BLASTX nr result

ID: Coptis21_contig00009393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009393
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279942.1| PREDICTED: WUSCHEL-related homeobox 13-like ...   313   6e-83
ref|XP_002272420.1| PREDICTED: WUSCHEL-related homeobox 8 [Vitis...   306   5e-81
emb|CBI37641.3| unnamed protein product [Vitis vinifera]              305   2e-80
ref|XP_002272863.1| PREDICTED: WUSCHEL-related homeobox 13-like ...   301   1e-79
emb|CAN84082.1| hypothetical protein VITISV_018997 [Vitis vinifera]   296   4e-78

>ref|XP_002279942.1| PREDICTED: WUSCHEL-related homeobox 13-like isoform 1 [Vitis
           vinifera]
          Length = 281

 Score =  313 bits (801), Expect = 6e-83
 Identities = 153/251 (60%), Positives = 194/251 (77%), Gaps = 2/251 (0%)
 Frame = +1

Query: 64  NNGMVYVKVMTDEQMELLQKQIAVYTTICEQLVEMHKNVSAQQDLSGVKLGNLYCDSVMT 243
           N G++Y+KVMTD QME+L+KQI+VY TICEQLVEMHK++++ QDL+GV+LGNLYCD +MT
Sbjct: 37  NGGVLYMKVMTDAQMEILRKQISVYATICEQLVEMHKSLTSHQDLAGVRLGNLYCDPLMT 96

Query: 244 SAGNKMTSRQRWTPTTAQLQILERIFEEGIGTPSKQKIKEVTNELMQHGQISETNVYNWF 423
           S G+K+T+RQRWTPT  QLQILERIF++G GTPSKQKIKE+T++L QHGQISETNVYNWF
Sbjct: 97  STGHKITARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWF 156

Query: 424 QNRRARSKRKQMVTAPNSAESEVETEDEFPKEKKTNSENINSNGIMVPRPDEICFQSSEI 603
           QNRRARSKRKQ+VTAPN+A+SEVETE E PK+KKT SEN         RP+++CFQ+ E+
Sbjct: 157 QNRRARSKRKQLVTAPNNADSEVETEVESPKDKKTKSENFLPQQNSASRPEDLCFQNPEL 216

Query: 604 NSLSQ--DPRPHTAAIMFPSDGCSKSTGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFGS 777
            S     D + H    +FPSDG  K +G++  + FY      +  D++ GKME  GS+  
Sbjct: 217 GSRLDFLDQQTHKEEAIFPSDGGIKPSGNLSPVAFY------AGNDHQIGKMEVPGSYNP 270

Query: 778 YRQGEDYDMIG 810
           Y+Q EDY M G
Sbjct: 271 YQQTEDYSMSG 281


>ref|XP_002272420.1| PREDICTED: WUSCHEL-related homeobox 8 [Vitis vinifera]
           gi|297745565|emb|CBI40730.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score =  306 bits (784), Expect = 5e-81
 Identities = 156/251 (62%), Positives = 192/251 (76%), Gaps = 3/251 (1%)
 Frame = +1

Query: 67  NGMVYVKVMTDEQMELLQKQIAVYTTICEQLVEMHKNVSAQQDLSGVKLGNLYCDSVMTS 246
           +G +YVKVMTDEQMELL++QI+VY TICEQLVEMHK ++ QQDL+G++LGN+YCD +M S
Sbjct: 29  SGGLYVKVMTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLAGMRLGNIYCDPLMAS 88

Query: 247 AGNKMTSRQRWTPTTAQLQILERIFEEGIGTPSKQKIKEVTNELMQHGQISETNVYNWFQ 426
           AG+K++SRQRWTPT  QLQILERIF++G GTPSKQKIKE+T EL QHGQISETNVYNWFQ
Sbjct: 89  AGHKISSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQ 148

Query: 427 NRRARSKRKQMVTAPNSAESEVETEDEFPKEKKTNSENINSNGIMVPRPDEICFQSSEIN 606
           NRRARSKRKQ V  PN+A+SEVET+ E PKEKKT  +NI S+       + I FQS E+ 
Sbjct: 149 NRRARSKRKQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHENSALGTENIYFQSPEMG 208

Query: 607 SLSQ--DPRPHTAAIMFPSDGCSKSTGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFGSY 780
           S     D +P+    MFPSD   +S+GS+G+   YE+ + N R D   GK+E  GSF  Y
Sbjct: 209 SEMHCLDTQPNKGEPMFPSDRSLRSSGSLGHSSLYETGVPNPRMDQLIGKVEVPGSFSPY 268

Query: 781 RQ-GEDYDMIG 810
           RQ GE +DM+G
Sbjct: 269 RQGGEGFDMVG 279


>emb|CBI37641.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  305 bits (780), Expect = 2e-80
 Identities = 150/245 (61%), Positives = 189/245 (77%), Gaps = 2/245 (0%)
 Frame = +1

Query: 82  VKVMTDEQMELLQKQIAVYTTICEQLVEMHKNVSAQQDLSGVKLGNLYCDSVMTSAGNKM 261
           +KVMTD QME+L+KQI+VY TICEQLVEMHK++++ QDL+GV+LGNLYCD +MTS G+K+
Sbjct: 1   MKVMTDAQMEILRKQISVYATICEQLVEMHKSLTSHQDLAGVRLGNLYCDPLMTSTGHKI 60

Query: 262 TSRQRWTPTTAQLQILERIFEEGIGTPSKQKIKEVTNELMQHGQISETNVYNWFQNRRAR 441
           T+RQRWTPT  QLQILERIF++G GTPSKQKIKE+T++L QHGQISETNVYNWFQNRRAR
Sbjct: 61  TARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWFQNRRAR 120

Query: 442 SKRKQMVTAPNSAESEVETEDEFPKEKKTNSENINSNGIMVPRPDEICFQSSEINSLSQ- 618
           SKRKQ+VTAPN+A+SEVETE E PK+KKT SEN         RP+++CFQ+ E+ S    
Sbjct: 121 SKRKQLVTAPNNADSEVETEVESPKDKKTKSENFLPQQNSASRPEDLCFQNPELGSRLDF 180

Query: 619 -DPRPHTAAIMFPSDGCSKSTGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFGSYRQGED 795
            D + H    +FPSDG  K +G++  + FY      +  D++ GKME  GS+  Y+Q ED
Sbjct: 181 LDQQTHKEEAIFPSDGGIKPSGNLSPVAFY------AGNDHQIGKMEVPGSYNPYQQTED 234

Query: 796 YDMIG 810
           Y M G
Sbjct: 235 YSMSG 239


>ref|XP_002272863.1| PREDICTED: WUSCHEL-related homeobox 13-like [Vitis vinifera]
          Length = 276

 Score =  301 bits (772), Expect = 1e-79
 Identities = 148/251 (58%), Positives = 189/251 (75%), Gaps = 2/251 (0%)
 Frame = +1

Query: 64  NNGMVYVKVMTDEQMELLQKQIAVYTTICEQLVEMHKNVSAQQDLSGVKLGNLYCDSVMT 243
           N G+ YVKVMTD Q+E+L+KQI+VY TICEQLVEMHK++++ QDL+GV+LGNLYCD +MT
Sbjct: 32  NGGVFYVKVMTDAQVEILRKQISVYATICEQLVEMHKSLTSHQDLAGVRLGNLYCDPLMT 91

Query: 244 SAGNKMTSRQRWTPTTAQLQILERIFEEGIGTPSKQKIKEVTNELMQHGQISETNVYNWF 423
           S G+K+++RQRWTPT  QLQILERIF++G GTPSKQKIKE+T++L QHGQISETNVYNWF
Sbjct: 92  STGHKISARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDLSQHGQISETNVYNWF 151

Query: 424 QNRRARSKRKQMVTAPNSAESEVETEDEFPKEKKTNSENINSNGIMVPRPDEICFQSSEI 603
           QNRRA+SKRKQ++T PN+AESEV TE E PK++KT SEN         RP+++CFQ+ EI
Sbjct: 152 QNRRAQSKRKQLITMPNNAESEVATEVESPKDQKTKSENFLPQQNSASRPEDLCFQNPEI 211

Query: 604 NSLSQ--DPRPHTAAIMFPSDGCSKSTGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFGS 777
            S     D + H    +FPSDG  K +G+   + FY      +  D++ GKME  GS+  
Sbjct: 212 GSRLHFLDQQTHKEENIFPSDGGIKPSGNPSQVAFY------AGNDHQIGKMEVPGSYNP 265

Query: 778 YRQGEDYDMIG 810
           Y+  EDY M G
Sbjct: 266 YQHTEDYSMTG 276


>emb|CAN84082.1| hypothetical protein VITISV_018997 [Vitis vinifera]
          Length = 243

 Score =  296 bits (759), Expect = 4e-78
 Identities = 151/243 (62%), Positives = 185/243 (76%), Gaps = 3/243 (1%)
 Frame = +1

Query: 91  MTDEQMELLQKQIAVYTTICEQLVEMHKNVSAQQDLSGVKLGNLYCDSVMTSAGNKMTSR 270
           MTDEQMELL++QI+VY TICEQLVEMHK ++ QQDL+G++LGN+YCD +M SAG+K++SR
Sbjct: 1   MTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLAGMRLGNIYCDPLMASAGHKISSR 60

Query: 271 QRWTPTTAQLQILERIFEEGIGTPSKQKIKEVTNELMQHGQISETNVYNWFQNRRARSKR 450
           QRWTPT  QLQILERIF++G GTPSKQKIKE+T EL QHGQISETNVYNWFQNRRARSKR
Sbjct: 61  QRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQNRRARSKR 120

Query: 451 KQMVTAPNSAESEVETEDEFPKEKKTNSENINSNGIMVPRPDEICFQSSEINSLSQ--DP 624
           KQ V  PN+A+SEVET+ E PKEKKT  +NI S+       + I FQS E+ S     D 
Sbjct: 121 KQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHENSALGTENIYFQSPEMGSEMHCLDT 180

Query: 625 RPHTAAIMFPSDGCSKSTGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFGSYRQ-GEDYD 801
           +P+    MFPSD   +S+GS+G+   YE+ + N R D   GK+E  GSF  YRQ GE +D
Sbjct: 181 QPNKGEPMFPSDHSLRSSGSLGHSSLYEAGVPNPRMDQLIGKVEVPGSFSPYRQGGEGFD 240

Query: 802 MIG 810
           M+G
Sbjct: 241 MVG 243


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