BLASTX nr result

ID: Coptis21_contig00009482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009482
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279066.1| PREDICTED: calmodulin-like [Vitis vinifera]       203   4e-50
emb|CAN67470.1| hypothetical protein VITISV_037818 [Vitis vinifera]   203   4e-50
ref|XP_002312322.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44
ref|XP_002314958.1| predicted protein [Populus trichocarpa] gi|2...   175   1e-41
ref|NP_199759.1| Ca2+-binding protein 1 [Arabidopsis thaliana] g...   173   4e-41

>ref|XP_002279066.1| PREDICTED: calmodulin-like [Vitis vinifera]
          Length = 163

 Score =  203 bits (517), Expect = 4e-50
 Identities = 107/162 (66%), Positives = 127/162 (78%), Gaps = 8/162 (4%)
 Frame = -2

Query: 782 MCPSGIVTPTTTP---DFRSAFDILDIDHDGKISRDDLKTFYSGFSGSNEVTNDED-IGS 615
           MCP+G   P  T    +FR AFD+LD D DGKISR+DL++FY+GF G   V+ DE+ IGS
Sbjct: 1   MCPTGSSLPQATAVRSEFRPAFDVLDADRDGKISREDLRSFYAGFPGG--VSGDEEAIGS 58

Query: 614 MIFIADSNKDGFVEFDEFKQVLDCSKTSPVVSG----GVMEDVFKVMDRDGDGKVSFDDL 447
           M+ +ADSNKDGFVE+DEF++VL C + SP   G    GVMEDVFKVMDRDGDGKV  +DL
Sbjct: 59  MMSVADSNKDGFVEYDEFERVLGCRR-SPRNKGHGVAGVMEDVFKVMDRDGDGKVGLEDL 117

Query: 446 KSYMNWAGFSTSDEDIKTMIKLGGGDDKSGVCYEGLLKILAV 321
           KSYMNWAGFS ++EDIK MIKLGGGD+ SGV Y+GLLKILAV
Sbjct: 118 KSYMNWAGFSATEEDIKAMIKLGGGDEDSGVSYDGLLKILAV 159


>emb|CAN67470.1| hypothetical protein VITISV_037818 [Vitis vinifera]
          Length = 163

 Score =  203 bits (517), Expect = 4e-50
 Identities = 107/162 (66%), Positives = 127/162 (78%), Gaps = 8/162 (4%)
 Frame = -2

Query: 782 MCPSGIVTPTTTP---DFRSAFDILDIDHDGKISRDDLKTFYSGFSGSNEVTNDED-IGS 615
           MCP+G   P  T    +FR AFD+LD D DGKISR+DL++FY+GF G   V+ DE+ IGS
Sbjct: 1   MCPTGSSLPQATAVRSEFRPAFDVLDADRDGKISREDLRSFYAGFPGG--VSGDEEAIGS 58

Query: 614 MIFIADSNKDGFVEFDEFKQVLDCSKTSPVVSG----GVMEDVFKVMDRDGDGKVSFDDL 447
           M+ +ADSNKDGFVE+DEF++VL C + SP   G    GVMEDVFKVMDRDGDGKV  +DL
Sbjct: 59  MMSVADSNKDGFVEYDEFERVLGCRR-SPRNKGHXVAGVMEDVFKVMDRDGDGKVGLEDL 117

Query: 446 KSYMNWAGFSTSDEDIKTMIKLGGGDDKSGVCYEGLLKILAV 321
           KSYMNWAGFS ++EDIK MIKLGGGD+ SGV Y+GLLKILAV
Sbjct: 118 KSYMNWAGFSATEEDIKAMIKLGGGDEDSGVSYDGLLKILAV 159


>ref|XP_002312322.1| predicted protein [Populus trichocarpa] gi|222852142|gb|EEE89689.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  184 bits (468), Expect = 2e-44
 Identities = 100/169 (59%), Positives = 118/169 (69%), Gaps = 15/169 (8%)
 Frame = -2

Query: 782 MCPSGIVTPTTTP------DFRSAFDILDIDHDGKISRDDLKTFYSGFSGSNEVTNDEDI 621
           MCP G      T       DFR AFD+LD DHDGKIS+DDL+ FY+GFS +    +D+ I
Sbjct: 1   MCPYGTSLAAGTKRGGARSDFRPAFDVLDADHDGKISKDDLRMFYAGFSSNG--ADDDFI 58

Query: 620 GSMIFIADSNKDGFVEFDEFKQVLDC------SKTSPVVSGGVMEDVFKVMDRDGDGKVS 459
           GSM+ +AD NKDGFVE+DEF++VLD       S +S   S GVMEDVFKVMD+DGDGK+S
Sbjct: 59  GSMMSVADFNKDGFVEYDEFERVLDGASEKKKSSSSTRSSSGVMEDVFKVMDKDGDGKLS 118

Query: 458 FDDLKSYMNWAGFSTSDEDIKTMIKL---GGGDDKSGVCYEGLLKILAV 321
            DDLKSYM WAGF  SD+DIK MIKL    GG DK GV Y+  LKILA+
Sbjct: 119 VDDLKSYMQWAGFDASDDDIKAMIKLACYSGGGDKDGVTYDDFLKILAL 167


>ref|XP_002314958.1| predicted protein [Populus trichocarpa] gi|222863998|gb|EEF01129.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  175 bits (443), Expect = 1e-41
 Identities = 91/150 (60%), Positives = 112/150 (74%), Gaps = 9/150 (6%)
 Frame = -2

Query: 743 DFRSAFDILDIDHDGKISRDDLKTFYSGFSGSNEVTNDEDIGSMIFIADSNKDGFVEFDE 564
           DFR AFD+LD DHDGKIS+DDL+ FY+GFS ++   +D+ IGSM+ +AD NKDGFVE+DE
Sbjct: 20  DFRPAFDVLDADHDGKISKDDLRMFYAGFSRND--ADDDVIGSMMSVADFNKDGFVEYDE 77

Query: 563 FKQVLDCSKTSPVVS------GGVMEDVFKVMDRDGDGKVSFDDLKSYMNWAGFSTSDED 402
           F++VLD    +   S       GVMEDVFKVMD+DGDGK+S +DLKSYM WAGF   D+D
Sbjct: 78  FERVLDGFSENKETSISTRSTSGVMEDVFKVMDKDGDGKLSVEDLKSYMQWAGFDAPDDD 137

Query: 401 IKTMIKL---GGGDDKSGVCYEGLLKILAV 321
           IK MIKL    GG D+  V Y+GLLKILA+
Sbjct: 138 IKAMIKLAGCAGGGDEDVVTYDGLLKILAL 167


>ref|NP_199759.1| Ca2+-binding protein 1 [Arabidopsis thaliana]
           gi|11762204|gb|AAG40380.1|AF325028_1 AT5g49480
           [Arabidopsis thaliana]
           gi|14190413|gb|AAK55687.1|AF378884_1 AT5g49480/K6M13_2
           [Arabidopsis thaliana] gi|10177614|dbj|BAB10761.1|
           NaCl-inducible Ca2+-binding protein-like;
           calmodulin-like [Arabidopsis thaliana]
           gi|15450553|gb|AAK96454.1| AT5g49480/K6M13_2
           [Arabidopsis thaliana] gi|332008436|gb|AED95819.1|
           Ca2+-binding protein 1 [Arabidopsis thaliana]
          Length = 160

 Score =  173 bits (439), Expect = 4e-41
 Identities = 92/160 (57%), Positives = 121/160 (75%), Gaps = 9/160 (5%)
 Frame = -2

Query: 782 MCPSGIV----TPTTTPDFRSAFDILDIDHDGKISRDDLKTFYSGF-SGSNEVTNDED-I 621
           MCPSG +    T T  P+FR AF+I+D DHDGKIS DDL+ FY+G  SG N   NDE  I
Sbjct: 1   MCPSGRIAIPITTTANPNFRPAFEIIDTDHDGKISSDDLRAFYAGIPSGEN---NDETMI 57

Query: 620 GSMIFIADSNKDGFVEFDEFKQVLDCSKTSPVVSGG---VMEDVFKVMDRDGDGKVSFDD 450
           G+MI +AD+NKDGFVEFDEF++VL+ +  S   +GG   +M+DVFKVMD+DGDG++S+ D
Sbjct: 58  GTMISVADANKDGFVEFDEFEKVLETTPFSRSGNGGDDGLMKDVFKVMDKDGDGRLSYGD 117

Query: 449 LKSYMNWAGFSTSDEDIKTMIKLGGGDDKSGVCYEGLLKI 330
           LKSYM+ AG + +D++IK+MI+L GGD   GV ++GLLKI
Sbjct: 118 LKSYMDSAGLAVTDDEIKSMIRLAGGDLNDGVSFDGLLKI 157


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