BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009382
         (1896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518046.1| ubiquitin-protein ligase, putative [Ricinus ...    61   9e-07
ref|NP_175163.1| F-box protein [Arabidopsis thaliana] gi|2298075...    60   2e-06
ref|XP_003598343.1| F-box/kelch-repeat protein [Medicago truncat...    60   2e-06
gb|ACU22680.1| unknown [Glycine max]                                   58   8e-06

>ref|XP_002518046.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223542642|gb|EEF44179.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 257

 Score = 61.2 bits (147), Expect = 9e-07
 Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 1/176 (0%)
 Frame = -2

Query: 1415 LPEEITLEILFRLTAEDLSSWKCVSKLWSSFISRPTFGNAHLQRQQEEQGIIFTTVAKPT 1236
            LP+++  EIL R+  + L  +KC+ K W+S IS P F    L+R +E   +         
Sbjct: 4    LPQDLITEILSRVPVKPLIRFKCICKTWNSLISNPEFAKLQLKRAKENNNV--------- 54

Query: 1235 NIIPNYQYNHFSITLTPPIPPSLNPRKELKIPF-HKLKKWGTEEQVVDENDKEAVLCLRA 1059
                    NH+ + L    P SL+          + L+K        D ND   V  L  
Sbjct: 55   -------SNHYRLLLATWPPQSLDYEAYCNDDISNALRKLSYHAIAKDPNDNYDVRIL-G 106

Query: 1058 SCDGLLLFQNKYNPLLLYISNPITSHFQALPPTKNPCSNWALFPDHHSASVGKYKV 891
            SCDGL+   N+Y+   +++ NP    ++ LP          L+   ++ +   Y+V
Sbjct: 107  SCDGLVYLYNEYHD-SMFLWNPTIGDYKELPKPNGAFHGMYLYGIGYNVNNDDYEV 161


>ref|NP_175163.1| F-box protein [Arabidopsis thaliana]
            gi|229807540|sp|Q9FX02.2|FB38_ARATH RecName:
            Full=Putative F-box protein At1g47300
            gi|332194033|gb|AEE32154.1| F-box protein [Arabidopsis
            thaliana]
          Length = 306

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 45/155 (29%), Positives = 75/155 (48%)
 Frame = -2

Query: 1421 DSLPEEITLEILFRLTAEDLSSWKCVSKLWSSFISRPTFGNAHLQRQQEEQGIIFTTVAK 1242
            DS+P+E+ LEI+ RL A+ ++ + CVSK W+S +SRP F    L     +  ++F     
Sbjct: 4    DSIPKELILEIMLRLPAKSIARFHCVSKQWASMLSRPYFTELFLTSSSTQPRLLFA---- 59

Query: 1241 PTNIIPNYQYNHFSITLTPPIPPSLNPRKELKIPFHKLKKWGTEEQVVDENDKEAVLCLR 1062
               I  N  +  FS+        + +    +   FH +K    + Q+   ++   + C  
Sbjct: 60   ---IKRNGLWCFFSLPKHQSPYDNSSSSLVVAADFH-MKFLPNKIQMYSSSENRKLSCCY 115

Query: 1061 ASCDGLLLFQNKYNPLLLYISNPITSHFQALPPTK 957
            AS  GL  F + Y+ + + I NPIT  + +LP  K
Sbjct: 116  AS--GLTYFYDMYSEVRV-ICNPITGRYASLPYLK 147


>ref|XP_003598343.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355487391|gb|AES68594.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 360

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 51/192 (26%), Positives = 82/192 (42%)
 Frame = -2

Query: 1418 SLPEEITLEILFRLTAEDLSSWKCVSKLWSSFISRPTFGNAHLQRQQEEQGIIFTTVAKP 1239
            +LP ++  EILFRL  + L   +C+ K ++S IS P F   HLQ   +   +    + K 
Sbjct: 24   TLPFDVLPEILFRLPVKLLVQLRCLCKFFNSLISDPKFAKKHLQLSTKRHHL----MRKC 79

Query: 1238 TNIIPNYQYNHFSITLTPPIPPSLNPRKELKIPFHKLKKWGTEEQVVDENDKEAVLCLRA 1059
             NI      +   +    PIP   +    +           T+ Q+   N  +    ++ 
Sbjct: 80   RNI------SRELVLYDSPIPSVFSTSTVV-----------TQTQLYPPNG-DTYTSVKC 121

Query: 1058 SCDGLLLFQNKYNPLLLYISNPITSHFQALPPTKNPCSNWALFPDHHSASVGKYKVFAIL 879
            SCDG  +F  K N    ++ NP    FQ LPP KNP  ++      +  S+  YKV  + 
Sbjct: 122  SCDG--IFCGKLNNGSYFLWNPSIRKFQLLPPLKNPYEDYFSISFGYDHSIDNYKVILVS 179

Query: 878  GRSLFRTLTVRT 843
             ++     T+ T
Sbjct: 180  DKNEVSVNTLGT 191


>gb|ACU22680.1| unknown [Glycine max]
          Length = 393

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 57/199 (28%), Positives = 81/199 (40%), Gaps = 8/199 (4%)
 Frame = -2

Query: 1454 RHNYSGSSCYFDSLPEEITLEILFRLTAEDLSSWKCVSKLWSSFISRPTFGNAHLQRQQE 1275
            R   + SS +  +LP E+  EIL RL  + L   +CV K W S IS P F   HL     
Sbjct: 34   RQTLTSSSSHTHTLPIELIQEILQRLPVKFLLQLRCVCKSWKSLISHPQFAKNHLHSSPT 93

Query: 1274 EQGII--FTTVAKPTNIIPNYQ----YNHFSITLTPPIPPSLNPRKELKIPFHKLKKWGT 1113
               +I  FT+ A+   I+  Y     +N  ++  T           EL+ PF        
Sbjct: 94   ATRLIAGFTSPAREF-ILRAYPLSDVFNAVAVNAT-----------ELRCPF-------- 133

Query: 1112 EEQVVDENDKEAVLCLRASCDGLLLFQNKYNPLLLYISNPITSHFQALPPTKNPCSN--W 939
                   N+++    +  SCDG+L F       LL+  NP    F+ LPP  N   N  +
Sbjct: 134  -------NNRKCYDFIVGSCDGILCFAVDQRRALLW--NPSIGKFKKLPPLDNERRNGSY 184

Query: 938  ALFPDHHSASVGKYKVFAI 882
             +    +      YKV AI
Sbjct: 185  TIHGFGYDRFADSYKVVAI 203