BLASTX nr result
ID: Coptis21_contig00009314
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00009314 (536 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280767.1| PREDICTED: uncharacterized protein LOC100252... 85 8e-15 emb|CBI27867.3| unnamed protein product [Vitis vinifera] 85 8e-15 gb|ABD66518.1| RNA-binding protein [Gymnadenia conopsea] 72 5e-11 ref|XP_002514090.1| Cell growth-regulating nucleolar protein, pu... 70 2e-10 ref|XP_004141064.1| PREDICTED: uncharacterized protein LOC101207... 70 2e-10 >ref|XP_002280767.1| PREDICTED: uncharacterized protein LOC100252615 [Vitis vinifera] Length = 325 Score = 84.7 bits (208), Expect = 8e-15 Identities = 44/65 (67%), Positives = 52/65 (80%) Frame = +1 Query: 1 LISSFLRSNPDGALKMRKLQKLVLMSLQESGHNDDEDQLKEKLMEKINSSSKFVVDDKRV 180 LI+S L+SNPDG LKMRKL+KLV+ +L+ESG DDE QL EKL KINSSS+F VD+K V Sbjct: 260 LITSALKSNPDGVLKMRKLRKLVIKALEESGITDDETQLSEKLEHKINSSSRFTVDNKYV 319 Query: 181 CLAVK 195 LA K Sbjct: 320 RLAAK 324 >emb|CBI27867.3| unnamed protein product [Vitis vinifera] Length = 280 Score = 84.7 bits (208), Expect = 8e-15 Identities = 44/65 (67%), Positives = 52/65 (80%) Frame = +1 Query: 1 LISSFLRSNPDGALKMRKLQKLVLMSLQESGHNDDEDQLKEKLMEKINSSSKFVVDDKRV 180 LI+S L+SNPDG LKMRKL+KLV+ +L+ESG DDE QL EKL KINSSS+F VD+K V Sbjct: 215 LITSALKSNPDGVLKMRKLRKLVIKALEESGITDDETQLSEKLEHKINSSSRFTVDNKYV 274 Query: 181 CLAVK 195 LA K Sbjct: 275 RLAAK 279 >gb|ABD66518.1| RNA-binding protein [Gymnadenia conopsea] Length = 313 Score = 72.0 bits (175), Expect = 5e-11 Identities = 36/65 (55%), Positives = 50/65 (76%) Frame = +1 Query: 1 LISSFLRSNPDGALKMRKLQKLVLMSLQESGHNDDEDQLKEKLMEKINSSSKFVVDDKRV 180 LI S L+S P+GA+K++KL+KLV+ L+ SG + DE QL + +MEKINSSSKFV+D K + Sbjct: 245 LIISALKSKPEGAMKIKKLKKLVINELKMSGIDGDEMQLCDAMMEKINSSSKFVIDSKHI 304 Query: 181 CLAVK 195 L +K Sbjct: 305 SLVLK 309 >ref|XP_002514090.1| Cell growth-regulating nucleolar protein, putative [Ricinus communis] gi|223546546|gb|EEF48044.1| Cell growth-regulating nucleolar protein, putative [Ricinus communis] Length = 312 Score = 70.5 bits (171), Expect = 2e-10 Identities = 36/65 (55%), Positives = 49/65 (75%) Frame = +1 Query: 1 LISSFLRSNPDGALKMRKLQKLVLMSLQESGHNDDEDQLKEKLMEKINSSSKFVVDDKRV 180 LI S LR+NPDG LKM+KL+KLV SL+ESG +DE ++ + L +KIN+SS+F D+K V Sbjct: 247 LIKSALRTNPDGVLKMKKLKKLVFKSLRESGIIEDETRVNDMLEQKINTSSRFKADNKYV 306 Query: 181 CLAVK 195 LA + Sbjct: 307 RLAAR 311 >ref|XP_004141064.1| PREDICTED: uncharacterized protein LOC101207334 [Cucumis sativus] gi|449488063|ref|XP_004157930.1| PREDICTED: uncharacterized protein LOC101225976 [Cucumis sativus] Length = 316 Score = 70.1 bits (170), Expect = 2e-10 Identities = 37/66 (56%), Positives = 48/66 (72%) Frame = +1 Query: 1 LISSFLRSNPDGALKMRKLQKLVLMSLQESGHNDDEDQLKEKLMEKINSSSKFVVDDKRV 180 LI+S L+SNPDG LK+ KL+KL L S++ESG +DE +L L +KINSSSKF V+ K V Sbjct: 251 LITSILKSNPDGVLKLSKLRKLTLKSIRESGVTEDETKLIGMLDQKINSSSKFAVEKKYV 310 Query: 181 CLAVKS 198 L K+ Sbjct: 311 RLTAKA 316