BLASTX nr result
ID: Coptis21_contig00009400
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00009400 (875 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004143865.1| PREDICTED: putative E3 ubiquitin-protein lig... 51 8e-11 ref|XP_002509962.1| protein binding protein, putative [Ricinus c... 50 1e-10 ref|NP_001242007.1| uncharacterized protein LOC100817441 [Glycin... 50 2e-10 ref|XP_003538132.1| PREDICTED: putative E3 ubiquitin-protein lig... 50 2e-10 gb|ACU17129.1| unknown [Glycine max] 50 2e-10 >ref|XP_004143865.1| PREDICTED: putative E3 ubiquitin-protein ligase UBR7-like [Cucumis sativus] gi|449501781|ref|XP_004161456.1| PREDICTED: putative E3 ubiquitin-protein ligase UBR7-like [Cucumis sativus] Length = 413 Score = 51.2 bits (121), Expect(2) = 8e-11 Identities = 23/32 (71%), Positives = 26/32 (81%) Frame = -3 Query: 390 EVDLVLGRYEGKECTYDNCWLKRQAIFSCLFC 295 E DLVLG EGKECTY+ ++KRQAIFSCL C Sbjct: 28 EADLVLGGDEGKECTYNKGYMKRQAIFSCLTC 59 Score = 42.0 bits (97), Expect(2) = 8e-11 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -2 Query: 289 PDGNDGICTVCSFSCHGGHKV 227 PDGN G+CT CS SCH GH++ Sbjct: 61 PDGNAGVCTACSLSCHDGHEI 81 >ref|XP_002509962.1| protein binding protein, putative [Ricinus communis] gi|223549861|gb|EEF51349.1| protein binding protein, putative [Ricinus communis] Length = 420 Score = 50.4 bits (119), Expect(2) = 1e-10 Identities = 23/32 (71%), Positives = 25/32 (78%) Frame = -3 Query: 390 EVDLVLGRYEGKECTYDNCWLKRQAIFSCLFC 295 E DLVLG EGKECTY ++KRQAIFSCL C Sbjct: 28 EADLVLGGDEGKECTYTTGYMKRQAIFSCLTC 59 Score = 42.0 bits (97), Expect(2) = 1e-10 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -2 Query: 289 PDGNDGICTVCSFSCHGGHKV 227 PDGN G+CT CS SCH GH++ Sbjct: 61 PDGNAGVCTACSLSCHDGHEI 81 >ref|NP_001242007.1| uncharacterized protein LOC100817441 [Glycine max] gi|255636057|gb|ACU18373.1| unknown [Glycine max] Length = 420 Score = 50.1 bits (118), Expect(2) = 2e-10 Identities = 22/32 (68%), Positives = 26/32 (81%) Frame = -3 Query: 390 EVDLVLGRYEGKECTYDNCWLKRQAIFSCLFC 295 E DLVLG +GKECTY+ ++KRQAIFSCL C Sbjct: 28 EADLVLGGDDGKECTYNKGYMKRQAIFSCLTC 59 Score = 42.0 bits (97), Expect(2) = 2e-10 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -2 Query: 289 PDGNDGICTVCSFSCHGGHKV 227 PDGN G+CT CS SCH GH++ Sbjct: 61 PDGNAGVCTACSLSCHDGHQI 81 >ref|XP_003538132.1| PREDICTED: putative E3 ubiquitin-protein ligase UBR7 [Glycine max] Length = 420 Score = 49.7 bits (117), Expect(2) = 2e-10 Identities = 22/32 (68%), Positives = 25/32 (78%) Frame = -3 Query: 390 EVDLVLGRYEGKECTYDNCWLKRQAIFSCLFC 295 E DLVLG +GKECTY ++KRQAIFSCL C Sbjct: 28 EADLVLGGDDGKECTYSKGYMKRQAIFSCLTC 59 Score = 42.0 bits (97), Expect(2) = 2e-10 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -2 Query: 289 PDGNDGICTVCSFSCHGGHKV 227 PDGN G+CT CS SCH GH++ Sbjct: 61 PDGNAGVCTACSLSCHDGHQI 81 >gb|ACU17129.1| unknown [Glycine max] Length = 213 Score = 49.7 bits (117), Expect(2) = 2e-10 Identities = 22/32 (68%), Positives = 25/32 (78%) Frame = -3 Query: 390 EVDLVLGRYEGKECTYDNCWLKRQAIFSCLFC 295 E DLVLG +GKECTY ++KRQAIFSCL C Sbjct: 28 EADLVLGGDDGKECTYSKGYMKRQAIFSCLTC 59 Score = 42.0 bits (97), Expect(2) = 2e-10 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -2 Query: 289 PDGNDGICTVCSFSCHGGHKV 227 PDGN G+CT CS SCH GH++ Sbjct: 61 PDGNAGVCTACSLSCHDGHQI 81