BLASTX nr result
ID: Coptis21_contig00009377
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009377
(1464 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631761.1| PREDICTED: transcription initiation factor T... 788 0.0
ref|XP_002285276.2| PREDICTED: transcription initiation factor T... 786 0.0
ref|XP_002515435.1| protein with unknown function [Ricinus commu... 778 0.0
ref|XP_002309672.1| predicted protein [Populus trichocarpa] gi|2... 776 0.0
ref|XP_004145505.1| PREDICTED: transcription initiation factor T... 773 0.0
>ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3|
unnamed protein product [Vitis vinifera]
Length = 676
Score = 788 bits (2035), Expect = 0.0
Identities = 386/491 (78%), Positives = 428/491 (87%), Gaps = 6/491 (1%)
Frame = -2
Query: 1463 MLGIINEHINFQVSPGQPISISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLE 1284
MLG+INEHINFQVSPGQP SISDDA+ V L+GSSQD A QIN+KEI WGLL S+E+RLE
Sbjct: 185 MLGVINEHINFQVSPGQPASISDDAEVVTLIGSSQDDANQINQKEIHWGLLEGSLEERLE 244
Query: 1283 KASSLMFDSEKTEGEIKEGDVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNT 1104
KA L+ DSEK EGE+KE D +ENKKRS +GGKQG+S+KKLKKDK+VG GK+ R E N
Sbjct: 245 KAGGLLSDSEKAEGEVKETDTEENKKRSAEGGKQGSSIKKLKKDKVVGAAGKTARPEANA 304
Query: 1103 VSMAPRVKPELTLPVLPTEVEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS 924
VSMAPRVKPEL LPV+PTEVE SILEDLRNRVQL S ALPSV FYTF+NTHN LNCSSIS
Sbjct: 305 VSMAPRVKPELALPVMPTEVEQSILEDLRNRVQLSSMALPSVSFYTFINTHNSLNCSSIS 364
Query: 923 QDGSLVAGGFSDSSLKVWDMAKIGQ----ATVQGENG-TPTEQLLGSENGRRSYTLLQGH 759
DGSLVAGGFSDSSLKVWDM+K+GQ + +QG+N PTEQ+LG+ G+RSYTL QGH
Sbjct: 365 HDGSLVAGGFSDSSLKVWDMSKLGQQAATSIMQGDNDLAPTEQILGTSGGKRSYTLFQGH 424
Query: 758 AGPVYSSTFSPLGDFILSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFAS 579
+GPVYS+TFSPLGDFILSSS+DSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFAS
Sbjct: 425 SGPVYSATFSPLGDFILSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFAS 484
Query: 578 SSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECV 399
SSHDRTARIWSMDRIQPLRIMAGHLSDVDCV+WH NCNYIATGSSDKTVRLWDVQSGECV
Sbjct: 485 SSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHINCNYIATGSSDKTVRLWDVQSGECV 544
Query: 398 RIFIGHRSMILSLAMSPDGRYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFXXX 219
RIFIGHRSM+LSLAMSPDG+YMASGDE+GTIMMWDLSSGRC+ PLMGH SCVW+L F
Sbjct: 545 RIFIGHRSMVLSLAMSPDGQYMASGDEDGTIMMWDLSSGRCVMPLMGHMSCVWSLAFSCE 604
Query: 218 XXXXXXXXADCTVKLWDVTASTKAPKMDE-KAGCPNRLRSLKTLPTKCSPVYTVQFSRRN 42
AD TVKLWDVT STK P+ +E K+G +RLRSLKTLPTK +PVY+++FSRRN
Sbjct: 605 GSLLASGSADSTVKLWDVTTSTKVPRSEENKSGNTSRLRSLKTLPTKSTPVYSLRFSRRN 664
Query: 41 LLFAAGVLSRS 9
LLFAAG LS+S
Sbjct: 665 LLFAAGALSKS 675
>ref|XP_002285276.2| PREDICTED: transcription initiation factor TFIID subunit 5-like
isoform 1 [Vitis vinifera]
Length = 667
Score = 786 bits (2029), Expect = 0.0
Identities = 385/490 (78%), Positives = 426/490 (86%), Gaps = 5/490 (1%)
Frame = -2
Query: 1463 MLGIINEHINFQVSPGQPISISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLE 1284
MLG+INEHINFQVSPGQP SISDDA+ V L+GSSQD A QIN+KEI WGLL S+E+RLE
Sbjct: 178 MLGVINEHINFQVSPGQPASISDDAEVVTLIGSSQDDANQINQKEIHWGLLEGSLEERLE 237
Query: 1283 KASSLMFDSEKTEGEIKEGDVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNT 1104
KA L+ DSEK EGE+KE D +ENKKRS +GGKQG+S+KKLKKDK+VG GK+ R E N
Sbjct: 238 KAGGLLSDSEKAEGEVKETDTEENKKRSAEGGKQGSSIKKLKKDKVVGAAGKTARPEANA 297
Query: 1103 VSMAPRVKPELTLPVLPTEVEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS 924
VSMAPRVKPEL LPV+PTEVE SILEDLRNRVQL S ALPSV FYTF+NTHN LNCSSIS
Sbjct: 298 VSMAPRVKPELALPVMPTEVEQSILEDLRNRVQLSSMALPSVSFYTFINTHNSLNCSSIS 357
Query: 923 QDGSLVAGGFSDSSLKVWDMAKIGQ----ATVQGENG-TPTEQLLGSENGRRSYTLLQGH 759
DGSLVAGGFSDSSLKVWDM+K+GQ + +QG+N PTEQ+LG+ G+RSYTL QGH
Sbjct: 358 HDGSLVAGGFSDSSLKVWDMSKLGQQAATSIMQGDNDLAPTEQILGTSGGKRSYTLFQGH 417
Query: 758 AGPVYSSTFSPLGDFILSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFAS 579
+GPVYS+TFSPLGDFILSSS+DSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFAS
Sbjct: 418 SGPVYSATFSPLGDFILSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFAS 477
Query: 578 SSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECV 399
SSHDRTARIWSMDRIQPLRIMAGHLSDVDCV+WH NCNYIATGSSDKTVRLWDVQSGECV
Sbjct: 478 SSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHINCNYIATGSSDKTVRLWDVQSGECV 537
Query: 398 RIFIGHRSMILSLAMSPDGRYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFXXX 219
RIFIGHRSM+LSLAMSPDG+YMASGDE+GTIMMWDLSSGRC+ PLMGH SCVW+L F
Sbjct: 538 RIFIGHRSMVLSLAMSPDGQYMASGDEDGTIMMWDLSSGRCVMPLMGHMSCVWSLAFSCE 597
Query: 218 XXXXXXXXADCTVKLWDVTASTKAPKMDEKAGCPNRLRSLKTLPTKCSPVYTVQFSRRNL 39
AD TVKLWDVT STK P+ +E G +RLRSLKTLPTK +PVY+++FSRRNL
Sbjct: 598 GSLLASGSADSTVKLWDVTTSTKVPRSEEN-GNTSRLRSLKTLPTKSTPVYSLRFSRRNL 656
Query: 38 LFAAGVLSRS 9
LFAAG LS+S
Sbjct: 657 LFAAGALSKS 666
>ref|XP_002515435.1| protein with unknown function [Ricinus communis]
gi|223545379|gb|EEF46884.1| protein with unknown function
[Ricinus communis]
Length = 670
Score = 778 bits (2010), Expect = 0.0
Identities = 385/491 (78%), Positives = 425/491 (86%), Gaps = 6/491 (1%)
Frame = -2
Query: 1463 MLGIINEHINFQVSPGQPISISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLE 1284
MLGI+NEHINFQVSPGQP SISDD + V L+GSSQD A QIN+KEI WGLL DS+E+ LE
Sbjct: 179 MLGIVNEHINFQVSPGQPSSISDDDEVVTLIGSSQDAANQINKKEIHWGLLEDSMEEHLE 238
Query: 1283 KASSLMFDSEKTEGEIKEGDVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNT 1104
KA L DSEKTEGE KEGD+DE+KKRS +GGKQGTSVKK+KKDK T K VR ETN+
Sbjct: 239 KAGGLHSDSEKTEGEAKEGDMDESKKRSIEGGKQGTSVKKMKKDKATSATAKVVRPETNS 298
Query: 1103 VSMAPRVKPELTLPVLPTEVEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS 924
APRVKPEL LPV+PTEVE SILEDLRNRVQL SAALPSV FYTF+NTHNGLNCSSIS
Sbjct: 299 APTAPRVKPELPLPVIPTEVEQSILEDLRNRVQLSSAALPSVSFYTFINTHNGLNCSSIS 358
Query: 923 QDGSLVAGGFSDSSLKVWDMAKIGQ----ATVQGENGTP-TEQLLGSENGRRSYTLLQGH 759
DGSLVAGGFSDSSLKVWDMAK+GQ + +QG N T +E LG+ +RSYTL QGH
Sbjct: 359 HDGSLVAGGFSDSSLKVWDMAKLGQQGSNSVLQGANDTAASEHFLGANGAKRSYTLFQGH 418
Query: 758 AGPVYSSTFSPLGDFILSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFAS 579
+GPVYS+TFSPLGDFILSSS+D+TIRLWSTKLNANLVCYKGHNYPVWDVQFSP+GHYFAS
Sbjct: 419 SGPVYSATFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFAS 478
Query: 578 SSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECV 399
+SHDRTARIWSMDR+QPLRI+AGHLSDVDCV+WHANCNYIATGSSDKTVRLWDVQSGECV
Sbjct: 479 ASHDRTARIWSMDRLQPLRILAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECV 538
Query: 398 RIFIGHRSMILSLAMSPDGRYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFXXX 219
RIFIGHRSMILSLAMSPDGR+MAS DE+GTIMMWDLSSGRC++PLMGH SCVWTL F
Sbjct: 539 RIFIGHRSMILSLAMSPDGRFMASADEDGTIMMWDLSSGRCVSPLMGHNSCVWTLAFSCE 598
Query: 218 XXXXXXXXADCTVKLWDVTASTKAPKMDE-KAGCPNRLRSLKTLPTKCSPVYTVQFSRRN 42
ADCTVKLWDVT+STK K +E K+G NRLRSLKTLPTK +PVY+++FSRRN
Sbjct: 599 GSLLASGSADCTVKLWDVTSSTKVTKAEESKSGSANRLRSLKTLPTKSTPVYSLRFSRRN 658
Query: 41 LLFAAGVLSRS 9
LLFAAGVLS+S
Sbjct: 659 LLFAAGVLSKS 669
>ref|XP_002309672.1| predicted protein [Populus trichocarpa] gi|222855648|gb|EEE93195.1|
predicted protein [Populus trichocarpa]
Length = 675
Score = 776 bits (2003), Expect = 0.0
Identities = 383/491 (78%), Positives = 423/491 (86%), Gaps = 6/491 (1%)
Frame = -2
Query: 1463 MLGIINEHINFQVSPGQPISISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLE 1284
+LGI+NEHINFQVSPGQPISISDD DAV L+GSSQD A QIN+KEI WGLL DS+E+RLE
Sbjct: 184 ILGIVNEHINFQVSPGQPISISDDPDAVTLIGSSQDAANQINKKEIHWGLLEDSLEERLE 243
Query: 1283 KASSLMFDSEKTEGEIKEGDVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNT 1104
K + DSEKTEGE KEGD+DENKKRS DGGKQG S+KK KKDK T K+VR E NT
Sbjct: 244 KTGGFLSDSEKTEGETKEGDMDENKKRSMDGGKQGASIKKSKKDKAASATAKAVRLEANT 303
Query: 1103 VSMAPRVKPELTLPVLPTEVEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS 924
V APRVKPEL LPV+P EVE SILEDLRNRVQL S LPSV FYTF+NTHNGLNCSSIS
Sbjct: 304 VPAAPRVKPELPLPVMPAEVEQSILEDLRNRVQLSSTTLPSVSFYTFINTHNGLNCSSIS 363
Query: 923 QDGSLVAGGFSDSSLKVWDMAKIGQ----ATVQGEN-GTPTEQLLGSENGRRSYTLLQGH 759
DGSLVAGGFSDSSLKVWDMAK+GQ + +QGEN P+E +LG +G+RSYTL QGH
Sbjct: 364 HDGSLVAGGFSDSSLKVWDMAKLGQQAGNSILQGENDAAPSEHVLGPNSGKRSYTLFQGH 423
Query: 758 AGPVYSSTFSPLGDFILSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFAS 579
+GPV+S+TFSPLGDFILSSS+D+T+RLWST+LNANLVCYKGHNYPVWDVQFSP+GHYFAS
Sbjct: 424 SGPVHSATFSPLGDFILSSSADTTVRLWSTELNANLVCYKGHNYPVWDVQFSPVGHYFAS 483
Query: 578 SSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECV 399
+SHDRTARIWSMDRIQPLRIMAGHLSDVDCV+WHANCNYIATGSSDKTVRLWDVQSGECV
Sbjct: 484 ASHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECV 543
Query: 398 RIFIGHRSMILSLAMSPDGRYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFXXX 219
RIFIGHRSMILSLAMSPDGRYMASGDE+G+IMMWDLSSGRCI+P+MGH SCVW+L F
Sbjct: 544 RIFIGHRSMILSLAMSPDGRYMASGDEDGSIMMWDLSSGRCISPMMGHHSCVWSLAFSCE 603
Query: 218 XXXXXXXXADCTVKLWDVTASTKAPKMDE-KAGCPNRLRSLKTLPTKCSPVYTVQFSRRN 42
ADCTVKLWDVT STK K +E K+G +RLR LKTLPTK +PV T++FSRRN
Sbjct: 604 SSLLASGSADCTVKLWDVTTSTKPAKTEESKSGNTHRLRFLKTLPTKSTPVSTLRFSRRN 663
Query: 41 LLFAAGVLSRS 9
LLFAAG LSRS
Sbjct: 664 LLFAAGALSRS 674
>ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
[Cucumis sativus] gi|449485181|ref|XP_004157092.1|
PREDICTED: transcription initiation factor TFIID subunit
5-like [Cucumis sativus]
Length = 674
Score = 773 bits (1996), Expect = 0.0
Identities = 376/492 (76%), Positives = 427/492 (86%), Gaps = 6/492 (1%)
Frame = -2
Query: 1463 MLGIINEHINFQVSPGQPISISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLE 1284
+LGIINE INFQV PGQP SISDDA+ V L GS+QDTA QIN+KE+ WGLL DS+E+RLE
Sbjct: 180 ILGIINERINFQVFPGQPSSISDDAELVTLTGSTQDTANQINKKEVHWGLLEDSLEERLE 239
Query: 1283 KASSLMFDSEKTEGEIKEGDVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNT 1104
KA+ L+ DSEK EGE K+GDVDENKKR+ +GGKQG S+KK+KKDK TGK++R+E N+
Sbjct: 240 KAAGLLSDSEKAEGETKDGDVDENKKRTAEGGKQGGSIKKVKKDKTASATGKTLRAEANS 299
Query: 1103 VSMAPRVKPELTLPVLPTEVEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS 924
SMAPRVKPEL LP++ TEVE SILEDLRNRVQL S ALPSV FYTF+NTHNGLNCSSIS
Sbjct: 300 ASMAPRVKPELALPIISTEVEESILEDLRNRVQLSSVALPSVSFYTFINTHNGLNCSSIS 359
Query: 923 QDGSLVAGGFSDSSLKVWDMAKIGQ----ATVQGENGTPT-EQLLGSENGRRSYTLLQGH 759
DG+LVAGGFSDSSLKVWDMAK+GQ +Q EN T + + G +G+R YTL QGH
Sbjct: 360 YDGALVAGGFSDSSLKVWDMAKLGQQAGNTVLQDENDMSTSDPVTGHTSGKRPYTLFQGH 419
Query: 758 AGPVYSSTFSPLGDFILSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFAS 579
+GPV+S+TFSP+GDF+LSSS+D+TIRLWSTKLNANLVCYKGHNYPVWDVQFSP+GHYFAS
Sbjct: 420 SGPVHSATFSPIGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFAS 479
Query: 578 SSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECV 399
SHDRTARIWSMDRIQPLRIMAGHLSDVDCV+WHANCNYIATGSSDKTVRLWDVQSGECV
Sbjct: 480 CSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECV 539
Query: 398 RIFIGHRSMILSLAMSPDGRYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFXXX 219
RIFIGHRSMILSLAMSPDGR+MASGDE+GTIMMWDLS+GRC+TPL+GHTSCVWTL F
Sbjct: 540 RIFIGHRSMILSLAMSPDGRFMASGDEDGTIMMWDLSTGRCVTPLIGHTSCVWTLAFSCE 599
Query: 218 XXXXXXXXADCTVKLWDVTASTKAPKMDE-KAGCPNRLRSLKTLPTKCSPVYTVQFSRRN 42
ADCTVKLWDVT+STK P+ DE K G PNRLRSLKTLPTK +PVY+++FSRRN
Sbjct: 600 GSLLASGSADCTVKLWDVTSSTKPPRTDENKTGTPNRLRSLKTLPTKSTPVYSLRFSRRN 659
Query: 41 LLFAAGVLSRSS 6
LLFAAG LS+++
Sbjct: 660 LLFAAGALSKNA 671