BLASTX nr result

ID: Coptis21_contig00009324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009324
         (2205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221...   101   1e-18
ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    99   6e-18
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]      96   4e-17
ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-16
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]              94   2e-16

>ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus]
          Length = 1544

 Score =  101 bits (251), Expect = 1e-18
 Identities = 49/137 (35%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
 Frame = +3

Query: 894  NDVKMDVD-----GKLDPDGFIDWVNKCDNFFEYKGFGDPKHVVLIETKLNGFALNWWNS 1058
            +D KM +D     GK + + F+DW+   +NFF Y    + K V L+  KL   A  WW+ 
Sbjct: 238  HDYKMKIDLPMYDGKRNIEAFLDWIKSTENFFNYMDTPERKKVHLVALKLRAGASAWWDQ 297

Query: 1059 IQNSRAM*GFRPIKEWLKMKRELRSEFLPPTYERDLSRRVQALKQGPLSIKEYTEEFNLL 1238
            ++ +R   G +P++ W KMK+ L++ FLPP YE+ L  + Q  +QG  ++ EY EEF+ L
Sbjct: 298  LEINRQRCGKQPVRSWEKMKKLLKARFLPPNYEQTLYNQYQNCRQGVRTVAEYIEEFHRL 357

Query: 1239 AFRASRTETEETKLGIF 1289
            + R + +E E+ ++  F
Sbjct: 358  SARTNLSENEQHQVARF 374


>ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101214124
            [Cucumis sativus]
          Length = 586

 Score = 98.6 bits (244), Expect = 6e-18
 Identities = 61/189 (32%), Positives = 89/189 (47%), Gaps = 24/189 (12%)
 Frame = +3

Query: 807  HNNRRFHGNYFVPNAVAPVNQGDDDLAALN-------------------DVKMDVD---- 917
            HNNR +  N  VP      +   D+   LN                   +++M VD    
Sbjct: 42   HNNRLYGNN--VPGHFLDDSDSSDEDNLLNIHQEPQQRLGLRPYFQEDQEIRMKVDLPTF 99

Query: 918  -GKLDPDGFIDWVNKCDNFFEYKGFGDPKHVVLIETKLNGFALNWWNSIQNSRAM*GFRP 1094
             G++D + F+DW+   + FF Y      K V L+  KL G    WW+ +QN+R + G + 
Sbjct: 100  NGRMDVEKFLDWIKNVEIFFNYANTPKHKKVRLVALKLQGGTSAWWDQLQNNRRLFGKQS 159

Query: 1095 IKEWLKMKRELRSEFLPPTYERDLSRRVQALKQGPLSIKEYTEEFNLLAFRASRTETEET 1274
            I+ W KM R ++  FLP  Y++ L  + Q   QG  SI +YTEEF  L  R +  ETE  
Sbjct: 160  IRSWPKMLRLMKKRFLPINYQQLLYNQYQQCHQGSRSIMDYTEEFYRLGARNNLLETEHQ 219

Query: 1275 KLGIFSHNL 1301
            ++  F H L
Sbjct: 220  QISRFIHGL 228


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score = 95.9 bits (237), Expect = 4e-17
 Identities = 46/131 (35%), Positives = 70/131 (53%)
 Frame = +3

Query: 915  DGKLDPDGFIDWVNKCDNFFEYKGFGDPKHVVLIETKLNGFALNWWNSIQNSRAM*GFRP 1094
            +G  DP+ ++ W  K D  F    + + K V +   + +G+AL WW  + N R   G   
Sbjct: 148  EGGSDPEVYLTWELKVDKIFRLHNYSERKKVAMAALEFDGYALIWWEQMLNEREEAGQGD 207

Query: 1095 IKEWLKMKRELRSEFLPPTYERDLSRRVQALKQGPLSIKEYTEEFNLLAFRASRTETEET 1274
            ++ W +MKRE+R+ F+P  Y RDL  ++Q LKQG LS+ EY +E      RA+  E EE 
Sbjct: 208  VRSWAEMKREMRARFVPKHYRRDLFDKLQNLKQGSLSVDEYYKEMEKAMIRANVYEDEEQ 267

Query: 1275 KLGIFSHNLFK 1307
             +  F   L +
Sbjct: 268  SIARFMSGLHR 278


>ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 46/119 (38%), Positives = 69/119 (57%)
 Frame = +3

Query: 924  LDPDGFIDWVNKCDNFFEYKGFGDPKHVVLIETKLNGFALNWWNSIQNSRAM*GFRPIKE 1103
            L  D ++DW+N  D   E+K   + + V L+ T+L G A  WW  ++ +R + G   I  
Sbjct: 98   LQADEYLDWINTVDEVLEFKQVPEDRRVALVATRLRGRAGAWWQQVKKTRTLQGKGKITC 157

Query: 1104 WLKMKRELRSEFLPPTYERDLSRRVQALKQGPLSIKEYTEEFNLLAFRASRTETEETKL 1280
            W KMK+ +RS FLP  Y R L +R+Q L+QG  S+ +YT EF  L  R +  E EE+++
Sbjct: 158  WDKMKKNMRSAFLPYNYTRTLYQRLQNLRQGNRSVDDYTTEFYQLVSRDAIAEDEESRV 216


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score = 94.0 bits (232), Expect = 2e-16
 Identities = 46/145 (31%), Positives = 74/145 (51%)
 Frame = +3

Query: 867  QGDDDLAALNDVKMDVDGKLDPDGFIDWVNKCDNFFEYKGFGDPKHVVLIETKLNGFALN 1046
            QG D+L  +        GK DP+ +++W  K +  F    + + + V +   +   +AL 
Sbjct: 64   QGGDNLRGIKIKVPTFVGKSDPEAYLEWETKLEQIFNCHNYSNLEKVQVASIEFKEYALV 123

Query: 1047 WWNSIQNSRAM*GFRPIKEWLKMKRELRSEFLPPTYERDLSRRVQALKQGPLSIKEYTEE 1226
            WW+ +   R     RPI  W +MKR +R  F+P  Y R+L  ++Q L QG  S++EY +E
Sbjct: 124  WWDQLTKDRRRYAERPIDTWEEMKRIMRRRFVPSYYHRELHNKLQRLTQGSKSVEEYFKE 183

Query: 1227 FNLLAFRASRTETEETKLGIFSHNL 1301
              +L  RA+  E +E  +  F H L
Sbjct: 184  MEVLKIRANVEEDDEATMARFLHGL 208


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