BLASTX nr result
ID: Coptis21_contig00009369
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009369
(1788 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271734.1| PREDICTED: LEC14B homolog [Vitis vinifera] 696 0.0
ref|XP_002872801.1| transducin family protein [Arabidopsis lyrat... 686 0.0
ref|NP_192211.2| transducin/WD40 domain-containing protein [Arab... 682 0.0
gb|AAC79104.1| putative WD-repeat protein [Arabidopsis thaliana]... 682 0.0
ref|XP_002320381.1| predicted protein [Populus trichocarpa] gi|2... 672 0.0
>ref|XP_002271734.1| PREDICTED: LEC14B homolog [Vitis vinifera]
Length = 486
Score = 696 bits (1796), Expect = 0.0
Identities = 347/486 (71%), Positives = 396/486 (81%), Gaps = 2/486 (0%)
Frame = +2
Query: 23 EMGFAMSRLGIXXXXXXXXXXXXXXXPASSINIMPNKRRVYIDNDIEQITKLGTKPDEHL 202
EMG+AMSRL + +N K ++D++I Q+TKL + P E L
Sbjct: 12 EMGYAMSRLELDSDFCDAGKDIHGNDNTERLN----KELNHLDHEISQLTKLRSGPHECL 67
Query: 203 KRVLPGERVTPSVSTVRMLAGREFNYSGKGRFSFADCRHVVSRYLPVYGPWEIDRFNTRA 382
+++PG+R +P VSTV+MLAGRE NYSG+GRFS ADC H++SRYLPV GPW +D+ +RA
Sbjct: 68 SQIIPGKRDSP-VSTVKMLAGREGNYSGRGRFSSADCCHMLSRYLPVNGPWLVDQMTSRA 126
Query: 383 YVSQFSADGSLLVAGSQGSHIKIYNVEKDWKVQKDILAKSLRWTVTDTSLSPDQRYLVYA 562
YVSQFSADGSL VAG QGSHI+IYNV++ WKVQK+ILAKSLRWTVTDTSLSPDQR+LVYA
Sbjct: 127 YVSQFSADGSLFVAGFQGSHIRIYNVDRGWKVQKNILAKSLRWTVTDTSLSPDQRHLVYA 186
Query: 563 SMSPFVHIVDIGSATKESHANVTEIHDGLDFSADGDGEYSFGIFSVKFSTDGRELVAGSS 742
SMSP VHIV+IGSA ES AN+TEIHDGLDFSA D YSFGIFSVKFSTDGRELVAGSS
Sbjct: 187 SMSPIVHIVNIGSAATESLANITEIHDGLDFSAADDEGYSFGIFSVKFSTDGRELVAGSS 246
Query: 743 DDSIYVYDLVSNKLTLRIAAHTSDVNTVCFADETGHLIYSGSDDNLCKVWDRRC-IGKGK 919
DDSIYVYDL +NKL+LRI AHTSDVNTVCFADE+GHLIYSGSDD+LCKVWDRRC I KGK
Sbjct: 247 DDSIYVYDLEANKLSLRILAHTSDVNTVCFADESGHLIYSGSDDSLCKVWDRRCFISKGK 306
Query: 920 PAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMPSNAXXXXXXXXGGMQFRN 1099
PAGVLMGHLEGITFIDSRGDGR+ ISN KDQ+IKLWDIRKM SNA FRN
Sbjct: 307 PAGVLMGHLEGITFIDSRGDGRHLISNSKDQSIKLWDIRKMSSNATCTPG-------FRN 359
Query: 1100 YEWDYRWMDYPPRARNMKHPCDQSLSTYRGHSVLRTLIRCYFSPAYSTGQKYIYTGSNDG 1279
YEWDYRWMDYP +AR +KHPCDQSLSTY+GHSVLRTLIRCYFSP+YSTGQKYIY+GS+D
Sbjct: 360 YEWDYRWMDYPTQARELKHPCDQSLSTYKGHSVLRTLIRCYFSPSYSTGQKYIYSGSSDS 419
Query: 1280 CVYIYDLVSGNQVARLDHHSQTVRDCSWHPFNPMLVSCSWDGVIARGEFPGTGE-KVRRK 1456
C+YIYDL++G QVA L+HH VRDC+WHP P+LVS SWDG I + EFPG GE + +K
Sbjct: 420 CIYIYDLLTGAQVATLEHHKSVVRDCNWHPNYPILVSSSWDGDIVKWEFPGNGEPPLIKK 479
Query: 1457 RIRRKY 1474
RIRRKY
Sbjct: 480 RIRRKY 485
>ref|XP_002872801.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297318638|gb|EFH49060.1| transducin family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 493
Score = 686 bits (1770), Expect = 0.0
Identities = 340/492 (69%), Positives = 395/492 (80%), Gaps = 3/492 (0%)
Frame = +2
Query: 8 EEDNYEMGFAMSRLGIXXXXXXXXXXXXXXXPASSINIMPNKRRVYIDNDIEQITKLGTK 187
E D EMG+AMSRL I +SS + ++ +D++I Q+TKL +
Sbjct: 7 EIDTDEMGYAMSRLEIESDLCDTGKDFCGVG-SSSASHRSSEHLADLDHEISQVTKLKSS 65
Query: 188 PDEHLKRVLPGERVTPSVSTVRMLAGREFNYSGKGRFSFADCRHVVSRYLPVYGPWEIDR 367
P + R +PG P VSTVRMLAGRE N+SG+GRFS ADC H++SRYLP+ GPW +D+
Sbjct: 66 PHQRYSREVPGRHQLP-VSTVRMLAGRESNFSGRGRFSAADCCHMLSRYLPIKGPWLVDQ 124
Query: 368 FNTRAYVSQFSADGSLLVAGSQGSHIKIYNVEKDWKVQKDILAKSLRWTVTDTSLSPDQR 547
++RAYVSQFS DGSL +AG QGS I+IYNVEK WKVQKDILAKSLRWTVTDTSLSPDQR
Sbjct: 125 MDSRAYVSQFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLSPDQR 184
Query: 548 YLVYASMSPFVHIVDIGSATKESHANVTEIHDGLDFSADGDGEYSFGIFSVKFSTDGREL 727
LVYASMSP VHIVD+GS T ESHANVTEIHDGLDFS+D DG YSFGIFSVKFSTDGR++
Sbjct: 185 NLVYASMSPIVHIVDVGSGTTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTDGRDI 244
Query: 728 VAGSSDDSIYVYDLVSNKLTLRIAAHTSDVNTVCFADETGHLIYSGSDDNLCKVWDRRC- 904
VAGSSDDSIYVYDL +N+++LR AHTSDVNTVCFADE+G+LI SGSDDNLCKVWDRRC
Sbjct: 245 VAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCF 304
Query: 905 IGKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMPSNAXXXXXXXXGG 1084
IG+ KPAGVL+GHLEG+TFIDSRGDGRYFISNGKDQTIKLWDIRKM S+A
Sbjct: 305 IGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAPARHEV---- 360
Query: 1085 MQFRNYEWDYRWMDYPPRARNMKHPCDQSLSTYRGHSVLRTLIRCYFSPAYSTGQKYIYT 1264
RNYEWDYRWMDYP AR++KHP DQS+STY+GHSVLRTLIRCYFSPA+STGQKYIYT
Sbjct: 361 --LRNYEWDYRWMDYPTEARDLKHPLDQSVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYT 418
Query: 1265 GSNDGCVYIYDLVSGNQVARLDHHSQTVRDCSWHPFNPMLVSCSWDGVIARGEFPGTGEK 1444
GSND VYIYDLVSG++VA L HHS VRDC+WHP+ P L+S SWDG + + EFPG+GE
Sbjct: 419 GSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWEFPGSGEA 478
Query: 1445 --VRRKRIRRKY 1474
+ +KR+RR++
Sbjct: 479 PIMSKKRVRRRH 490
>ref|NP_192211.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|334186335|ref|NP_001190666.1| transducin/WD40
domain-containing protein [Arabidopsis thaliana]
gi|20466538|gb|AAM20586.1| putative WD-repeat protein
[Arabidopsis thaliana] gi|23198298|gb|AAN15676.1|
putative WD-repeat protein [Arabidopsis thaliana]
gi|332656861|gb|AEE82261.1| transducin/WD40
domain-containing protein [Arabidopsis thaliana]
gi|332656862|gb|AEE82262.1| transducin/WD40
domain-containing protein [Arabidopsis thaliana]
Length = 493
Score = 682 bits (1760), Expect = 0.0
Identities = 339/492 (68%), Positives = 393/492 (79%), Gaps = 3/492 (0%)
Frame = +2
Query: 8 EEDNYEMGFAMSRLGIXXXXXXXXXXXXXXXPASSINIMPNKRRVYIDNDIEQITKLGTK 187
E D EMG+AMSRL I +S + ++ +D++I Q+TKL +
Sbjct: 7 EFDADEMGYAMSRLEIESDLCDTGKDVCGVGSSSGSH-RSSEHLADLDHEISQVTKLKSS 65
Query: 188 PDEHLKRVLPGERVTPSVSTVRMLAGREFNYSGKGRFSFADCRHVVSRYLPVYGPWEIDR 367
P + R +PG P VSTVRMLAGRE N+SG+GRFS ADC H++SRYLP GPW +D+
Sbjct: 66 PHQRYSREVPGRHQLP-VSTVRMLAGRESNFSGRGRFSAADCCHMLSRYLPTKGPWLVDQ 124
Query: 368 FNTRAYVSQFSADGSLLVAGSQGSHIKIYNVEKDWKVQKDILAKSLRWTVTDTSLSPDQR 547
++RAYVSQFS DGSL +AG QGS I+IYNVEK WKVQKDILAKSLRWTVTDTSLSPDQR
Sbjct: 125 MDSRAYVSQFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLSPDQR 184
Query: 548 YLVYASMSPFVHIVDIGSATKESHANVTEIHDGLDFSADGDGEYSFGIFSVKFSTDGREL 727
LVYASMSP VHIVD+GS + ESHANVTEIHDGLDFS+D DG YSFGIFSVKFSTDGRE+
Sbjct: 185 NLVYASMSPIVHIVDVGSGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTDGREV 244
Query: 728 VAGSSDDSIYVYDLVSNKLTLRIAAHTSDVNTVCFADETGHLIYSGSDDNLCKVWDRRC- 904
VAGSSDDSIYVYDL +N+++LR AHTSDVNTVCFADE+G+LI SGSDDNLCKVWDRRC
Sbjct: 245 VAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCF 304
Query: 905 IGKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMPSNAXXXXXXXXGG 1084
IG+ KPAGVL+GHLEG+TFIDSRGDGRYFISNGKDQTIKLWDIRKM S+A
Sbjct: 305 IGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAPARHEV---- 360
Query: 1085 MQFRNYEWDYRWMDYPPRARNMKHPCDQSLSTYRGHSVLRTLIRCYFSPAYSTGQKYIYT 1264
RNYEWDYRWMDYP AR++KHP DQS+STY+GHSVLRTLIRCYFSPA+STGQKYIYT
Sbjct: 361 --LRNYEWDYRWMDYPTEARDLKHPLDQSVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYT 418
Query: 1265 GSNDGCVYIYDLVSGNQVARLDHHSQTVRDCSWHPFNPMLVSCSWDGVIARGEFPGTGEK 1444
GSND VYIYDLVSG++VA L HHS VRDC+WHP+ P L+S SWDG + + EFPG+GE
Sbjct: 419 GSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWEFPGSGEA 478
Query: 1445 --VRRKRIRRKY 1474
+ +KR+RR++
Sbjct: 479 PIMSKKRVRRRH 490
>gb|AAC79104.1| putative WD-repeat protein [Arabidopsis thaliana]
gi|7269787|emb|CAB77787.1| putative WD-repeat protein
[Arabidopsis thaliana]
Length = 555
Score = 682 bits (1760), Expect = 0.0
Identities = 339/492 (68%), Positives = 393/492 (79%), Gaps = 3/492 (0%)
Frame = +2
Query: 8 EEDNYEMGFAMSRLGIXXXXXXXXXXXXXXXPASSINIMPNKRRVYIDNDIEQITKLGTK 187
E D EMG+AMSRL I +S + ++ +D++I Q+TKL +
Sbjct: 69 EFDADEMGYAMSRLEIESDLCDTGKDVCGVGSSSGSH-RSSEHLADLDHEISQVTKLKSS 127
Query: 188 PDEHLKRVLPGERVTPSVSTVRMLAGREFNYSGKGRFSFADCRHVVSRYLPVYGPWEIDR 367
P + R +PG P VSTVRMLAGRE N+SG+GRFS ADC H++SRYLP GPW +D+
Sbjct: 128 PHQRYSREVPGRHQLP-VSTVRMLAGRESNFSGRGRFSAADCCHMLSRYLPTKGPWLVDQ 186
Query: 368 FNTRAYVSQFSADGSLLVAGSQGSHIKIYNVEKDWKVQKDILAKSLRWTVTDTSLSPDQR 547
++RAYVSQFS DGSL +AG QGS I+IYNVEK WKVQKDILAKSLRWTVTDTSLSPDQR
Sbjct: 187 MDSRAYVSQFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLSPDQR 246
Query: 548 YLVYASMSPFVHIVDIGSATKESHANVTEIHDGLDFSADGDGEYSFGIFSVKFSTDGREL 727
LVYASMSP VHIVD+GS + ESHANVTEIHDGLDFS+D DG YSFGIFSVKFSTDGRE+
Sbjct: 247 NLVYASMSPIVHIVDVGSGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTDGREV 306
Query: 728 VAGSSDDSIYVYDLVSNKLTLRIAAHTSDVNTVCFADETGHLIYSGSDDNLCKVWDRRC- 904
VAGSSDDSIYVYDL +N+++LR AHTSDVNTVCFADE+G+LI SGSDDNLCKVWDRRC
Sbjct: 307 VAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCF 366
Query: 905 IGKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMPSNAXXXXXXXXGG 1084
IG+ KPAGVL+GHLEG+TFIDSRGDGRYFISNGKDQTIKLWDIRKM S+A
Sbjct: 367 IGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAPARHEV---- 422
Query: 1085 MQFRNYEWDYRWMDYPPRARNMKHPCDQSLSTYRGHSVLRTLIRCYFSPAYSTGQKYIYT 1264
RNYEWDYRWMDYP AR++KHP DQS+STY+GHSVLRTLIRCYFSPA+STGQKYIYT
Sbjct: 423 --LRNYEWDYRWMDYPTEARDLKHPLDQSVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYT 480
Query: 1265 GSNDGCVYIYDLVSGNQVARLDHHSQTVRDCSWHPFNPMLVSCSWDGVIARGEFPGTGEK 1444
GSND VYIYDLVSG++VA L HHS VRDC+WHP+ P L+S SWDG + + EFPG+GE
Sbjct: 481 GSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWEFPGSGEA 540
Query: 1445 --VRRKRIRRKY 1474
+ +KR+RR++
Sbjct: 541 PIMSKKRVRRRH 552
>ref|XP_002320381.1| predicted protein [Populus trichocarpa] gi|222861154|gb|EEE98696.1|
predicted protein [Populus trichocarpa]
Length = 488
Score = 672 bits (1734), Expect = 0.0
Identities = 341/487 (70%), Positives = 382/487 (78%), Gaps = 4/487 (0%)
Frame = +2
Query: 23 EMGFAMSRLGIXXXXXXXXXXXXXXXPASSINIMPNKRRVYIDNDIEQITKLGTKPDEHL 202
EMG+AMSRL + + N +D++I Q+TKL + P + L
Sbjct: 12 EMGYAMSRLETESELCDGGKTIPEAGSSKRASNWLNN----LDHEIAQVTKLKSSPHKQL 67
Query: 203 KRVLPGERVTPSVSTVRMLAGREFNYSGKGRFSFADCRHVVSRYLPVYGPWEIDRFNTRA 382
++PG + SVSTV+ML GRE NYS +GRFS AD H++SRYLPV GPW +D+ +TRA
Sbjct: 68 AELVPGMHKS-SVSTVKMLVGREANYSARGRFSAADRCHMLSRYLPVNGPWLVDQMSTRA 126
Query: 383 YVSQFSADGSLLVAGSQGSHIKIYNVEKDWKVQKDILAKSLRWTVTDTSLSPDQRYLVYA 562
YVSQFSADGSL VAG QGS+I+IYNVEK WKVQK+ILAKSLRWTVTDTSLSPDQR+LVYA
Sbjct: 127 YVSQFSADGSLFVAGFQGSYIRIYNVEKGWKVQKNILAKSLRWTVTDTSLSPDQRHLVYA 186
Query: 563 SMSPFVHIVDIGSATKESHANVTEIHDGLDFSADGDGEYSFGIFSVKFSTDGRELVAGSS 742
SMSP VHIVD GSA ES ANVTE HDGLDFS+ GDG YSFGIFSVKFSTDGRELVAGS+
Sbjct: 187 SMSPIVHIVDAGSAETESLANVTEFHDGLDFSS-GDGGYSFGIFSVKFSTDGRELVAGSN 245
Query: 743 DDSIYVYDLVSNKLTLRIAAHTSDVNTVCFADETGHLIYSGSDDNLCKVWDRRC-IGKGK 919
DDSIYVYDL NKL+LRI AHTSDVNTVCFADE+GHLI+SGSDDNLCKVWDRRC I KGK
Sbjct: 246 DDSIYVYDLEQNKLSLRILAHTSDVNTVCFADESGHLIFSGSDDNLCKVWDRRCFIAKGK 305
Query: 920 PAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMPSNAXXXXXXXXGGMQFRN 1099
PAGVL GHLEGITFIDS GDGRYFISNGKDQTIKLWDIRKM NA RN
Sbjct: 306 PAGVLTGHLEGITFIDSHGDGRYFISNGKDQTIKLWDIRKMAPNATSYSG-------LRN 358
Query: 1100 YEWDYRWMDYPPRARNMKHPCDQSLSTYRGHSVLRTLIRCYFSPAYSTGQKYIYTGSNDG 1279
YEWDYRWMDYP AR++KHPCDQS++TY+GHSVLRTLIRCYFSP YSTGQKYIYTGS+D
Sbjct: 359 YEWDYRWMDYPYEARDLKHPCDQSVATYKGHSVLRTLIRCYFSPVYSTGQKYIYTGSHDS 418
Query: 1280 CVYIYDLVSGNQVARLDHHSQTVRDCSWHPFNPMLVSCSWDGVIARGEFPGTGE---KVR 1450
CVYIYDLV+G V+ L HH VRDCSWHP+ PMLVS SWDG + + EFPG GE
Sbjct: 419 CVYIYDLVTGELVSLLQHHKSPVRDCSWHPYYPMLVSSSWDGDVVKWEFPGNGEAPVPST 478
Query: 1451 RKRIRRK 1471
+KRIRR+
Sbjct: 479 KKRIRRR 485