BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009463
         (1850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267728.1| PREDICTED: uncharacterized protein LOC100256...   626   e-177
gb|AEI98626.1| hypothetical protein 111O18.13 [Coffea canephora]      585   e-164
ref|XP_002521582.1| RNA polymerase II transcription factor, puta...   584   e-164
ref|XP_003537577.1| PREDICTED: uncharacterized protein LOC100815...   583   e-164
ref|NP_195383.1| transcription initiation factor TFIIB [Arabidop...   568   e-159

>ref|XP_002267728.1| PREDICTED: uncharacterized protein LOC100256546 [Vitis vinifera]
          Length = 540

 Score =  626 bits (1615), Expect = e-177
 Identities = 348/557 (62%), Positives = 393/557 (70%), Gaps = 23/557 (4%)
 Frame = -3

Query: 1812 IKCPYCSSTQGRCSTTQSNQSITECTSCGRVIEERQTQPNELFLLRAQDTPLCVVTSDLA 1633
            ++CPYC++ QGRC TT S + +TECTSCGRV+EERQ+Q + LF LRAQDTPLC+VTSDL 
Sbjct: 1    MRCPYCTAAQGRCGTTGSGRLVTECTSCGRVMEERQSQIHHLFHLRAQDTPLCLVTSDLP 60

Query: 1632 XXXXXXXXXXXPNPQTDSDSED-PFESTGFISTFSTWSLEPTPLIARTSFSYSGMLAELE 1456
                          QT  + ED PFESTGFIS FSTWSL+P P+ AR+  S+SG LAELE
Sbjct: 61   PPPPQ-------QAQTAQEQEDDPFESTGFISAFSTWSLDPCPIFARSCLSFSGHLAELE 113

Query: 1455 R------------------CCSISDTSATGGVVAVDNLRAYLQIIDVSSILGLDYDISDH 1330
            R                    S S  +++G  V VDNLRAYLQIIDV+SILGLDYDI+DH
Sbjct: 114  RVLESSSSSSSSSSSSAAAAASSSSLASSGPAVVVDNLRAYLQIIDVASILGLDYDIADH 173

Query: 1329 AFELFRDCSTATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKI 1150
            AFELFRDCS+ATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAAN+PQKEIGKYIKI
Sbjct: 174  AFELFRDCSSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKI 233

Query: 1149 LGEALQLSQPINSNSIAVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISA 970
            LGEALQLSQPINSNSI+VHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISA
Sbjct: 234  LGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISA 293

Query: 969  AAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPANYTPAVPPEKAFP 790
            AAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLP+NYTPAVPPEKAFP
Sbjct: 294  AAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFP 353

Query: 789  TTAITSARALAPRVDASEVAISSDKDKQPEVEKDKKIILPEVDNLVKGKMESEVKSTTRV 610
            TTAITS R+ APRVD  E+    D+DKQPE +  K     E  +  +GK ++E K   + 
Sbjct: 354  TTAITSGRSSAPRVDLIEIVSCLDRDKQPESKPSKPNETLETSHQARGKEDTECKGNCQG 413

Query: 609  PHSSPAPIGAGNIDQQVLNRAKTFWDPQQPFKVRGFQHSVAEKDQTKDRGIDINETQFNL 430
             H+    +G        LNR  TFW    PF   GF+ S  EK+Q    G+D+NE   N 
Sbjct: 414  AHT----LG--------LNRPTTFWQLPNPFGGSGFRTS-GEKNQIVSGGMDLNEGGANP 460

Query: 429  SDFETKADKEPMDIDSLQRPPQFSGPSPSNASSHLWSFHTQLSSNSSSVKFLEPSQ---- 262
             + E K D          R  QF G  PS+ SS  W F    SS SSS  + +  Q    
Sbjct: 461  QELEQKLDNGAKAATVSVRAEQFPGAPPSSGSSITWPFRQPPSSGSSS-SYAQLMQSLKV 519

Query: 261  RSRFQGLKGVGNQNSSE 211
             S F  LKG G +   +
Sbjct: 520  ASGFPELKGSGRKGGGQ 536


>gb|AEI98626.1| hypothetical protein 111O18.13 [Coffea canephora]
          Length = 526

 Score =  585 bits (1507), Expect = e-164
 Identities = 326/547 (59%), Positives = 383/547 (70%), Gaps = 10/547 (1%)
 Frame = -3

Query: 1812 IKCPYCSSTQGRCSTTQSNQSITECTSCGRVIEERQTQPNELFLLRAQDTPLCVVTSDLA 1633
            ++CPYCS+ QGRC+TT S +SITECTSCGRV+EERQ+Q + LF +RAQD+PLC+VTSDL 
Sbjct: 1    MRCPYCSAAQGRCTTTSSGRSITECTSCGRVVEERQSQSHHLFHIRAQDSPLCLVTSDLP 60

Query: 1632 XXXXXXXXXXXPNPQTDSDSEDPFESTGFISTFSTWSLEPTPLIARTSFSYSGMLAELER 1453
                        NP ++SD +DPFE TGFI+ FSTWSLEP PL A++S S++G LAELER
Sbjct: 61   TLPVPATTDS--NPTSNSDDDDPFEPTGFITAFSTWSLEPYPLFAQSSISFAGHLAELER 118

Query: 1452 ----------CCSISDTSATGGVVAVDNLRAYLQIIDVSSILGLDYDISDHAFELFRDCS 1303
                      C S S ++++G  V VDNLRAYLQIIDV+SILGLDYDISDHAF+LFRDCS
Sbjct: 119  VLETTSSSSSCSSSSGSNSSGPSVVVDNLRAYLQIIDVASILGLDYDISDHAFQLFRDCS 178

Query: 1302 TATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLSQ 1123
            +ATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLSQ
Sbjct: 179  SATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLSQ 238

Query: 1122 PINSNSIAVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQL 943
            PINSNSI+VHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQL
Sbjct: 239  PINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQL 298

Query: 942  EDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPANYTPAVPPEKAFPTTAITSARA 763
            EDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLP+NY+P VPPEKAFP   I S R+
Sbjct: 299  EDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYSPVVPPEKAFPMATIASGRS 358

Query: 762  LAPRVDASEVAISSDKDKQPEVEKDKKIILPEVDNLVKGKMESEVKSTTRVPHSSPAPIG 583
              PR D  EV  S   DKQ E +  +   + +  ++ K K E+E + +     S P    
Sbjct: 359  STPRADLVEVPSS---DKQTESKNPRTSDVLDTCHVAKNKEETENRDSIHRSQSLP---- 411

Query: 582  AGNIDQQVLNRAKTFWDPQQPFKVRGFQHSVAEKDQTKDRGIDINETQFNLSDFETKADK 403
                    ++R    W  Q P +     ++ A+K     + +DI+      SD +  A  
Sbjct: 412  --------MHRTPILWKSQPPVR-SATVNTPADKIHNITQEMDIDPRSQTGSDEKVVA-- 460

Query: 402  EPMDIDSLQRPPQFSGPSPSNASSHLWSFHTQLSSNSSSVKFLEPSQRSRFQGLKGVGNQ 223
                  S  RP  FS P+ S+A S  W   T  S  S S + L   +     GL  +  +
Sbjct: 461  ------SSMRPVLFSAPT-SSAGSLSWPLQTTSSGFSPSGQQLVHPRNMASNGLDEMTPR 513

Query: 222  NSSEETG 202
             +  + G
Sbjct: 514  QNENKKG 520


>ref|XP_002521582.1| RNA polymerase II transcription factor, putative [Ricinus communis]
            gi|223539260|gb|EEF40853.1| RNA polymerase II
            transcription factor, putative [Ricinus communis]
          Length = 511

 Score =  584 bits (1505), Expect = e-164
 Identities = 327/546 (59%), Positives = 377/546 (69%), Gaps = 8/546 (1%)
 Frame = -3

Query: 1812 IKCPYCSSTQGRCSTTQSNQSITECTSCGRVIEERQTQPNELFLLRAQDTPLCVVTSDLA 1633
            +KCPYC + Q RC+T+ S +SI ECTSCGRV+EERQ Q   +F  RAQD PL +VTSDL 
Sbjct: 1    MKCPYCPAAQARCATSTSGRSILECTSCGRVVEERQFQQYHVFHNRAQDNPLSLVTSDLP 60

Query: 1632 XXXXXXXXXXXPNPQTDSDSEDPFESTGFISTFSTWSLEPTPLIARTSFSYSGMLAELER 1453
                         PQ + D EDPFE TGFI+ FSTWSLEP PL  R+S S+SG LAELER
Sbjct: 61   II----------QPQGEGDDEDPFEPTGFITVFSTWSLEPNPLSLRSSLSFSGHLAELER 110

Query: 1452 CCSI--SDTSATGGVVAVDNLRAYLQIIDVSSILGLDYDISDHAFELFRDCSTATCLRNR 1279
               +  S +++    V VDNLRAY+QIIDV+SILGLD DISDHAF+LFRDC +ATCLRNR
Sbjct: 111  TLELTASASNSNSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNR 170

Query: 1278 SVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLSQPINSNSIA 1099
            SVEALATAALVQAIREAQEPRTLQEISIAAN+PQKEIGKYIKILGEALQLSQPINSNSI+
Sbjct: 171  SVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSIS 230

Query: 1098 VHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQA 919
            VHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQA
Sbjct: 231  VHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQA 290

Query: 918  EICKVTGLTEVTLRKVYKELLENWDDLLPANYTPAVPPEKAFPTTAITSARALAPRVDAS 739
            EICKVTGLTEVTLRKVYKELLENWDDLLP+NYTPAVPPEKAFPTT ITS R+ APRVD  
Sbjct: 291  EICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTVITSGRSSAPRVDPV 350

Query: 738  EVAISS-DKDKQPEVEKDKKIILPEVDNLVKGKMESEVKSTTRVPHS-SPAPIGAGNIDQ 565
            EV     DKDKQP+ + +K        N V  + + +++S      S  PA         
Sbjct: 351  EVTSPPVDKDKQPDNKSNK-------TNNVLARAKEDIESNGNSRGSRGPA--------- 394

Query: 564  QVLNRAKTFWDPQQPFKVRGFQHSVAEKDQTKDRGIDINETQFNLSDFETKADKE--PMD 391
                     W   Q F+    Q   +    + ++ ++ NE Q +  +FE K DK+    +
Sbjct: 395  ---------W---QNFRQPWLQFGASGVTTSGEKNLNGNELQGSCQEFEEKVDKQIIEKE 442

Query: 390  IDSLQRPPQFSGPSPSNAS--SHLWSFHTQLSSNSSSVKFLEPSQRSRFQGLKGVGNQNS 217
            +    RP QFS P  S  S  S  W F +  +S  S +    P     +  LKG+  QN 
Sbjct: 443  LTGASRPNQFSNPPASGMSTISITWPFRSAPASGPSPIVQPPPKLAPGYAELKGISIQNG 502

Query: 216  SEETGH 199
            S    +
Sbjct: 503  SSNNAN 508


>ref|XP_003537577.1| PREDICTED: uncharacterized protein LOC100815371 [Glycine max]
          Length = 488

 Score =  583 bits (1502), Expect = e-164
 Identities = 317/521 (60%), Positives = 371/521 (71%), Gaps = 10/521 (1%)
 Frame = -3

Query: 1812 IKCPYCSSTQGRCSTTQSNQSITECTSCGRVIEERQTQPNELFLLRAQDTPLCVVTSDLA 1633
            +KCPYCS+ QGRC+TT   +SITECTSCGRV+EERQ+ P+ +F +RAQD PLC+VTSDLA
Sbjct: 1    MKCPYCSAAQGRCATTSGGRSITECTSCGRVVEERQSHPHHVFHVRAQDNPLCLVTSDLA 60

Query: 1632 XXXXXXXXXXXPNPQTDSDSEDPFESTGFISTFSTWSLEPTPLIARTSFSYSGMLAELER 1453
                            ++D EDPFE TGFI+ FSTW+LEP PL  ++S S+SG LAELER
Sbjct: 61   LPAL----------NQNNDEEDPFEPTGFITAFSTWALEPNPLYLQSSLSFSGYLAELER 110

Query: 1452 CC--------SISDTSATGGVVAVDNLRAYLQIIDVSSILGLDYDISDHAFELFRDCSTA 1297
                      S + +S++   V VDNLRAY+QIIDV+SILGLD DISDHAF+LFRDC +A
Sbjct: 111  TLESSSSSSSSFTSSSSSSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSA 170

Query: 1296 TCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLSQPI 1117
            TCLRNRSVEALATAALVQAIREAQEPRTLQEISIAAN+PQKEIGKYIKILGEALQLSQPI
Sbjct: 171  TCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPI 230

Query: 1116 NSNSIAVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLED 937
            NSNSI+VHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLED
Sbjct: 231  NSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLED 290

Query: 936  KRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPANYTPAVPPEKAFPTTAITSARALA 757
            KRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLP+NYTPAVPPE+AFPTT I S R+  
Sbjct: 291  KRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSST 350

Query: 756  PRVDASEVAISSDKDKQPEVEKDKKIILPEVDNLVKGKMESEVKSTTRVPHSSPAPIGAG 577
             +VDA EV  S D +K P+++  K    P + +  +GK E+               +G  
Sbjct: 351  AKVDAVEVISSLDPEKLPDIKHSKPNEGPGMVHHPRGKDEA---------------VGGY 395

Query: 576  NIDQQVLNRAKTFWDPQQPFKVRGFQHSVAEKDQTKDRGIDINETQFNLSDFETKADKEP 397
            +     LN+  TFW  Q P      Q+ +        +G+DI+ +Q N    E  A+   
Sbjct: 396  HASHSTLNQQSTFWQSQLPSGTHNHQNVL--------QGMDIDVSQRNHQQPEHMAEDTT 447

Query: 396  MDI--DSLQRPPQFSGPSPSNASSHLWSFHTQLSSNSSSVK 280
                  S  +  Q   P  S+ASS +  F    SS  S+V+
Sbjct: 448  NGAANGSSLKSNQLCSPPASSASSVMRQFSAPPSSGPSNVR 488


>ref|NP_195383.1| transcription initiation factor TFIIB [Arabidopsis thaliana]
            gi|2464915|emb|CAB16810.1| transcription initiation
            factor like protein [Arabidopsis thaliana]
            gi|7270613|emb|CAB80331.1| transcription initiation
            factor like protein [Arabidopsis thaliana]
            gi|16509378|emb|CAC82714.1| TFIIB-related protein
            [Arabidopsis thaliana] gi|30102720|gb|AAP21278.1|
            At4g37010 [Arabidopsis thaliana]
            gi|39545884|gb|AAR28005.1| TFIIB5/pBrp [Arabidopsis
            thaliana] gi|332661282|gb|AEE86682.1| transcription
            initiation factor TFIIB [Arabidopsis thaliana]
          Length = 503

 Score =  568 bits (1465), Expect = e-159
 Identities = 317/542 (58%), Positives = 371/542 (68%), Gaps = 5/542 (0%)
 Frame = -3

Query: 1812 IKCPYCSSTQGRCSTTQSNQSITECTSCGRVIEERQTQPNELFLLRAQDTPLCVVTSDLA 1633
            +KCPYCSS QGRC+TT S +SITEC+SCGRV+EERQTQ + LF LRAQDTPLC+VTSDL 
Sbjct: 1    MKCPYCSSAQGRCTTTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQDTPLCLVTSDLQ 60

Query: 1632 XXXXXXXXXXXPNPQTDSDSEDPFESTGFISTFSTWSLEPTPLIARTSFSYSGMLAELER 1453
                           +  D EDPFE TGFI+ FSTWSLEP+P+ AR+S S+SG LAELER
Sbjct: 61   TAAQP----------SPEDEEDPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELER 110

Query: 1452 CCSI--SDTSATGGVVAVDNLRAYLQIIDVSSILGLDYDISDHAFELFRDCSTATCLRNR 1279
               +  S +++    V VDNLRAY+QIIDV+SILGLD DIS+HAF+LFRDC +ATCLRNR
Sbjct: 111  TLELASSTSNSNSSTVVVDNLRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNR 170

Query: 1278 SVEALATAALVQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLSQPINSNSIA 1099
            SVEALATA LVQAIREAQEPRTLQEISIAAN+ QKEIGKYIKILGEALQLSQPINSNSI+
Sbjct: 171  SVEALATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSIS 230

Query: 1098 VHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQA 919
            VHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQA
Sbjct: 231  VHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQA 290

Query: 918  EICKVTGLTEVTLRKVYKELLENWDDLLPANYTPAVPPEKAFPTTAITSARALAPRVDAS 739
            EICK+TGLTEVTLRKVYKELLENWDDLLP+NYTPAVPPEKAFPTT I++ R+  PR    
Sbjct: 291  EICKITGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTISTTRSTTPR---- 346

Query: 738  EVAISSDKDKQPEVEKDKKIILPEVDNLVKGKMESEVKSTTRVPHSSPAPIGAGNIDQQV 559
                + D  +   VEKDK    P ++       + + K   +     P   G  +    V
Sbjct: 347  ----AVDPPEPSFVEKDKPSAKP-IETFDHTYQQPKGKEDKQPKFRQPWLFGTAS----V 397

Query: 558  LNRAKTFWDPQQPFKVRGFQHSVAEKDQTKDRGIDINETQFNLSDFETKADKEPMDIDSL 379
            +N A+   +P +P                    +D  + Q +    +   DKE + I   
Sbjct: 398  MNPAEMISEPAKP------------------NAMDYEKQQLDKQQQQQLGDKETLPIYLR 439

Query: 378  QRPPQFSGPSPSNASSHL-WSFHTQLSSNSSS--VKFLEPSQRSRFQGLKGVGNQNSSEE 208
               P  S PSPS   S + WSF   +   SSS       P     +  ++G G++N+   
Sbjct: 440  DHNPFPSNPSPSTGISTINWSFRPSVVPGSSSNLPVIHPPKLPPGYAEIRGSGSRNADNP 499

Query: 207  TG 202
             G
Sbjct: 500  HG 501