BLASTX nr result

ID: Coptis21_contig00009443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009443
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENC...   121   7e-26
emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]   121   7e-26
ref|XP_002325710.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002518012.1| conserved hypothetical protein [Ricinus comm...   108   4e-22
ref|XP_003602715.1| Protein SUPPRESSOR OF GENE SILENCING-like pr...    96   3e-18

>ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3-like [Vitis
           vinifera]
          Length = 718

 Score =  121 bits (303), Expect = 7e-26
 Identities = 66/144 (45%), Positives = 83/144 (57%), Gaps = 14/144 (9%)
 Frame = +1

Query: 121 SGATNTSCK-----------VDQLSHDMADISLGSNDDGNWEKFSKKSKNRGGSFV-KQW 264
           +GA+N S K           V+ L+  +ADISL S  DG WE +S+KSKNR GS   K W
Sbjct: 84  AGASNASPKSRHASEVPNVGVEPLNQGVADISLDSAQDGEWEVYSRKSKNRAGSSAAKSW 143

Query: 265 GSQCSNPNAWGHPNVVQKLGMKGNSGTGKAPPGAQPSTIADYNRNYGRGNVMPHPYNRSL 444
             Q S+  AWG P+  QKLGM+ N G+GKAP  +  +  AD  +  GRGNV P   NR L
Sbjct: 144 APQNSSTKAWGQPDTAQKLGMRSNDGSGKAPANSWAAQTADSRKPAGRGNVRPQSINRGL 203

Query: 445 EN--MAPPGVMQPPLQHGWQQGAR 510
           E   M P  V+ PPL+HGW+   R
Sbjct: 204 EGSYMGPQPVIPPPLEHGWKWNNR 227


>emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score =  121 bits (303), Expect = 7e-26
 Identities = 66/144 (45%), Positives = 83/144 (57%), Gaps = 14/144 (9%)
 Frame = +1

Query: 121 SGATNTSCK-----------VDQLSHDMADISLGSNDDGNWEKFSKKSKNRGGSFV-KQW 264
           +GA+N S K           V+ L+  +ADISL S  DG WE +S+KSKNR GS   K W
Sbjct: 321 AGASNASPKSRHASEVPNVGVEPLNQGVADISLDSAQDGEWEVYSRKSKNRAGSSAAKSW 380

Query: 265 GSQCSNPNAWGHPNVVQKLGMKGNSGTGKAPPGAQPSTIADYNRNYGRGNVMPHPYNRSL 444
             Q S+  AWG P+  QKLGM+ N G+GKAP  +  +  AD  +  GRGNV P   NR L
Sbjct: 381 APQNSSTKAWGQPDTAQKLGMRSNDGSGKAPANSWAAQTADSRKPAGRGNVRPQSINRGL 440

Query: 445 EN--MAPPGVMQPPLQHGWQQGAR 510
           E   M P  V+ PPL+HGW+   R
Sbjct: 441 EGSYMGPQPVIPPPLEHGWKWNNR 464


>ref|XP_002325710.1| predicted protein [Populus trichocarpa] gi|222862585|gb|EEF00092.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  120 bits (302), Expect = 1e-25
 Identities = 65/139 (46%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
 Frame = +1

Query: 109 SSGDSGATNTSCKVDQLSHDMADISLGS-NDDGNWEKFSKKSKNRGGSFV-KQWGSQCSN 282
           S G + A  +   V+QLS  +ADI L S  DDG WE  +KKSKNR GS   K WGSQ +N
Sbjct: 20  SKGKNVAEASGPAVEQLSQGVADIGLDSVQDDGEWEVIAKKSKNRAGSSAAKPWGSQTTN 79

Query: 283 PNAWGHPNVVQKLGMKGNSGTGKAPPGAQPSTIADYNRNYGRGNVMPHPYNRSLEN--MA 456
             AWG+P+V+QKLGM+ N G+G+ P  A  +   D     GRG   P  +NR +++   A
Sbjct: 80  NKAWGNPDVIQKLGMRNNGGSGRNPGNAWSTQPVDPRGPTGRGAARPQTFNRGMQSNYAA 139

Query: 457 PPGVMQPPLQHGWQQGARA 513
           P  V++PPL+HGW   ARA
Sbjct: 140 PQPVIRPPLEHGWSWQARA 158


>ref|XP_002518012.1| conserved hypothetical protein [Ricinus communis]
           gi|223542994|gb|EEF44530.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 634

 Score =  108 bits (271), Expect = 4e-22
 Identities = 59/138 (42%), Positives = 81/138 (58%), Gaps = 4/138 (2%)
 Frame = +1

Query: 109 SSGDSGATNTSCKVDQLSHDMADISL-GSNDDGNWEKFSKKSKNRGGSFV-KQWGSQCSN 282
           S G + +  +S K++QLS  +ADI+L  + DDG WE  ++K+KNR GS   K WGSQ SN
Sbjct: 20  SKGKNSSHVSSPKLEQLSQSVADINLDATEDDGQWEVIARKTKNRAGSSAAKPWGSQNSN 79

Query: 283 PNAWGHPNVVQKLGMKGNSGTGKAPPGAQPSTIADYNRNYGRGNVMPHPYNRSLEN--MA 456
             AW H + VQKLGM+ N G+G+     +P+         GRGN  P   N  +EN  +A
Sbjct: 80  TKAWEHQDTVQKLGMRSNGGSGRMSGNTRPTQAT------GRGNTRPQSSNWGMENNYVA 133

Query: 457 PPGVMQPPLQHGWQQGAR 510
           P   + PPL+HGW   +R
Sbjct: 134 PQPTIPPPLEHGWNWQSR 151


>ref|XP_003602715.1| Protein SUPPRESSOR OF GENE SILENCING-like protein [Medicago
           truncatula] gi|355491763|gb|AES72966.1| Protein
           SUPPRESSOR OF GENE SILENCING-like protein [Medicago
           truncatula]
          Length = 644

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 58/134 (43%), Positives = 73/134 (54%), Gaps = 6/134 (4%)
 Frame = +1

Query: 112 SGDSGATNTSCKVDQLSHDMADISLGSN-DDGNWEKFSKKSKNRGGSF--VKQWGSQC-- 276
           S   G +    K +QL+  +AD++LGS  DDG WE +SKKSKNRGG     KQ G     
Sbjct: 20  SKGKGVSQFDPKTEQLAQGIADVNLGSGQDDGPWETYSKKSKNRGGGSGAAKQRGPPAHG 79

Query: 277 SNPNAWGHPNVVQKLGMKGNSGTGKAPPGAQPSTIADYNRNYGRGNVMPHPYNRSL-ENM 453
           SNP AWG+ +V QK G+  NSG G+A      +  A Y R  GRGN  P P       N+
Sbjct: 80  SNPRAWGNADVAQKQGVWNNSGAGRAAGNPWQTPNAGYMRPAGRGNGRPQPATGGYGYNV 139

Query: 454 APPGVMQPPLQHGW 495
               ++ PPLQ GW
Sbjct: 140 TSNPIIPPPLQGGW 153


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