BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009298
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22283.3| unnamed protein product [Vitis vinifera]              191   5e-47
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi...   191   5e-47
ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44
ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44

>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  191 bits (485), Expect = 5e-47
 Identities = 89/130 (68%), Positives = 110/130 (84%)
 Frame = -1

Query: 437 MEASGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKKCTPDTFTYLSLIRACVWGSL 258
           MEASGL VS  SYNLV+ ACE ARKP++ALQVYE MV ++CTPDTFT+LSLIR+C+WGSL
Sbjct: 489 MEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPDTFTHLSLIRSCIWGSL 548

Query: 257 WSELQEILNHVPADVSLYNAAIHGMCLRGQTASAQKMYKKMREGGLKPDGKTRALMIQNL 78
           W+E++EILN    DVSLYNAAI GMCLRG+  SA+K+Y +MR+ GLKPDGKTRALM+QNL
Sbjct: 549 WAEVKEILNRAGTDVSLYNAAIQGMCLRGKIESAKKLYMRMRKSGLKPDGKTRALMLQNL 608

Query: 77  KSNSSRQKSR 48
           + ++ R  +R
Sbjct: 609 QKDAIRPSNR 618


>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Vitis vinifera]
          Length = 546

 Score =  191 bits (485), Expect = 5e-47
 Identities = 89/130 (68%), Positives = 110/130 (84%)
 Frame = -1

Query: 437 MEASGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKKCTPDTFTYLSLIRACVWGSL 258
           MEASGL VS  SYNLV+ ACE ARKP++ALQVYE MV ++CTPDTFT+LSLIR+C+WGSL
Sbjct: 409 MEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPDTFTHLSLIRSCIWGSL 468

Query: 257 WSELQEILNHVPADVSLYNAAIHGMCLRGQTASAQKMYKKMREGGLKPDGKTRALMIQNL 78
           W+E++EILN    DVSLYNAAI GMCLRG+  SA+K+Y +MR+ GLKPDGKTRALM+QNL
Sbjct: 469 WAEVKEILNRAGTDVSLYNAAIQGMCLRGKIESAKKLYMRMRKSGLKPDGKTRALMLQNL 528

Query: 77  KSNSSRQKSR 48
           + ++ R  +R
Sbjct: 529 QKDAIRPSNR 538


>ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|222866890|gb|EEF04021.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/134 (66%), Positives = 109/134 (81%)
 Frame = -1

Query: 434 EASGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKKCTPDTFTYLSLIRACVWGSLW 255
           EASGL VS  SYNL + ACE ARKP+VAL+VYE MVH+KC PDTFTYLSLIR+C+W SLW
Sbjct: 357 EASGLSVSTASYNLAIGACEVARKPEVALEVYEHMVHQKCPPDTFTYLSLIRSCIWASLW 416

Query: 254 SELQEILNHVPADVSLYNAAIHGMCLRGQTASAQKMYKKMREGGLKPDGKTRALMIQNLK 75
            E++EIL+ V  DVSLYNA IHGMCLRG+T SA+K+Y KM + GLKPDG   ALM+QNL+
Sbjct: 417 DEVEEILDQVAPDVSLYNAVIHGMCLRGKTESAKKLYMKMGKSGLKPDG---ALMLQNLR 473

Query: 74  SNSSRQKSRYPSRR 33
            NS++ +SR+ + R
Sbjct: 474 KNSTK-RSRFSTCR 486


>ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Cucumis sativus]
          Length = 600

 Score =  183 bits (464), Expect = 1e-44
 Identities = 83/133 (62%), Positives = 109/133 (81%)
 Frame = -1

Query: 437 MEASGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKKCTPDTFTYLSLIRACVWGSL 258
           ME SGL +S  SYN+V++ACE ARKP++ALQVYE+MVH+K TPDTFT+LSLIR C+WGSL
Sbjct: 456 MEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKLTPDTFTHLSLIRCCIWGSL 515

Query: 257 WSELQEILNHVPADVSLYNAAIHGMCLRGQTASAQKMYKKMREGGLKPDGKTRALMIQNL 78
           W E++ +LN    DVS+YN  I GMCLRG++  A+K+Y KMRE G++PDGKTRALM+QNL
Sbjct: 516 WDEVELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTRALMLQNL 575

Query: 77  KSNSSRQKSRYPS 39
             + +R+K+R+ S
Sbjct: 576 PKDPARRKNRWAS 588


>ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Cucumis sativus]
          Length = 600

 Score =  182 bits (462), Expect = 2e-44
 Identities = 83/133 (62%), Positives = 109/133 (81%)
 Frame = -1

Query: 437 MEASGLPVSVESYNLVVSACEAARKPKVALQVYEQMVHKKCTPDTFTYLSLIRACVWGSL 258
           ME SGL +S  SYN+V++ACE ARKP++ALQVYE+MVH+K TPDTFT+LSLIR C+WGSL
Sbjct: 456 MEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKHTPDTFTHLSLIRCCIWGSL 515

Query: 257 WSELQEILNHVPADVSLYNAAIHGMCLRGQTASAQKMYKKMREGGLKPDGKTRALMIQNL 78
           W E++ +LN    DVS+YN  I GMCLRG++  A+K+Y KMRE G++PDGKTRALM+QNL
Sbjct: 516 WDEVELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTRALMLQNL 575

Query: 77  KSNSSRQKSRYPS 39
             + +R+K+R+ S
Sbjct: 576 PKDPARRKNRWAS 588