BLASTX nr result

ID: Coptis21_contig00009389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009389
         (1901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518471.1| prephenate dehydratase, putative [Ricinus co...   494   e-137
ref|XP_002316535.1| arogenate/prephenate dehydratase [Populus tr...   491   e-136
ref|XP_002305566.1| arogenate/prephenate dehydratase [Populus tr...   486   e-135
gb|ABR17815.1| unknown [Picea sitchensis]                             482   e-133
ref|XP_002268124.2| PREDICTED: arogenate dehydratase/prephenate ...   481   e-133

>ref|XP_002518471.1| prephenate dehydratase, putative [Ricinus communis]
            gi|223542316|gb|EEF43858.1| prephenate dehydratase,
            putative [Ricinus communis]
          Length = 403

 Score =  494 bits (1272), Expect = e-137
 Identities = 251/364 (68%), Positives = 297/364 (81%), Gaps = 14/364 (3%)
 Frame = +2

Query: 206  NWKRDVVS-----CVLGGKQAAITPVEDDGHLSPSAQS---------VELSGIQRNMNVL 343
            NW  D  S     C+    Q AITPVED+   +P  +S          + S   +++N+L
Sbjct: 39   NWDSDRFSKGEWCCLAVLAQRAITPVEDEKPCTPEVESSQAIEKVQDTQSSSFHKDLNLL 98

Query: 344  PRPLTSKDLSPSSDGCSNVRVAYKGAPGAFSEAAALKAYPLCETVPCEEFEAAFKAVELW 523
            P+PL++ D+S S D  + VRVAY+G  GA+SEAA LKAYP CETVPCE FEA FKAVELW
Sbjct: 99   PKPLSATDISSSRDDGTKVRVAYQGIAGAYSEAAVLKAYPKCETVPCEHFEAVFKAVELW 158

Query: 524  VVNKAVLPIESSVGGSVHRNYDLLLRHSLHIVGEVQMVVQHCLLGLPGVRMEELKRVISH 703
            +V+KAVLPIE+SVGGS+HRNYDLLLRH LHIVGEVQM V HCLLGLPGV+ +ELK+V+SH
Sbjct: 159  LVDKAVLPIENSVGGSIHRNYDLLLRHRLHIVGEVQMAVNHCLLGLPGVQKQELKQVLSH 218

Query: 704  PQALAQCKISLNKLAVVKESVDDTAGAAQLVASSNLRDTGAIASARAAEIYGLNILAERI 883
            PQAL+ C+++L++L VV+ S DDTAGAAQ+VA+   RDTGAIASARAAEIYGL ILAE+ 
Sbjct: 219  PQALSHCEMTLSELGVVRVSTDDTAGAAQMVATGGTRDTGAIASARAAEIYGLEILAEKF 278

Query: 884  EDDSDNNITRFLILSREPVIPRADRPFKTSIVFTLEEGPGILFKALAVFALRGINMTKIE 1063
            +DD D+NITRFLIL+REPVIP  DR +KTSIVFTLEEGPGILFKALAVFALRGIN+TKIE
Sbjct: 279  QDD-DDNITRFLILAREPVIPGTDRSYKTSIVFTLEEGPGILFKALAVFALRGINLTKIE 337

Query: 1064 SRPQRKRPMRVVDECDSGSAKYFDYLFYIDFEASMAEPRAQNALGHLQELAPFLRVLGCY 1243
            SRPQ+ RP+RVVD+ + GSA+YFDYLFYIDFEASMAEPRAQ+ALGHLQE A FLRVLGCY
Sbjct: 338  SRPQKNRPLRVVDDSNKGSARYFDYLFYIDFEASMAEPRAQSALGHLQEFARFLRVLGCY 397

Query: 1244 PIDT 1255
            P+DT
Sbjct: 398  PMDT 401


>ref|XP_002316535.1| arogenate/prephenate dehydratase [Populus trichocarpa]
            gi|222859600|gb|EEE97147.1| arogenate/prephenate
            dehydratase [Populus trichocarpa]
          Length = 400

 Score =  491 bits (1265), Expect = e-136
 Identities = 246/344 (71%), Positives = 292/344 (84%), Gaps = 9/344 (2%)
 Frame = +2

Query: 248  QAAITPVEDDGHLSPSA---------QSVELSGIQRNMNVLPRPLTSKDLSPSSDGCSNV 400
            Q AITPVED+   +P           Q  +  G  +++N+LP+PL++ DLS S    + V
Sbjct: 55   QRAITPVEDEKPSAPQVDTSRATDQVQDTQSRGFHKDLNLLPKPLSAADLSSSPGNGAQV 114

Query: 401  RVAYKGAPGAFSEAAALKAYPLCETVPCEEFEAAFKAVELWVVNKAVLPIESSVGGSVHR 580
            RVAY+G PGA+SEAAALKAYP CETVPC++FEAAFKAVELW+V+KAVLPIE+SVGGS+HR
Sbjct: 115  RVAYQGIPGAYSEAAALKAYPKCETVPCDQFEAAFKAVELWLVDKAVLPIENSVGGSIHR 174

Query: 581  NYDLLLRHSLHIVGEVQMVVQHCLLGLPGVRMEELKRVISHPQALAQCKISLNKLAVVKE 760
            NYDLLLRH LHIVGEVQMVV HCLLGLPGV  EELKRV+SHPQALAQC+++L KL +++ 
Sbjct: 175  NYDLLLRHRLHIVGEVQMVVNHCLLGLPGVPKEELKRVLSHPQALAQCEMTLTKLGIIRV 234

Query: 761  SVDDTAGAAQLVASSNLRDTGAIASARAAEIYGLNILAERIEDDSDNNITRFLILSREPV 940
            S DD+AGAAQ+V ++  RDTGAIASARAA+IYGLNIL E+I+DD D+NITRFLIL+REP+
Sbjct: 235  SADDSAGAAQMVVANGERDTGAIASARAADIYGLNILLEKIQDD-DDNITRFLILAREPM 293

Query: 941  IPRADRPFKTSIVFTLEEGPGILFKALAVFALRGINMTKIESRPQRKRPMRVVDECDSGS 1120
            IP ++RP KTSIVFTLEEGPG+LFKALAVFALR IN+TKIESRPQRKRP+RVVD+ + GS
Sbjct: 294  IPGSNRPHKTSIVFTLEEGPGMLFKALAVFALRDINLTKIESRPQRKRPLRVVDDSNKGS 353

Query: 1121 AKYFDYLFYIDFEASMAEPRAQNALGHLQELAPFLRVLGCYPID 1252
            A+YFDYLFYIDF+ASMAEPRAQ+AL HLQE A FLRVLGCYP D
Sbjct: 354  ARYFDYLFYIDFDASMAEPRAQHALAHLQEFARFLRVLGCYPTD 397


>ref|XP_002305566.1| arogenate/prephenate dehydratase [Populus trichocarpa]
            gi|222848530|gb|EEE86077.1| arogenate/prephenate
            dehydratase [Populus trichocarpa]
          Length = 397

 Score =  486 bits (1252), Expect = e-135
 Identities = 248/346 (71%), Positives = 286/346 (82%), Gaps = 9/346 (2%)
 Frame = +2

Query: 248  QAAITPVEDDGHLSPSAQSVEL---------SGIQRNMNVLPRPLTSKDLSPSSDGCSNV 400
            Q AITPVED+  L P  ++ E           G  +++N+LP+PL++ D+  S    + V
Sbjct: 52   QRAITPVEDEKPLIPQVETSEAIDQVQDTQSRGFHKDLNLLPKPLSATDIFSSPRNSAKV 111

Query: 401  RVAYKGAPGAFSEAAALKAYPLCETVPCEEFEAAFKAVELWVVNKAVLPIESSVGGSVHR 580
            RVAY+G PGA+ EAAALKAYP CETVPCEEFEAAFKAVELW+V+KAVLPIESSVGGS+HR
Sbjct: 112  RVAYQGMPGAYGEAAALKAYPKCETVPCEEFEAAFKAVELWLVDKAVLPIESSVGGSIHR 171

Query: 581  NYDLLLRHSLHIVGEVQMVVQHCLLGLPGVRMEELKRVISHPQALAQCKISLNKLAVVKE 760
            NYDLLLRH LHIVGEVQMVV HCLLGLPGV+ EELKRV+SHPQAL QC + L KL VV+ 
Sbjct: 172  NYDLLLRHRLHIVGEVQMVVNHCLLGLPGVQKEELKRVLSHPQALDQCDMILTKLGVVRV 231

Query: 761  SVDDTAGAAQLVASSNLRDTGAIASARAAEIYGLNILAERIEDDSDNNITRFLILSREPV 940
            S DDTAGAA +VA+S  RD+G IAS RAAEIYGLNIL E+I+DD D+NITRFLIL+REP+
Sbjct: 232  STDDTAGAALMVAASGERDSGVIASDRAAEIYGLNILLEKIQDD-DDNITRFLILAREPI 290

Query: 941  IPRADRPFKTSIVFTLEEGPGILFKALAVFALRGINMTKIESRPQRKRPMRVVDECDSGS 1120
            IP  DRP KTSIVFTLEEGPG+LFKALAVFA R IN+TKIESRPQRKRP+RVVD+ + GS
Sbjct: 291  IPGTDRPHKTSIVFTLEEGPGMLFKALAVFASRDINLTKIESRPQRKRPLRVVDDSNKGS 350

Query: 1121 AKYFDYLFYIDFEASMAEPRAQNALGHLQELAPFLRVLGCYPIDTA 1258
            A+YFDYLFYIDFEASMAEPRAQ+A+ HLQE A FLRVLGCY  D+A
Sbjct: 351  ARYFDYLFYIDFEASMAEPRAQHAMAHLQEFASFLRVLGCYATDSA 396


>gb|ABR17815.1| unknown [Picea sitchensis]
          Length = 402

 Score =  482 bits (1240), Expect = e-133
 Identities = 235/317 (74%), Positives = 281/317 (88%)
 Frame = +2

Query: 302  SVELSGIQRNMNVLPRPLTSKDLSPSSDGCSNVRVAYKGAPGAFSEAAALKAYPLCETVP 481
            S+E   + +++  LPRPL+  DL+      S VRVAY+G PGA+SEAAALKAYP CE VP
Sbjct: 80   SLESGTVPKDLVSLPRPLSVTDLATPPSHGSQVRVAYQGVPGAYSEAAALKAYPQCEAVP 139

Query: 482  CEEFEAAFKAVELWVVNKAVLPIESSVGGSVHRNYDLLLRHSLHIVGEVQMVVQHCLLGL 661
            CE+FEAAF+AVELW+V+KAVLPIE+S+GGS+HRNYDLLLRH LHIVGEVQ+ V HCLLGL
Sbjct: 140  CEQFEAAFQAVELWLVDKAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVQLAVHHCLLGL 199

Query: 662  PGVRMEELKRVISHPQALAQCKISLNKLAVVKESVDDTAGAAQLVASSNLRDTGAIASAR 841
            PGV+ EELKRV+SHPQAL+QC+ +L+ L V++E+ DDTAGAAQ +A++NLRDTGA+ASAR
Sbjct: 200  PGVKKEELKRVVSHPQALSQCEHTLSTLGVIREAADDTAGAAQFIAANNLRDTGAVASAR 259

Query: 842  AAEIYGLNILAERIEDDSDNNITRFLILSREPVIPRADRPFKTSIVFTLEEGPGILFKAL 1021
            AAEIYGL ILA+ I+DDSD N+TRFL+L+REP+IPR DRPFKTSIVFTLEEGPG+LFKAL
Sbjct: 260  AAEIYGLQILADGIQDDSD-NVTRFLMLAREPIIPRIDRPFKTSIVFTLEEGPGVLFKAL 318

Query: 1022 AVFALRGINMTKIESRPQRKRPMRVVDECDSGSAKYFDYLFYIDFEASMAEPRAQNALGH 1201
            AVFALR IN+TKIESRPQRKRP+RVVD+ ++G+AKYFDYLFYIDFEASMA+PRAQNALGH
Sbjct: 319  AVFALRDINLTKIESRPQRKRPLRVVDDSNTGAAKYFDYLFYIDFEASMADPRAQNALGH 378

Query: 1202 LQELAPFLRVLGCYPID 1252
            LQE A F+RVLG YP+D
Sbjct: 379  LQEFATFMRVLGSYPMD 395


>ref|XP_002268124.2| PREDICTED: arogenate dehydratase/prephenate dehydratase 1,
            chloroplastic-like [Vitis vinifera]
          Length = 575

 Score =  481 bits (1238), Expect = e-133
 Identities = 249/378 (65%), Positives = 295/378 (78%), Gaps = 14/378 (3%)
 Frame = +2

Query: 161  LSSIDSSYKRTGLVLNWKRDVV-----SCVLGGKQAAITPVEDDGHLSPSAQS------- 304
            L   D   +R G  LN + D        C+    Q A  PVED+  L P  +S       
Sbjct: 87   LGLADLGGRRAGRALNLRFDFERFRKWECLAVLGQRATIPVEDEKPLRPGVESPGGADEA 146

Query: 305  --VELSGIQRNMNVLPRPLTSKDLSPSSDGCSNVRVAYKGAPGAFSEAAALKAYPLCETV 478
               E     R++N LPRPL++ D S S      VRVAY+GAPGA+SE AA+KAYP CE V
Sbjct: 147  KETEPRAFHRDLNSLPRPLSATDPSSSPSNGGKVRVAYQGAPGAYSEEAAMKAYPKCEAV 206

Query: 479  PCEEFEAAFKAVELWVVNKAVLPIESSVGGSVHRNYDLLLRHSLHIVGEVQMVVQHCLLG 658
            PC++FEAAFKAVELW+V KAVLPIE+SVGGS+HRNYDLLL H LHIVGEVQMVV HCLLG
Sbjct: 207  PCDDFEAAFKAVELWLVEKAVLPIENSVGGSIHRNYDLLLGHRLHIVGEVQMVVNHCLLG 266

Query: 659  LPGVRMEELKRVISHPQALAQCKISLNKLAVVKESVDDTAGAAQLVASSNLRDTGAIASA 838
            LPGVR +ELKRV+SHPQA AQC ++LN+L +++ S +DTAGAAQ+VAS  L++TGAIASA
Sbjct: 267  LPGVRKDELKRVLSHPQAFAQCDMTLNELGLLRISTEDTAGAAQIVASDGLKNTGAIASA 326

Query: 839  RAAEIYGLNILAERIEDDSDNNITRFLILSREPVIPRADRPFKTSIVFTLEEGPGILFKA 1018
            RAA IYGLNIL E+I+DD D NITRFLIL+REP+IP  +RP+KTSIVF+L+EGPG+LFKA
Sbjct: 327  RAAVIYGLNILEEKIQDDCD-NITRFLILAREPIIPGLERPYKTSIVFSLDEGPGVLFKA 385

Query: 1019 LAVFALRGINMTKIESRPQRKRPMRVVDECDSGSAKYFDYLFYIDFEASMAEPRAQNALG 1198
            LAVFALR I+++KIESRPQRKRP+R+VD+ + GSAKYFDYLFYIDFEASMAEPRAQ ALG
Sbjct: 386  LAVFALRDISLSKIESRPQRKRPLRIVDDSNKGSAKYFDYLFYIDFEASMAEPRAQYALG 445

Query: 1199 HLQELAPFLRVLGCYPID 1252
            HLQE A FLRVLGCYP+D
Sbjct: 446  HLQEFARFLRVLGCYPMD 463


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