BLASTX nr result

ID: Coptis21_contig00009400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009400
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143865.1| PREDICTED: putative E3 ubiquitin-protein lig...    51   8e-11
ref|XP_002509962.1| protein binding protein, putative [Ricinus c...    50   1e-10
ref|NP_001242007.1| uncharacterized protein LOC100817441 [Glycin...    50   2e-10
ref|XP_003538132.1| PREDICTED: putative E3 ubiquitin-protein lig...    50   2e-10
gb|ACU17129.1| unknown [Glycine max]                                   50   2e-10

>ref|XP_004143865.1| PREDICTED: putative E3 ubiquitin-protein ligase UBR7-like [Cucumis
           sativus] gi|449501781|ref|XP_004161456.1| PREDICTED:
           putative E3 ubiquitin-protein ligase UBR7-like [Cucumis
           sativus]
          Length = 413

 Score = 51.2 bits (121), Expect(2) = 8e-11
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -3

Query: 390 EVDLVLGRYEGKECTYDNCWLKRQAIFSCLFC 295
           E DLVLG  EGKECTY+  ++KRQAIFSCL C
Sbjct: 28  EADLVLGGDEGKECTYNKGYMKRQAIFSCLTC 59



 Score = 42.0 bits (97), Expect(2) = 8e-11
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -2

Query: 289 PDGNDGICTVCSFSCHGGHKV 227
           PDGN G+CT CS SCH GH++
Sbjct: 61  PDGNAGVCTACSLSCHDGHEI 81


>ref|XP_002509962.1| protein binding protein, putative [Ricinus communis]
           gi|223549861|gb|EEF51349.1| protein binding protein,
           putative [Ricinus communis]
          Length = 420

 Score = 50.4 bits (119), Expect(2) = 1e-10
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = -3

Query: 390 EVDLVLGRYEGKECTYDNCWLKRQAIFSCLFC 295
           E DLVLG  EGKECTY   ++KRQAIFSCL C
Sbjct: 28  EADLVLGGDEGKECTYTTGYMKRQAIFSCLTC 59



 Score = 42.0 bits (97), Expect(2) = 1e-10
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -2

Query: 289 PDGNDGICTVCSFSCHGGHKV 227
           PDGN G+CT CS SCH GH++
Sbjct: 61  PDGNAGVCTACSLSCHDGHEI 81


>ref|NP_001242007.1| uncharacterized protein LOC100817441 [Glycine max]
           gi|255636057|gb|ACU18373.1| unknown [Glycine max]
          Length = 420

 Score = 50.1 bits (118), Expect(2) = 2e-10
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = -3

Query: 390 EVDLVLGRYEGKECTYDNCWLKRQAIFSCLFC 295
           E DLVLG  +GKECTY+  ++KRQAIFSCL C
Sbjct: 28  EADLVLGGDDGKECTYNKGYMKRQAIFSCLTC 59



 Score = 42.0 bits (97), Expect(2) = 2e-10
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -2

Query: 289 PDGNDGICTVCSFSCHGGHKV 227
           PDGN G+CT CS SCH GH++
Sbjct: 61  PDGNAGVCTACSLSCHDGHQI 81


>ref|XP_003538132.1| PREDICTED: putative E3 ubiquitin-protein ligase UBR7 [Glycine max]
          Length = 420

 Score = 49.7 bits (117), Expect(2) = 2e-10
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = -3

Query: 390 EVDLVLGRYEGKECTYDNCWLKRQAIFSCLFC 295
           E DLVLG  +GKECTY   ++KRQAIFSCL C
Sbjct: 28  EADLVLGGDDGKECTYSKGYMKRQAIFSCLTC 59



 Score = 42.0 bits (97), Expect(2) = 2e-10
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -2

Query: 289 PDGNDGICTVCSFSCHGGHKV 227
           PDGN G+CT CS SCH GH++
Sbjct: 61  PDGNAGVCTACSLSCHDGHQI 81


>gb|ACU17129.1| unknown [Glycine max]
          Length = 213

 Score = 49.7 bits (117), Expect(2) = 2e-10
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = -3

Query: 390 EVDLVLGRYEGKECTYDNCWLKRQAIFSCLFC 295
           E DLVLG  +GKECTY   ++KRQAIFSCL C
Sbjct: 28  EADLVLGGDDGKECTYSKGYMKRQAIFSCLTC 59



 Score = 42.0 bits (97), Expect(2) = 2e-10
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -2

Query: 289 PDGNDGICTVCSFSCHGGHKV 227
           PDGN G+CT CS SCH GH++
Sbjct: 61  PDGNAGVCTACSLSCHDGHQI 81


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