BLASTX nr result

ID: Coptis21_contig00009412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009412
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302852.1| predicted protein [Populus trichocarpa] gi|2...   137   2e-30
ref|XP_002528950.1| 3-oxoacyl-[acyl-carrier-protein] synthase, p...   133   3e-29
pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas gi|56...   129   3e-28
ref|NP_178533.2| 3-oxoacyl-[acyl-carrier-protein] synthase [Arab...   129   3e-28
ref|XP_002277197.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   129   3e-28

>ref|XP_002302852.1| predicted protein [Populus trichocarpa] gi|222844578|gb|EEE82125.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  137 bits (344), Expect = 2e-30
 Identities = 70/97 (72%), Positives = 78/97 (80%)
 Frame = -3

Query: 595 AIKTVFLEHATSGALALSSTKXXXXXXXXXXXAVEAIFTVLALYHGIAPLTLNLSSPDPI 416
           AIKTVF EHATSGALA SSTK           AVEAIF +LA++HGIAPLTLNL+ PDP+
Sbjct: 318 AIKTVFSEHATSGALAFSSTKGAIGHLLGAAGAVEAIFAILAVHHGIAPLTLNLNKPDPL 377

Query: 415 FRDNFMPLTTSREMNIRAALSNSFGFGGTNASLLFAS 305
           F+DNFMPL  S+EM +RAALSNSFGFGGTNASLLF S
Sbjct: 378 FKDNFMPLIASKEMPVRAALSNSFGFGGTNASLLFTS 414


>ref|XP_002528950.1| 3-oxoacyl-[acyl-carrier-protein] synthase, putative [Ricinus
           communis] gi|223531596|gb|EEF33424.1|
           3-oxoacyl-[acyl-carrier-protein] synthase, putative
           [Ricinus communis]
          Length = 472

 Score =  133 bits (334), Expect = 3e-29
 Identities = 68/94 (72%), Positives = 78/94 (82%)
 Frame = -3

Query: 595 AIKTVFLEHATSGALALSSTKXXXXXXXXXXXAVEAIFTVLALYHGIAPLTLNLSSPDPI 416
           AIKT+F EHAT+GALALSSTK           AVEAIF+VLA++HGIAPLTLNL+ PDPI
Sbjct: 374 AIKTIFFEHATTGALALSSTKGAIGHLLGAAGAVEAIFSVLAIHHGIAPLTLNLNKPDPI 433

Query: 415 FRDNFMPLTTSREMNIRAALSNSFGFGGTNASLL 314
           F+D FMPLT S++M I+AALSNSFGFGGTNASLL
Sbjct: 434 FKDEFMPLTASKKMPIQAALSNSFGFGGTNASLL 467


>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas
           gi|56966611|pdb|1W0I|B Chain B, Arabidopsis Thaliana
           Mitochondrial Kas gi|126030848|pdb|2IX4|A Chain A,
           Arabidopsis Thaliana Mitochondrial Beta-Ketoacyl Acp
           Synthase Hexanoic Acid Complex gi|126030849|pdb|2IX4|B
           Chain B, Arabidopsis Thaliana Mitochondrial
           Beta-Ketoacyl Acp Synthase Hexanoic Acid Complex
          Length = 431

 Score =  129 bits (325), Expect = 3e-28
 Identities = 65/97 (67%), Positives = 77/97 (79%)
 Frame = -3

Query: 595 AIKTVFLEHATSGALALSSTKXXXXXXXXXXXAVEAIFTVLALYHGIAPLTLNLSSPDPI 416
           AIKTVF EHATSG LA SSTK           AVEAIF++LA++HG+AP+TLN+ +PDPI
Sbjct: 334 AIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPI 393

Query: 415 FRDNFMPLTTSREMNIRAALSNSFGFGGTNASLLFAS 305
           F   FMPLTTS++M +R A+SNSFGFGGTNASLLFAS
Sbjct: 394 FDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430


>ref|NP_178533.2| 3-oxoacyl-[acyl-carrier-protein] synthase [Arabidopsis thaliana]
           gi|62286891|sp|Q8L3X9.1|KASM_ARATH RecName:
           Full=3-oxoacyl-[acyl-carrier-protein] synthase,
           mitochondrial; AltName: Full=Beta-ketoacyl-ACP synthase;
           AltName: Full=mtKAS; Flags: Precursor
           gi|20373025|dbj|BAB91181.1| 3-ketoacyl-acyl carrier
           protein synthase [Arabidopsis thaliana]
           gi|20466243|gb|AAM20439.1| 3-oxoacyl carrier protein
           synthase [Arabidopsis thaliana]
           gi|22136308|gb|AAM91232.1| 3-oxoacyl carrier protein
           synthase [Arabidopsis thaliana]
           gi|330250750|gb|AEC05844.1|
           3-oxoacyl-[acyl-carrier-protein] synthase [Arabidopsis
           thaliana]
          Length = 461

 Score =  129 bits (325), Expect = 3e-28
 Identities = 65/97 (67%), Positives = 77/97 (79%)
 Frame = -3

Query: 595 AIKTVFLEHATSGALALSSTKXXXXXXXXXXXAVEAIFTVLALYHGIAPLTLNLSSPDPI 416
           AIKTVF EHATSG LA SSTK           AVEAIF++LA++HG+AP+TLN+ +PDPI
Sbjct: 364 AIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPI 423

Query: 415 FRDNFMPLTTSREMNIRAALSNSFGFGGTNASLLFAS 305
           F   FMPLTTS++M +R A+SNSFGFGGTNASLLFAS
Sbjct: 424 FDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 460


>ref|XP_002277197.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
           [Vitis vinifera] gi|297739239|emb|CBI28890.3| unnamed
           protein product [Vitis vinifera]
          Length = 463

 Score =  129 bits (325), Expect = 3e-28
 Identities = 67/98 (68%), Positives = 77/98 (78%)
 Frame = -3

Query: 595 AIKTVFLEHATSGALALSSTKXXXXXXXXXXXAVEAIFTVLALYHGIAPLTLNLSSPDPI 416
           AIK++F + ATSG+LALSSTK           AVEAIF VLA++HGIAPLTLNL+ PDP+
Sbjct: 365 AIKSIFSDQATSGSLALSSTKGAIGHLLGAAGAVEAIFAVLAIHHGIAPLTLNLTRPDPV 424

Query: 415 FRDNFMPLTTSREMNIRAALSNSFGFGGTNASLLFASA 302
           F   +MPLT SREM +RAALSNSFGFGGTNASLLF SA
Sbjct: 425 FSGGYMPLTASREMPVRAALSNSFGFGGTNASLLFTSA 462


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