BLASTX nr result

ID: Coptis21_contig00009448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009448
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266315.1| PREDICTED: acyl carrier protein 1, mitochond...   181   1e-43
ref|XP_003624234.1| Acyl carrier protein [Medicago truncatula] g...   175   6e-42
ref|NP_001235044.1| uncharacterized protein LOC100306438 [Glycin...   174   1e-41
gb|ABK95371.1| unknown [Populus trichocarpa]                          174   2e-41
ref|XP_002301222.1| predicted protein [Populus trichocarpa] gi|1...   173   2e-41

>ref|XP_002266315.1| PREDICTED: acyl carrier protein 1, mitochondrial [Vitis vinifera]
           gi|297734676|emb|CBI16727.3| unnamed protein product
           [Vitis vinifera]
          Length = 124

 Score =  181 bits (459), Expect = 1e-43
 Identities = 102/126 (80%), Positives = 103/126 (81%), Gaps = 10/126 (7%)
 Frame = +1

Query: 25  MALRAAILGHIRV------VPAVTKQNVSLNRW---MSSH-DDHLDKEEVIDRVLSVVKS 174
           MALRAAIL HIRV       PA T  N    RW   MSSH DDHL KEEVI+RVLSVVKS
Sbjct: 1   MALRAAILRHIRVPVLQTLAPASTASN--WQRWIRPMSSHGDDHLQKEEVIERVLSVVKS 58

Query: 175 FPKVDPSQVTTDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCTLAIEYIS 354
           FPKVDPSQVT DVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSC LAIEYI 
Sbjct: 59  FPKVDPSQVTADVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYIY 118

Query: 355 NHPMAG 372
           NHPMAG
Sbjct: 119 NHPMAG 124


>ref|XP_003624234.1| Acyl carrier protein [Medicago truncatula]
           gi|355499249|gb|AES80452.1| Acyl carrier protein
           [Medicago truncatula]
          Length = 119

 Score =  175 bits (444), Expect = 6e-42
 Identities = 91/119 (76%), Positives = 102/119 (85%), Gaps = 4/119 (3%)
 Frame = +1

Query: 25  MALRAAILGHIRV----VPAVTKQNVSLNRWMSSHDDHLDKEEVIDRVLSVVKSFPKVDP 192
           MALRAAIL H+R+     P +   N S+ R MSSHDDH+ KEEV++RVLSV+K FPKVDP
Sbjct: 1   MALRAAILRHVRIPIQSTPKLQPWNGSI-RSMSSHDDHITKEEVVERVLSVIKDFPKVDP 59

Query: 193 SQVTTDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCTLAIEYISNHPMA 369
           S+VT +VHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSC LAIEYISNHPM+
Sbjct: 60  SKVTPEVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCHLAIEYISNHPMS 118


>ref|NP_001235044.1| uncharacterized protein LOC100306438 [Glycine max]
           gi|356531860|ref|XP_003534494.1| PREDICTED: acyl carrier
           protein 1, mitochondrial-like [Glycine max]
           gi|255628541|gb|ACU14615.1| unknown [Glycine max]
          Length = 116

 Score =  174 bits (441), Expect = 1e-41
 Identities = 92/117 (78%), Positives = 100/117 (85%), Gaps = 1/117 (0%)
 Frame = +1

Query: 25  MALRAAILGHIRVVPAVTKQNVSLNRWMSSH-DDHLDKEEVIDRVLSVVKSFPKVDPSQV 201
           MALRAA+L H+RV P      +   R MSSH DDHL KEEV++RVL+VVK FPKVDPS+V
Sbjct: 1   MALRAAVLRHVRV-PLQAAPKLQPWRAMSSHGDDHLSKEEVVERVLAVVKDFPKVDPSRV 59

Query: 202 TTDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCTLAIEYISNHPMAG 372
           + DVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSC LAIEYISNHPMAG
Sbjct: 60  SPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCHLAIEYISNHPMAG 116


>gb|ABK95371.1| unknown [Populus trichocarpa]
          Length = 122

 Score =  174 bits (440), Expect = 2e-41
 Identities = 91/123 (73%), Positives = 101/123 (82%), Gaps = 8/123 (6%)
 Frame = +1

Query: 25  MALRAAILGHIRVVPAVTKQNVSLNRW--------MSSHDDHLDKEEVIDRVLSVVKSFP 180
           MALRAA+L H+RV  AV  + +  N W        MSSHDDHL KEEV +RVLSV+KSFP
Sbjct: 1   MALRAAVLRHVRV--AVQTRELKSNPWAPSGSIRLMSSHDDHLTKEEVAERVLSVIKSFP 58

Query: 181 KVDPSQVTTDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCTLAIEYISNH 360
           KVDPS+VT +VHFQKDLGLDSLD+VEIVMALEEEFKLEIPDKEADKIDSC LAIEYI NH
Sbjct: 59  KVDPSRVTPEVHFQKDLGLDSLDSVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYIHNH 118

Query: 361 PMA 369
           P+A
Sbjct: 119 PLA 121


>ref|XP_002301222.1| predicted protein [Populus trichocarpa] gi|118481753|gb|ABK92816.1|
           unknown [Populus trichocarpa]
           gi|222842948|gb|EEE80495.1| predicted protein [Populus
           trichocarpa]
          Length = 122

 Score =  173 bits (439), Expect = 2e-41
 Identities = 91/121 (75%), Positives = 99/121 (81%), Gaps = 6/121 (4%)
 Frame = +1

Query: 25  MALRAAILGHIRVVPAVTKQNVS------LNRWMSSHDDHLDKEEVIDRVLSVVKSFPKV 186
           MALRAA+L HIRV     +   +        R MSSHDDHL KEEV+DRV+SVVKSFPKV
Sbjct: 1   MALRAAVLRHIRVPVQTLRLKTNPCAPSGSVRLMSSHDDHLTKEEVVDRVVSVVKSFPKV 60

Query: 187 DPSQVTTDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCTLAIEYISNHPM 366
           DPS+VT +VHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSC LAIEYI NHP+
Sbjct: 61  DPSRVTPEVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYIHNHPL 120

Query: 367 A 369
           A
Sbjct: 121 A 121


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