BLASTX nr result
ID: Coptis21_contig00009456
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009456
(2802 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29641.3| unnamed protein product [Vitis vinifera] 277 e-131
ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, pu... 282 3e-73
ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247... 281 5e-73
gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japo... 278 8e-72
sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 278 8e-72
>emb|CBI29641.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 277 bits (709), Expect(2) = e-131
Identities = 158/347 (45%), Positives = 191/347 (55%), Gaps = 8/347 (2%)
Frame = -3
Query: 1855 FLSWSD*RPLLLWAIISRICNSQS---TDEEIARSYEEFYEDVHTEFLKFGEIFNFKVCK 1685
F+ WS W + C Q+ TDEE+ R YEEFYEDV TEFLKFGEI NFKVC+
Sbjct: 257 FIWWSS----WFWPWLGWTCRRQNPLYTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCR 312
Query: 1684 NGSFHLRGNVYVHYKSLESAIHAYQAINGRYFASKQITCEFVGVTRWRVAICGEYMKSRL 1505
NGSFHLRGNVYVHYKSL+SA+ AY +ING Y+A KQ+TCEFVGVTRW+VAICGEYMKSR
Sbjct: 313 NGSFHLRGNVYVHYKSLDSAVLAYHSINGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRF 372
Query: 1504 KTCSRGTACNFIHCFQNPCGDYEWADWDNPPPRYWVEKMVALFGPSDEVGSDKHMGQEHW 1325
KTCS GTACNFIHCF+NP GDYEWADWD PPPRYWV+ MVALFG +DE G DK + QE
Sbjct: 373 KTCSHGTACNFIHCFRNPGGDYEWADWDKPPPRYWVKNMVALFGLTDESGYDKEVKQESM 432
Query: 1324 SFPRDSKKIRPKHEXXXXXXXXXXXXXXXXXXXXXXXXXRNRYLLSTPSNREEG---SAI 1154
R + +RY +RE G
Sbjct: 433 GRRRSTSN--------------------------AGTVDADRYHSRRSRSRESGYSHGEY 466
Query: 1153 SRKMIGSTDESKR--YEENSKSEDVDRYKEISIFQDHGSGDYSFKDRDKYYSRSRAHHRN 980
+R+ D K Y+ ++ D K I + ++ + F D YSRSR H+
Sbjct: 467 ARRQFDENDAHKNVYYQRHTS----DGRKRIKMHEERYEEEAHF--GDNRYSRSRIHN-- 518
Query: 979 EGRDHSDYHENVKKKHGSSDCEGKDQLHCHDSPRNYSDLGRKQKRTH 839
D + +KHG + K H ++ DLG H
Sbjct: 519 -VESDGDLEGDKSRKHGHT---RKSLKHQKEAMAVMDDLGDSNNSIH 561
Score = 221 bits (564), Expect(2) = e-131
Identities = 103/141 (73%), Positives = 117/141 (82%), Gaps = 1/141 (0%)
Frame = -1
Query: 2394 DGDWEYIEEGPAEIIWQGNEIIVKKNRVRVPKGSANTQA-SIENADRPTSNPLPPQSEAY 2218
D DWEY E GPAEIIWQGNEIIVKK RVR+ K + + E+ +RPTSNPLPPQSEA+
Sbjct: 112 DDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKKDVDQHSRKEEDTERPTSNPLPPQSEAF 170
Query: 2217 ASYKNTSVSAEQVFESVSQQTPNFGTEQDKDHCPFHIKTGACRFGVRCSRAHFYPDKSCT 2038
+ + + +S++Q+F VS+Q PNFGTEQDKDHCPFHIKTGACRFG RCSR HFYPDKSCT
Sbjct: 171 SDHNASIISSQQLFADVSEQIPNFGTEQDKDHCPFHIKTGACRFGQRCSRVHFYPDKSCT 230
Query: 2037 LLIKNMYTGPGLAWEQDEGLE 1975
LLIKNMY GPGLAWEQDEGLE
Sbjct: 231 LLIKNMYNGPGLAWEQDEGLE 251
>ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor,
small subunit, putative [Ricinus communis]
Length = 857
Score = 282 bits (722), Expect = 3e-73
Identities = 188/524 (35%), Positives = 246/524 (46%), Gaps = 6/524 (1%)
Frame = -3
Query: 1789 QSTDEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHYKSLESAIHAYQ 1610
+ TDEE+ RSYEEFYEDVHTEFLK+GEI NFKVCKN SFHLRGNVYV YKSL+SA+ AY
Sbjct: 269 EHTDEEVERSYEEFYEDVHTEFLKYGEIVNFKVCKNSSFHLRGNVYVQYKSLDSAVLAYC 328
Query: 1609 AINGRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHCFQNPCGDYEWA 1430
+INGRYFA KQ+ CEFV VTRW+VAICGEYMKSRL+ CSRGTACNFIHCF+NP GDYEWA
Sbjct: 329 SINGRYFAGKQVNCEFVNVTRWKVAICGEYMKSRLQMCSRGTACNFIHCFRNPGGDYEWA 388
Query: 1429 DWDNPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWSFPRDSKKIRPKHEXXXXXXXXXXX 1250
DWD PPPRYW+EKM ALFG SDE DK M Q+ + PR S K P +
Sbjct: 389 DWDKPPPRYWIEKMTALFGYSDESACDKQMEQDKFKQPRMSSKRIPAY-----------T 437
Query: 1249 XXXXXXXXXXXXXXRNRYLLSTPSNREEGSAISRKMIGSTDESKR---YEENSKSED--V 1085
+ + N ++ + + S D+ K+ ++E S +D +
Sbjct: 438 DRHHSSRSRSRDIYYSLHYSGKSDNEDDDEERTHRHWRSDDDRKQIHIHDEKSYRKDYHL 497
Query: 1084 DRYKEISIFQDHGSGDYSFKDRDKYYSRSRAHHRNEGRDHSDYHENVKKKHGSSDCEGKD 905
K + D G +S D + R++ H S +H V KH + GK
Sbjct: 498 SNRKSHDMISD---GGWSDGDSEADRERNKRHGHGHVTKRSKHHSEV-TKHSTHWSSGKS 553
Query: 904 QLHCHDSPRN-YSDLGRKQKRTHSSRRVHVTGRIKAEDIHAEXXXXXXXXXXXXXXXXXR 728
+ H + + +SD R ++ HV R K
Sbjct: 554 KDSNHKAASDEWSDGDSGADRERNNCHGHVAKRSK------------------------- 588
Query: 727 CDSHDSIETIDPSDRWESGTTVPCETDNSRSYSSEYNEPCEKMHRPHSQSTGVCFXXXXX 548
H S E S RW SG + + N + S E+++ + HS +
Sbjct: 589 ---HQS-EVTKHSTRWSSGKS---KDSNHQENSDEWSDGGRNGQKEHSSAEVSEHRMKGV 641
Query: 547 XXXXXXXXXXXXXXXEERESPGEDLHSREDREHYHEKRISRRGHKKDNKPLNERNSESFS 368
+ +S E HSR R H+ ++ D K N
Sbjct: 642 SLDDNRNSTSKCSGADGYQSDREKHHSRMVRSSRHQSKVRSMDDLGDGKESNR------- 694
Query: 367 SGDYRGESDIGHKEDPSVRNSGGHHMQKRSSSTDLQKDQRNRKR 236
+ D + P + S H + S +D +D R R R
Sbjct: 695 ------DEDRDRHDHPRKKRSRPH--SRSSELSDDYQDDRYRTR 730
Score = 216 bits (550), Expect = 3e-53
Identities = 101/141 (71%), Positives = 116/141 (82%), Gaps = 1/141 (0%)
Frame = -1
Query: 2394 DGDWEYIEEGPAEIIWQGNEIIVKKNRVRVPKGSANTQASIENADRPTSNPLPPQSEAYA 2215
D DWEY+EEGPAEIIWQGNEIIV+K ++ PK + Q S DRPTSNPLPPQSEA+A
Sbjct: 131 DDDWEYVEEGPAEIIWQGNEIIVRKKKI--PKKKSADQQSRNEDDRPTSNPLPPQSEAFA 188
Query: 2214 SYKNTSV-SAEQVFESVSQQTPNFGTEQDKDHCPFHIKTGACRFGVRCSRAHFYPDKSCT 2038
Y+ + SAE++ E+V+QQ PNFGTEQDK HCPFH+KTGACRFG RCSR HFYPDK+ T
Sbjct: 189 EYQKAPMPSAERMLENVAQQIPNFGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPDKANT 248
Query: 2037 LLIKNMYTGPGLAWEQDEGLE 1975
LL+KNMY GPGLAWEQDEGLE
Sbjct: 249 LLMKNMYNGPGLAWEQDEGLE 269
>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 281 bits (720), Expect = 5e-73
Identities = 186/541 (34%), Positives = 254/541 (46%), Gaps = 20/541 (3%)
Frame = -3
Query: 1783 TDEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHYKSLESAIHAYQAI 1604
TDEE+ R YEEFYEDV TEFLKFGEI NFKVC+NGSFHLRGNVYVHYKSL+SA+ AY +I
Sbjct: 256 TDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHSI 315
Query: 1603 NGRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHCFQNPCGDYEWADW 1424
NG Y+A KQ+TCEFVGVTRW+VAICGEYMKSR KTCS GTACNFIHCF+NP GDYEWADW
Sbjct: 316 NGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIHCFRNPGGDYEWADW 375
Query: 1423 DNPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWSFPRDSKKIRPKHEXXXXXXXXXXXXX 1244
D PPPRYWV+ MVALFG +DE G DK + QE R +
Sbjct: 376 DKPPPRYWVKNMVALFGLTDESGYDKEVKQESMGRRRSTSN------------------- 416
Query: 1243 XXXXXXXXXXXXRNRYLLSTPSNREEG---SAISRKMIGSTDESKR--YEENSKSEDVDR 1079
+RY +RE G +R+ D K Y+ ++ D
Sbjct: 417 -------AGTVDADRYHSRRSRSRESGYSHGEYARRQFDENDAHKNVYYQRHTS----DG 465
Query: 1078 YKEISIFQDHGSGDYSFKDRDKYYSRSRAHH--------RNEGRDHSDYHENVKKKH--- 932
K I + ++ + F D YSRSR H+ R+ RD ++++ +K
Sbjct: 466 RKRIKMHEERYEEEAHF--GDNRYSRSRIHNVESDGDLLRDGTRDRERHNDHRRKSSRQR 523
Query: 931 ----GSSDCEGKDQLHCHDSPRNYSDLGRKQKRTHSSRRVHVTGRIKAEDIHAEXXXXXX 764
S D G+ + +DS ++SD + R H R + + +A + +
Sbjct: 524 EKVLESPDDYGERKNKTYDSEGDWSDREGDKSRKHGHTRKSLKHQKEAMAVMDDLG---- 579
Query: 763 XXXXXXXXXXXRCDSHDSIETIDPSDRWESGTTVPCETDNSRSYSSEYNEPCEKMHRPHS 584
DS++SI D W +D + ++ +++
Sbjct: 580 -------------DSNNSIHEPDSDGGW---------SDRDGDHDGHHDHTMKRLKNRSK 617
Query: 583 QSTGVCFXXXXXXXXXXXXXXXXXXXXEERESPGEDLHSREDREHYHEKRISRRGHKKDN 404
S F R G+ HS + H +S ++
Sbjct: 618 MSE---FSNDHRNSKYRTDATDSDGDSSHRNRQGDRYHSHRRKSSRHWDEVSETADDDED 674
Query: 403 KPLNERNSESFSSGDYRGESDIGHKEDPSVRNSGGHHMQKRSSSTDLQKDQRNRKRRKSG 224
K +R ++ +GD+ E +G + RN H S D ++ ++N K G
Sbjct: 675 K--RKRTHDTDPTGDWSDE--VGERHQSKRRNCSRHW------SDDHEETEKNVKDEFQG 724
Query: 223 E 221
+
Sbjct: 725 Q 725
Score = 219 bits (557), Expect = 4e-54
Identities = 104/158 (65%), Positives = 120/158 (75%), Gaps = 9/158 (5%)
Frame = -1
Query: 2394 DGDWEYIEEGPAEIIWQGNEIIVKKNRVRVPKGSANTQASIE---------NADRPTSNP 2242
D DWEY E GPAEIIWQGNEIIVKK RVR+ K + + E + +RPTSNP
Sbjct: 107 DDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKKDVDQHSRKEVLLRLFQLYDTERPTSNP 165
Query: 2241 LPPQSEAYASYKNTSVSAEQVFESVSQQTPNFGTEQDKDHCPFHIKTGACRFGVRCSRAH 2062
LPPQSEA++ + + +S++Q+F VS+Q PNFGTEQDKDHCPFHIKTGACRFG RCSR H
Sbjct: 166 LPPQSEAFSDHNASIISSQQLFADVSEQIPNFGTEQDKDHCPFHIKTGACRFGQRCSRVH 225
Query: 2061 FYPDKSCTLLIKNMYTGPGLAWEQDEGLEVCNIAFQCC 1948
FYPDKSCTLLIKNMY GPGLAWEQDEGLE + + C
Sbjct: 226 FYPDKSCTLLIKNMYNGPGLAWEQDEGLEYTDEEVERC 263
>gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
Length = 635
Score = 278 bits (710), Expect = 8e-72
Identities = 160/351 (45%), Positives = 194/351 (55%), Gaps = 30/351 (8%)
Frame = -3
Query: 1789 QSTDEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHYKSLESAIHAYQ 1610
+ TDEEI +SYEEFYEDVHTEFLKFGE+ NFKVC+NGS HLRGNVYVHYKSL+SA+ AY
Sbjct: 174 ECTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYS 233
Query: 1609 AINGRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHCFQNPCGDYEWA 1430
++NGRYFA KQITCEFV VTRW+VAICGEYM+SR KTCSRG ACNFIHCF+NP GDYEWA
Sbjct: 234 SMNGRYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIHCFRNPGGDYEWA 293
Query: 1429 DWDNPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWSFPRDSKKIRPKHEXXXXXXXXXXX 1250
DWDNPPPRYW+ KM ALFGPSD+ K H + S + RP+
Sbjct: 294 DWDNPPPRYWIRKMAALFGPSDDSIYGKPSDTPHLERSQSSDRRRPRSSDP--------- 344
Query: 1249 XXXXXXXXXXXXXXRNRYLLSTPSNREEGSA----------ISRKMIGSTDESKRYEENS 1100
RY TPS + A S+ S E +R + S
Sbjct: 345 ----------------RY---TPSRTRDEDAHKQHSSRDYSHSKHERSSHTEHRRDRKES 385
Query: 1099 KSEDVDRYKEISIFQDHGSGDYSFKDRDKYYSRSRAH---HRNEGR-DH---------SD 959
+ D R++EI S + + Y R H H N G+ DH S+
Sbjct: 386 SASDKHRHREIKDKTSKYSSNMESERESHKYMREEKHRIDHGNGGKGDHGKVRSRKNRSE 445
Query: 958 YHENVKKKHGSSDCEGKDQLHCHDSPRNYSDLGRKQKRT-------HSSRR 827
E+++ + DQ +SP GR K+T HS+RR
Sbjct: 446 RQESLEPGSSGRSSDFIDQ-DTTESPSGSKSTGRHHKKTRRQSLEEHSTRR 495
Score = 210 bits (535), Expect = 1e-51
Identities = 101/149 (67%), Positives = 119/149 (79%), Gaps = 9/149 (6%)
Frame = -1
Query: 2394 DGDWEYIEEGPAEIIWQGNEIIVKKNRVRVPKGSANTQASIENADRPTSNPLPPQSEAYA 2215
D +WEY+E+GPAEIIW+GNEI VKK V+VPK + Q I+ DRPTSNPLPPQS A+A
Sbjct: 27 DDEWEYVEDGPAEIIWEGNEITVKKKMVKVPKKAKENQP-IQQEDRPTSNPLPPQSVAFA 85
Query: 2214 SYK-NTSVSAEQVFESVSQQTPNFGTEQ--------DKDHCPFHIKTGACRFGVRCSRAH 2062
S + S+SA++V E V+Q+TPNFGTEQ DK HCPFH+KTGACRFGVRCSR H
Sbjct: 86 SQRMEPSLSAQEVLEKVAQETPNFGTEQASSMILFQDKAHCPFHLKTGACRFGVRCSRVH 145
Query: 2061 FYPDKSCTLLIKNMYTGPGLAWEQDEGLE 1975
FYPDKSCTLL++NMY+GPGLA EQDEGLE
Sbjct: 146 FYPDKSCTLLMRNMYSGPGLALEQDEGLE 174
>sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 278 bits (710), Expect = 8e-72
Identities = 160/351 (45%), Positives = 194/351 (55%), Gaps = 30/351 (8%)
Frame = -3
Query: 1789 QSTDEEIARSYEEFYEDVHTEFLKFGEIFNFKVCKNGSFHLRGNVYVHYKSLESAIHAYQ 1610
+ TDEEI +SYEEFYEDVHTEFLKFGE+ NFKVC+NGS HLRGNVYVHYKSL+SA+ AY
Sbjct: 217 ECTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYS 276
Query: 1609 AINGRYFASKQITCEFVGVTRWRVAICGEYMKSRLKTCSRGTACNFIHCFQNPCGDYEWA 1430
++NGRYFA KQITCEFV VTRW+VAICGEYM+SR KTCSRG ACNFIHCF+NP GDYEWA
Sbjct: 277 SMNGRYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIHCFRNPGGDYEWA 336
Query: 1429 DWDNPPPRYWVEKMVALFGPSDEVGSDKHMGQEHWSFPRDSKKIRPKHEXXXXXXXXXXX 1250
DWDNPPPRYW+ KM ALFGPSD+ K H + S + RP+
Sbjct: 337 DWDNPPPRYWIRKMAALFGPSDDSIYGKPSDTPHLERSQSSDRRRPRSSDP--------- 387
Query: 1249 XXXXXXXXXXXXXXRNRYLLSTPSNREEGSA----------ISRKMIGSTDESKRYEENS 1100
RY TPS + A S+ S E +R + S
Sbjct: 388 ----------------RY---TPSRTRDEDAHKQHSSRDYSHSKHERSSHTEHRRDRKES 428
Query: 1099 KSEDVDRYKEISIFQDHGSGDYSFKDRDKYYSRSRAH---HRNEGR-DH---------SD 959
+ D R++EI S + + Y R H H N G+ DH S+
Sbjct: 429 SASDKHRHREIKDKTSKYSSNMESERESHKYMREEKHRIDHGNGGKGDHGKVRSRKNRSE 488
Query: 958 YHENVKKKHGSSDCEGKDQLHCHDSPRNYSDLGRKQKRT-------HSSRR 827
E+++ + DQ +SP GR K+T HS+RR
Sbjct: 489 RQESLEPGSSGRSSDFIDQ-DTTESPSGSKSTGRHHKKTRRQSLEEHSTRR 538
Score = 143 bits (360), Expect = 3e-31
Identities = 71/140 (50%), Positives = 82/140 (58%)
Frame = -1
Query: 2394 DGDWEYIEEGPAEIIWQGNEIIVKKNRVRVPKGSANTQASIENADRPTSNPLPPQSEAYA 2215
D +WEY+E+GPAEIIW+GNEI VKK V+VPK + Q
Sbjct: 123 DDEWEYVEDGPAEIIWEGNEITVKKKMVKVPKKAKENQP--------------------- 161
Query: 2214 SYKNTSVSAEQVFESVSQQTPNFGTEQDKDHCPFHIKTGACRFGVRCSRAHFYPDKSCTL 2035
+QDK HCPFH+KTGACRFGVRCSR HFYPDKSCTL
Sbjct: 162 ------------------------IQQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTL 197
Query: 2034 LIKNMYTGPGLAWEQDEGLE 1975
L++NMY+GPGLA EQDEGLE
Sbjct: 198 LMRNMYSGPGLALEQDEGLE 217