BLASTX nr result

ID: Coptis21_contig00009436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009436
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20214.3| unnamed protein product [Vitis vinifera]               82   3e-14
ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [...    82   3e-14
ref|XP_003543220.1| PREDICTED: tRNA dimethylallyltransferase 9-l...    75   5e-12
ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichoc...    74   2e-11
ref|XP_004137218.1| PREDICTED: tRNA dimethylallyltransferase 9-l...    72   4e-11

>emb|CBI20214.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/63 (65%), Positives = 47/63 (74%)
 Frame = +2

Query: 14  GSQKFQKCLQRLLLKVHS*LIDLQRNGDWDAAVALVVKAGDSKAHHAALNDWYRLKRSLE 193
           G     K  + +  +V+S L+DLQRNGDWDAAV LVVKAGDSKA   A NDWYRL+RSLE
Sbjct: 141 GKPDVPKASREIASEVYSELMDLQRNGDWDAAVQLVVKAGDSKAQSLAANDWYRLRRSLE 200

Query: 194 IIK 202
           IIK
Sbjct: 201 IIK 203


>ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [Vitis vinifera]
          Length = 447

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/63 (65%), Positives = 47/63 (74%)
 Frame = +2

Query: 14  GSQKFQKCLQRLLLKVHS*LIDLQRNGDWDAAVALVVKAGDSKAHHAALNDWYRLKRSLE 193
           G     K  + +  +V+S L+DLQRNGDWDAAV LVVKAGDSKA   A NDWYRL+RSLE
Sbjct: 156 GKPDVPKASREIASEVYSELMDLQRNGDWDAAVQLVVKAGDSKAQSLAANDWYRLRRSLE 215

Query: 194 IIK 202
           IIK
Sbjct: 216 IIK 218


>ref|XP_003543220.1| PREDICTED: tRNA dimethylallyltransferase 9-like [Glycine max]
          Length = 448

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
 Frame = +2

Query: 14  GSQKFQKCLQRLLLKVHS*LIDLQRNGDWDAAVALVVKAGDSKAHHAALNDWYRLKRSLE 193
           G     K    ++ + +  L +LQRN DWD AV LVVKAGD KA   A+NDWYRL+RSLE
Sbjct: 153 GKPDVPKASPEIVSEAYQELAELQRNDDWDTAVQLVVKAGDPKAQFLAVNDWYRLRRSLE 212

Query: 194 IIKE--VCVSVFMFSSGEHLWPRSYGLTNGPSLTDLH 298
           IIK      S F            YG+ +G  L+D++
Sbjct: 213 IIKSSGSPPSAFRVPYDSFREQGEYGVADGSELSDMN 249


>ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichocarpa]
           gi|222847679|gb|EEE85226.1| tRNA isopentenyltransferase
           [Populus trichocarpa]
          Length = 443

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/63 (58%), Positives = 44/63 (69%)
 Frame = +2

Query: 14  GSQKFQKCLQRLLLKVHS*LIDLQRNGDWDAAVALVVKAGDSKAHHAALNDWYRLKRSLE 193
           G     K    +  +V+S L +L+RN DWDAAV LVVKAGDS+A   A NDWYRL+RSLE
Sbjct: 153 GKPDVPKASPEIASEVYSELAELERNKDWDAAVQLVVKAGDSQAQFLAANDWYRLRRSLE 212

Query: 194 IIK 202
           IIK
Sbjct: 213 IIK 215


>ref|XP_004137218.1| PREDICTED: tRNA dimethylallyltransferase 9-like [Cucumis sativus]
           gi|449483192|ref|XP_004156518.1| PREDICTED: tRNA
           dimethylallyltransferase 9-like [Cucumis sativus]
          Length = 482

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/63 (58%), Positives = 43/63 (68%)
 Frame = +2

Query: 14  GSQKFQKCLQRLLLKVHS*LIDLQRNGDWDAAVALVVKAGDSKAHHAALNDWYRLKRSLE 193
           G     K    +  +V S L DL+RN DWDAAV LVVKAGDS+A   A+NDWYRL+RS E
Sbjct: 177 GKPNVPKASPDIAAEVCSELADLRRNEDWDAAVQLVVKAGDSRAQDLAINDWYRLRRSYE 236

Query: 194 IIK 202
           IIK
Sbjct: 237 IIK 239


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