BLASTX nr result
ID: Coptis21_contig00009439
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009439
(1924 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 798 0.0
ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 746 0.0
ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 746 0.0
emb|CBI29363.3| unnamed protein product [Vitis vinifera] 738 0.0
ref|XP_002307523.1| predicted protein [Populus trichocarpa] gi|2... 731 0.0
>ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Vitis vinifera]
Length = 635
Score = 798 bits (2061), Expect = 0.0
Identities = 424/593 (71%), Positives = 484/593 (81%), Gaps = 4/593 (0%)
Frame = +3
Query: 45 LEPMRHSILLEKLRARHLKDSSKIPLNKAPCVGSVEKQVGDDKLSKSRKVGNTKVFTSFR 224
L+PMRHSILLEKLR RHLKDS+K P ++P + + K+ G+ KS+K K+ +SF
Sbjct: 66 LQPMRHSILLEKLRFRHLKDSAKSPQTRSPPLSTGGKE-GEPGSMKSQK--KPKMVSSFE 122
Query: 225 ELGLDEEVMGAVDELGISVPTEIQGVGIPVVLEGKSVVLGSHTGSGKTLAYMLPLVQLLR 404
ELGL EEVM AV E GISVPTEIQ +G+P VLEG+SVVLGSHTGSGKTLAYMLPLVQLLR
Sbjct: 123 ELGLSEEVMAAVRETGISVPTEIQCIGVPAVLEGRSVVLGSHTGSGKTLAYMLPLVQLLR 182
Query: 405 QDEVLHGMLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQEDS 584
+DE L G+LMKPRRPRAVVLCPTRELSEQVFRV+KSISHHARFRSTMVSGGGRLRPQEDS
Sbjct: 183 RDEALSGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDS 242
Query: 585 LNVPIDMVVGTPGRVLQHIEEGNIVYGDIKYVVLDEADTMFDRGFGPDIRKFLGPLKNRA 764
LN+PIDMVVGTPGRVLQHIEEGN+VYG+IKY+VLDEADTMFDRGFGPDIRKFL PLKNRA
Sbjct: 243 LNIPIDMVVGTPGRVLQHIEEGNMVYGEIKYLVLDEADTMFDRGFGPDIRKFLAPLKNRA 302
Query: 765 LKSDDQGFQTILVTATMTKAVQMLVDEEFEGILHLRTSTLHKKIASARHDFIKLSGAENK 944
KSDDQGFQT+LVTATMTKAVQ L+DEEF+GI+HLRTSTLHKKIASARHDFIKLSG+ENK
Sbjct: 303 SKSDDQGFQTVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENK 362
Query: 945 LEALLQVLEPSLSKGNRVMVFCNTLNSSRAVDHYLGENQISTVNYHGEVPAEQRVENLKK 1124
LEALLQVLEPSL+KGN+VMVFCNTLNSSRAVDH+LGENQI TVNYHGEVPAEQRVENLKK
Sbjct: 363 LEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRVENLKK 422
Query: 1125 FKSQDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLV 1304
FK++DGDCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVTSLV
Sbjct: 423 FKTEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLV 482
Query: 1305 AKKDTSLAARIEEAIRKNESLESLTVDNFRMASDKARVS-LKGKSST-VRASNQKSKSEL 1478
AKKD LA RIEEAIRKNESLE+LT DN R +A++S K K++ V+ S QK+K+
Sbjct: 483 AKKDLLLATRIEEAIRKNESLEALTADNLRRDVARAKISEQKAKNANLVKVSKQKNKT-- 540
Query: 1479 AKPSRGRGKVVAVDXXXXXXVEPNAGKRSAPTRTGRFTPPTKTGRSALPTKTGRPATKVS 1658
KV ++ +G+++ ++G+ +PPTK+ + K+
Sbjct: 541 --------KVESMKSSSKAASTQTSGRKTLGGKSGKVSPPTKS----------KKTVKIL 582
Query: 1659 KLSKPFSASVSKKATLGG--KKPAERRKSNVAKPVSKLNVVGFRGRTSSLVKS 1811
K SK SA K L G K+ +R S+V SKL+VVGFRGR+SS +K+
Sbjct: 583 KPSKSSSAGGGSKRALSGVMKRADSKRSSSVKSSTSKLSVVGFRGRSSSSIKN 635
>ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
sativus]
Length = 634
Score = 746 bits (1925), Expect = 0.0
Identities = 406/589 (68%), Positives = 463/589 (78%), Gaps = 5/589 (0%)
Frame = +3
Query: 45 LEPMRHSILLEKLRARHLKDSSKIPLNKAPCVGSVEKQVG--DDKLSKSRKVGNTKVFTS 218
+EP++HS LLE+LR RHLK+S+ P K P ++ + VG +D++ KS K K+ S
Sbjct: 66 IEPLKHSQLLERLRTRHLKESA--PKTK-PTRNTLSQSVGSAEDEMKKSEKK-KKKLDES 121
Query: 219 FRELGLDEEVMGAVDELGISVPTEIQGVGIPVVLEGKSVVLGSHTGSGKTLAYMLPLVQL 398
F ELGL+EEVMGAV E+GI VP+EIQ +GIP VLEGKSV+LGSHTGSGKTLAY+LPLVQL
Sbjct: 122 FEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQL 181
Query: 399 LRQDEVLHGMLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQE 578
LR+DE L G LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQE
Sbjct: 182 LRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQE 241
Query: 579 DSLNVPIDMVVGTPGRVLQHIEEGNIVYGDIKYVVLDEADTMFDRGFGPDIRKFLGPLKN 758
DSL+ PIDMVVGTPGRVLQHIE GN+VYGDIKY+VLDEADTMFD GFGPDIRKF+GPLK+
Sbjct: 242 DSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKH 301
Query: 759 RALKSDDQGFQTILVTATMTKAVQMLVDEEFEGILHLRTSTLHKKIASARHDFIKLSGAE 938
RA DDQGFQTILVTATMTKAVQ L+DEEF+GI+HLRTSTLHKKIASARHDFIKLSG+E
Sbjct: 302 RASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSE 361
Query: 939 NKLEALLQVLEPSLSKGNRVMVFCNTLNSSRAVDHYLGENQISTVNYHGEVPAEQRVENL 1118
NKLEALLQVLEPSL+KGNRVMVFCNTLNSSRAVDH+LGENQISTVNYHGEVPA++RVENL
Sbjct: 362 NKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENL 421
Query: 1119 KKFKSQDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTS 1298
KKFKS D DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTS
Sbjct: 422 KKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTS 481
Query: 1299 LVAKKDTSLAARIEEAIRKNESLESLTVDNFRMASDKARVSLKGKSSTVRASNQKSKSEL 1478
LV KKD LA RIEEAIRKNESLESLT D+ + R++ ++ ++L
Sbjct: 482 LVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRIT----------EHKTKNAKL 531
Query: 1479 AKPSRGRGKVVAVDXXXXXXVEPNAGKRSAPTRTGRFTPPTKTGRSALPTKTGRPATKVS 1658
K S GR + +A K S+ G + G+++ +T +P VS
Sbjct: 532 IKASTGRSGAKSA---------TSAPKSSSVHSKG------EPGKASYSERTRKPGVSVS 576
Query: 1659 KLSKPFSASVSKKATLGGKKPAERRK---SNVAKPVSKLNVVGFRGRTS 1796
K K S ++ +K + KK RK S + KLNVVGFRGR++
Sbjct: 577 KPVKS-SRNIPRKPSSETKKQVASRKRPGSAIKSSGQKLNVVGFRGRSN 624
>ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
sativus]
Length = 634
Score = 746 bits (1925), Expect = 0.0
Identities = 406/589 (68%), Positives = 463/589 (78%), Gaps = 5/589 (0%)
Frame = +3
Query: 45 LEPMRHSILLEKLRARHLKDSSKIPLNKAPCVGSVEKQVG--DDKLSKSRKVGNTKVFTS 218
+EP++HS LLE+LR RHLK+S+ P K P ++ + VG +D++ KS K K+ S
Sbjct: 66 IEPLKHSQLLERLRTRHLKESA--PKTK-PTRNTLSQSVGSAEDEMKKSEKK-KKKLDES 121
Query: 219 FRELGLDEEVMGAVDELGISVPTEIQGVGIPVVLEGKSVVLGSHTGSGKTLAYMLPLVQL 398
F ELGL+EEVMGAV E+GI VP+EIQ +GIP VLEGKSV+LGSHTGSGKTLAY+LPLVQL
Sbjct: 122 FEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQL 181
Query: 399 LRQDEVLHGMLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQE 578
LR+DE L G LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQE
Sbjct: 182 LRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQE 241
Query: 579 DSLNVPIDMVVGTPGRVLQHIEEGNIVYGDIKYVVLDEADTMFDRGFGPDIRKFLGPLKN 758
DSL+ PIDMVVGTPGRVLQHIE GN+VYGDIKY+VLDEADTMFD GFGPDIRKF+GPLK+
Sbjct: 242 DSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKH 301
Query: 759 RALKSDDQGFQTILVTATMTKAVQMLVDEEFEGILHLRTSTLHKKIASARHDFIKLSGAE 938
RA DDQGFQTILVTATMTKAVQ L+DEEF+GI+HLRTSTLHKKIASARHDFIKLSG+E
Sbjct: 302 RASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSE 361
Query: 939 NKLEALLQVLEPSLSKGNRVMVFCNTLNSSRAVDHYLGENQISTVNYHGEVPAEQRVENL 1118
NKLEALLQVLEPSL+KGNRVMVFCNTLNSSRAVDH+LGENQISTVNYHGEVPA++RVENL
Sbjct: 362 NKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENL 421
Query: 1119 KKFKSQDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTS 1298
KKFKS D DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTS
Sbjct: 422 KKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTS 481
Query: 1299 LVAKKDTSLAARIEEAIRKNESLESLTVDNFRMASDKARVSLKGKSSTVRASNQKSKSEL 1478
LV KKD LA RIEEAIRKNESLESLT D+ + R++ ++ ++L
Sbjct: 482 LVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRIT----------EHKTKNAKL 531
Query: 1479 AKPSRGRGKVVAVDXXXXXXVEPNAGKRSAPTRTGRFTPPTKTGRSALPTKTGRPATKVS 1658
K S GR + +A K S+ G + G+++ +T +P VS
Sbjct: 532 IKASTGRSGAKSA---------TSAPKSSSVHSKG------EPGKASYSERTRKPGVSVS 576
Query: 1659 KLSKPFSASVSKKATLGGKKPAERRK---SNVAKPVSKLNVVGFRGRTS 1796
K K S ++ +K + KK RK S + KLNVVGFRGR++
Sbjct: 577 KPVKS-SRNIPRKPSSETKKQVASRKRPGSAIKSSGQKLNVVGFRGRSN 624
>emb|CBI29363.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 738 bits (1905), Expect = 0.0
Identities = 387/525 (73%), Positives = 436/525 (83%), Gaps = 4/525 (0%)
Frame = +3
Query: 249 MGAVDELGISVPTEIQGVGIPVVLEGKSVVLGSHTGSGKTLAYMLPLVQLLRQDEVLHGM 428
M AV E GISVPTEIQ +G+P VLEG+SVVLGSHTGSGKTLAYMLPLVQLLR+DE L G+
Sbjct: 1 MAAVRETGISVPTEIQCIGVPAVLEGRSVVLGSHTGSGKTLAYMLPLVQLLRRDEALSGV 60
Query: 429 LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQEDSLNVPIDMV 608
LMKPRRPRAVVLCPTRELSEQVFRV+KSISHHARFRSTMVSGGGRLRPQEDSLN+PIDMV
Sbjct: 61 LMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNIPIDMV 120
Query: 609 VGTPGRVLQHIEEGNIVYGDIKYVVLDEADTMFDRGFGPDIRKFLGPLKNRALKSDDQGF 788
VGTPGRVLQHIEEGN+VYG+IKY+VLDEADTMFDRGFGPDIRKFL PLKNRA KSDDQGF
Sbjct: 121 VGTPGRVLQHIEEGNMVYGEIKYLVLDEADTMFDRGFGPDIRKFLAPLKNRASKSDDQGF 180
Query: 789 QTILVTATMTKAVQMLVDEEFEGILHLRTSTLHKKIASARHDFIKLSGAENKLEALLQVL 968
QT+LVTATMTKAVQ L+DEEF+GI+HLRTSTLHKKIASARHDFIKLSG+ENKLEALLQVL
Sbjct: 181 QTVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVL 240
Query: 969 EPSLSKGNRVMVFCNTLNSSRAVDHYLGENQISTVNYHGEVPAEQRVENLKKFKSQDGDC 1148
EPSL+KGN+VMVFCNTLNSSRAVDH+LGENQI TVNYHGEVPAEQRVENLKKFK++DGDC
Sbjct: 241 EPSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRVENLKKFKTEDGDC 300
Query: 1149 PTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVAKKDTSLA 1328
PTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVTSLVAKKD LA
Sbjct: 301 PTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLLLA 360
Query: 1329 ARIEEAIRKNESLESLTVDNFRMASDKARVS-LKGKSST-VRASNQKSKSELAKPSRGRG 1502
RIEEAIRKNESLE+LT DN R +A++S K K++ V+ S QK+K+
Sbjct: 361 TRIEEAIRKNESLEALTADNLRRDVARAKISEQKAKNANLVKVSKQKNKT---------- 410
Query: 1503 KVVAVDXXXXXXVEPNAGKRSAPTRTGRFTPPTKTGRSALPTKTGRPATKVSKLSKPFSA 1682
KV ++ +G+++ ++G+ +PPTK+ + K+ K SK SA
Sbjct: 411 KVESMKSSSKAASTQTSGRKTLGGKSGKVSPPTKS----------KKTVKILKPSKSSSA 460
Query: 1683 SVSKKATLGG--KKPAERRKSNVAKPVSKLNVVGFRGRTSSLVKS 1811
K L G K+ +R S+V SKL+VVGFRGR+SS +K+
Sbjct: 461 GGGSKRALSGVMKRADSKRSSSVKSSTSKLSVVGFRGRSSSSIKN 505
>ref|XP_002307523.1| predicted protein [Populus trichocarpa] gi|222856972|gb|EEE94519.1|
predicted protein [Populus trichocarpa]
Length = 573
Score = 731 bits (1888), Expect = 0.0
Identities = 380/484 (78%), Positives = 418/484 (86%), Gaps = 8/484 (1%)
Frame = +3
Query: 48 EPMRHSILLEKLRARHLKDSSKIPLNKAPC------VGSVEKQVGDDKLSKSRKVGNTKV 209
+ ++HSILLE+LR RHLK S K L V +E + +D KS+K K+
Sbjct: 57 DEVKHSILLERLRLRHLKGSKKPQLTDTQTQTALKPVVLIEGEEEEDGFKKSKK--GKKI 114
Query: 210 FTSFRELGLDEEVMGAVDELGISVPTEIQGVGIPVVLEGKSVVLGSHTGSGKTLAYMLPL 389
SF ELGL EEVMGAV E+GI VPTEIQ +GIP +L+ ++VVLGSHTGSGKTLAYMLPL
Sbjct: 115 AGSFEELGLSEEVMGAVKEMGIEVPTEIQCIGIPAILDSRTVVLGSHTGSGKTLAYMLPL 174
Query: 390 VQLLRQDEVLHGMLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLR 569
VQLLR+DE L G LMKPRRPRAVVLCPTRELSEQVFRV+KSI HHARFRSTMVSGGGR+R
Sbjct: 175 VQLLRRDEALLGRLMKPRRPRAVVLCPTRELSEQVFRVAKSIGHHARFRSTMVSGGGRMR 234
Query: 570 PQEDSLNVPIDMVVGTPGRVLQHIEEGNIVYGDIKYVVLDEADTMFDRGFGPDIRKFLGP 749
PQEDSLN PIDMVVGTPGRVLQHI++GN+VYGDIKY+VLDEADTMFDRGFGPDI KFLGP
Sbjct: 235 PQEDSLNNPIDMVVGTPGRVLQHIQDGNMVYGDIKYLVLDEADTMFDRGFGPDIHKFLGP 294
Query: 750 LKNRALKSDDQGFQTILVTATMTKAVQMLVDEEFEGILHLRTSTLHKKIASARHDFIKLS 929
LKNR KSD QGFQTILVTATMTKAVQ L+DEEF+GI HLRTSTLHKKIASARHDFIKLS
Sbjct: 295 LKNRTSKSDGQGFQTILVTATMTKAVQKLIDEEFQGIEHLRTSTLHKKIASARHDFIKLS 354
Query: 930 GAENKLEALLQVLEPSLSKGNRVMVFCNTLNSSRAVDHYLGENQISTVNYHGEVPAEQRV 1109
G+ENKLEALLQVLEPSL+KGNRVMVFCNTLNSSRA DH+L ENQISTVNYHGEVPAEQRV
Sbjct: 355 GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAADHFLAENQISTVNYHGEVPAEQRV 414
Query: 1110 ENLKKFKSQDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK 1289
ENL KFKS DGDCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGK
Sbjct: 415 ENLNKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGK 474
Query: 1290 VTSLVAKKDTSLAARIEEAIRKNESLESLTVDNFRMASDKARVS-LKGKSS-TVRASNQK 1463
VTSLVA+KD LAARIEEA+RKNESLESLTVDN R +AR++ +GKS+ ++ASNQK
Sbjct: 475 VTSLVARKDQQLAARIEEAMRKNESLESLTVDNVRRDIARARITEQQGKSAKLIKASNQK 534
Query: 1464 SKSE 1475
S ++
Sbjct: 535 SNNK 538