGYVA SKDP+IG SLLLTYTTGYVAPLLLAASFAGA
Sbjct: 258  AYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVAPLLLAASFAGA 317

Query: 295  LQSLLSFRKFSAWINPMSGALLLGGGMYTMLDRLFPMTMAM 173
            LQSLLSFRKFSAWINP SGALLLGGG+YT+LDRLFP +M M
Sbjct: 318  LQSLLSFRKFSAWINPTSGALLLGGGIYTLLDRLFPTSMVM 358


>ref|XP_004149294.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
            protein 2-like [Cucumis sativus]
            gi|449528927|ref|XP_004171453.1| PREDICTED: cytochrome
            c-type biogenesis ccda-like chloroplastic protein 2-like
            [Cucumis sativus]
          Length = 362

 Score =  443 bits (1139), Expect = e-122
 Identities = 243/361 (67%), Positives = 277/361 (76%), Gaps = 9/361 (2%)
 Frame = -1

Query: 1228 FSVNGCSSSVPNHGRISSCKHHQTRTNV-----HMNMMKKSSTDYDVGHDVLASTDAKGN 1064
            F V+   + + N  +IS+ KH  T  ++     H+  MK   T   V  D     +   N
Sbjct: 3    FLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLGTQ-SVADDQCKHIELVKN 61

Query: 1063 KG----FLVKSLXXXXXXXXXVPVDSAKALTMENVEEGATSLAMLADINLGDWFGGLLYS 896
            +     F   +          + VD+AKA T++++ EGA S+  LAD  +GDWFGG+LYS
Sbjct: 62   RNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYS 121

Query: 895  SGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEV 716
            +GQQAN AVQDQLSALSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+AEV
Sbjct: 122  AGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEV 181

Query: 715  IGNSVAFSXXXXXXXXXXXXXASFAGKAYGQVGQGLPIAASGLAVLMGLNLLEVIELQLP 536
            +GNSVAFS             ASFAGKAYGQ+GQGLP+AASGLAV+MGLNLLE+IELQLP
Sbjct: 182  VGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLP 241

Query: 535  SFFDTVDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPLIGSSLL 356
            SFF+  DPR+AAAN PSSVQAYLAGLTFALAASPCSTPVLATLLGYVA SKDP+IG SLL
Sbjct: 242  SFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSLL 301

Query: 355  LTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGALLLGGGMYTMLDRLFPMTMA 176
            LTYTTGYV PLLLAASFAGALQSLLSFRKFS+WINP+SGALLLGGG+YT LDRLFP+TMA
Sbjct: 302  LTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMA 361

Query: 175  M 173
            M
Sbjct: 362  M 362


>ref|XP_002531046.1| Thiol:disulfide interchange protein dsbD precursor, putative [Ricinus
            communis] gi|223529374|gb|EEF31339.1| Thiol:disulfide
            interchange protein dsbD precursor, putative [Ricinus
            communis]
          Length = 350

 Score =  435 bits (1119), Expect = e-119
 Identities = 231/320 (72%), Positives = 265/320 (82%), Gaps = 1/320 (0%)
 Frame = -1

Query: 1129 KKSSTDYDVGHDVLASTDAKGNKGFLVKSLXXXXXXXXXVPVDSAKALTMENVEEGATS- 953
            K SST+ ++  +VL+ +         +K++         + +D+AKA++ + + E AT  
Sbjct: 31   KLSSTNENLRRNVLSLSKNDSRCSSRIKTIATSLAVSNLINIDAAKAVSTDKLLEEATIY 90

Query: 952  LAMLADINLGDWFGGLLYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVL 773
            +  LAD  +GDW G LLYS+GQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVL
Sbjct: 91   MYTLADGGIGDWLGRLLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVL 150

Query: 772  PLTLGYIGAFGSGKSRAEVIGNSVAFSXXXXXXXXXXXXXASFAGKAYGQVGQGLPIAAS 593
            PLTLGYIGAFGSGKSRAEV+ +S+AF+             ASFAGKAYGQ+GQGLP+AAS
Sbjct: 151  PLTLGYIGAFGSGKSRAEVVADSIAFALGLATTLALLGIGASFAGKAYGQIGQGLPLAAS 210

Query: 592  GLAVLMGLNLLEVIELQLPSFFDTVDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLA 413
            GLAV+MGLNLLE+IELQLPSFF+  DPRAAAAN PSSVQAYLAGLTFALAASPCSTPVLA
Sbjct: 211  GLAVIMGLNLLEIIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLA 270

Query: 412  TLLGYVAASKDPLIGSSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGAL 233
            TLLGYVAASKDP++G SLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGAL
Sbjct: 271  TLLGYVAASKDPIVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGAL 330

Query: 232  LLGGGMYTMLDRLFPMTMAM 173
            LLGGG+YT LDRLFP++M+M
Sbjct: 331  LLGGGVYTFLDRLFPVSMSM 350


>ref|XP_002330394.1| predicted protein [Populus trichocarpa] gi|222871779|gb|EEF08910.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  433 bits (1114), Expect = e-119
 Identities = 224/265 (84%), Positives = 239/265 (90%)
 Frame = -1

Query: 967 EGATSLAMLADINLGDWFGGLLYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPC 788
           E A S+  LAD ++GDWFGG LYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPC
Sbjct: 1   EEAASVYTLADGSIGDWFGGFLYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPC 60

Query: 787 TLSVLPLTLGYIGAFGSGKSRAEVIGNSVAFSXXXXXXXXXXXXXASFAGKAYGQVGQGL 608
           TLSVLPLTLGYIGAFGSGKSRAE++G+S+AF+             ASFAGK YGQ+GQGL
Sbjct: 61  TLSVLPLTLGYIGAFGSGKSRAEIVGDSIAFALGLATTLALLGIAASFAGKTYGQIGQGL 120

Query: 607 PIAASGLAVLMGLNLLEVIELQLPSFFDTVDPRAAAANLPSSVQAYLAGLTFALAASPCS 428
           P+AASGLAV+MGLNLLEVIELQLPSFF+  DPRAAAAN PSSVQAYLAGLTFALAASPCS
Sbjct: 121 PLAASGLAVIMGLNLLEVIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCS 180

Query: 427 TPVLATLLGYVAASKDPLIGSSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP 248
           TPVLATLLGYVAASKDP++G SLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP
Sbjct: 181 TPVLATLLGYVAASKDPVVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP 240

Query: 247 MSGALLLGGGMYTMLDRLFPMTMAM 173
           MSGALLLGGG+YT LDRLFP TMAM
Sbjct: 241 MSGALLLGGGVYTFLDRLFPPTMAM 265


>ref|NP_001240262.1| cytochrome c-type biogenesis ccda-like chloroplastic protein 2-like
            [Glycine max] gi|32402380|gb|AAP81162.1| c-type
            cytochrome biogenesis protein [Glycine max]
            gi|255636862|gb|ACU18764.1| unknown [Glycine max]
          Length = 344

 Score =  426 bits (1094), Expect = e-117
 Identities = 240/357 (67%), Positives = 273/357 (76%), Gaps = 1/357 (0%)
 Frame = -1

Query: 1240 MSVIFSVNGCSSSVPNHGRISSCKHHQT-RTNVHMNMMKKSSTDYDVGHDVLASTDAKGN 1064
            MS+  S+ G  S    + RI SC  HQ  R  V +N  +K+S   +        +  K N
Sbjct: 1    MSLSMSLCGSYSLQIRNRRIVSCNLHQDGRHIVPINTHQKTSKPENC-----LRSKWKIN 55

Query: 1063 KGFLVKSLXXXXXXXXXVPVDSAKALTMENVEEGATSLAMLADINLGDWFGGLLYSSGQQ 884
               +   +          PV +AKA       E A S+  LAD +L DWFGG LYS+GQQ
Sbjct: 56   GNNIRTCIGVMTVAHLVAPV-TAKA-------EVAASIYALADGSLNDWFGGFLYSAGQQ 107

Query: 883  ANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVIGNS 704
            ANEAVQ QL++LSFTSLAVI+GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEV+G+S
Sbjct: 108  ANEAVQGQLTSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVGDS 167

Query: 703  VAFSXXXXXXXXXXXXXASFAGKAYGQVGQGLPIAASGLAVLMGLNLLEVIELQLPSFFD 524
            +AFS             ASFAGKAYGQ+GQGLP+AASGLA++MGLNLLE+IEL+LPSFFD
Sbjct: 168  IAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAIIMGLNLLEIIELRLPSFFD 227

Query: 523  TVDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPLIGSSLLLTYT 344
            + DPRAAAAN PSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDP+IG SLLLTYT
Sbjct: 228  SFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYT 287

Query: 343  TGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGALLLGGGMYTMLDRLFPMTMAM 173
            TGYV+PLLLAASFAGALQSLLSFRKFSAWINP+SGA+LLGGG+YT LDRLFP+TM M
Sbjct: 288  TGYVSPLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPVTMVM 344