BLASTX nr result

ID: Coptis21_contig00009297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009297
         (1208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268866.1| PREDICTED: uncharacterized protein LOC100253...   276   1e-71
ref|XP_003518474.1| PREDICTED: dr1-associated corepressor-like [...   267   5e-69
emb|CAN71308.1| hypothetical protein VITISV_014287 [Vitis vinifera]   254   4e-65
ref|XP_002314232.1| predicted protein [Populus trichocarpa] gi|2...   252   1e-64
ref|XP_003545173.1| PREDICTED: dr1-associated corepressor-like [...   252   2e-64

>ref|XP_002268866.1| PREDICTED: uncharacterized protein LOC100253016 [Vitis vinifera]
           gi|296083929|emb|CBI24317.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  276 bits (705), Expect = 1e-71
 Identities = 152/289 (52%), Positives = 185/289 (64%), Gaps = 27/289 (9%)
 Frame = +2

Query: 68  MRKKLDTRFPASRIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCERTYDITLQRGAK 247
           MRKKLDTRFPASRIKKIMQADEDVGKIA+AVPLLVSKALELFLQDLC+RTY ITL+RGAK
Sbjct: 1   MRKKLDTRFPASRIKKIMQADEDVGKIALAVPLLVSKALELFLQDLCDRTYQITLERGAK 60

Query: 248 TVSSFHLKQCVQSYNVFDFLKEVVSKVPDLGGSEAAAEDRALTKRRKAIEEEDNETDDEA 427
           T+SS HLKQCVQ +NVFDFL+E+VSKVPDLG S+A  EDR+ +KRRK +++E N++D+E+
Sbjct: 61  TMSSLHLKQCVQRFNVFDFLREIVSKVPDLGCSDAGGEDRSASKRRKVVDDEGNDSDEES 120

Query: 428 KRSRMHDTGNNSSS-----------XXXXXXXXXXXXXXPSQSATQFAKCEDDPDMSPQH 574
           KRSRMH+TG+   S                            +  +  K EDD DM   +
Sbjct: 121 KRSRMHETGHTVGSGSGSGSGRGRGRGRGRGRGRGSRTIERDTIAESEKPEDDTDMHTNN 180

Query: 575 DKLNVNPIGLENGTEAK-----------EFKESMLAGSSTNPALRNFDLNVDLHVNG--- 712
           D  + NP   +NG E +           E KE++  G + +  +RNFDLNVDL  NG   
Sbjct: 181 DNQSQNPETRDNGAEPEESKENISVVKNESKENISVGKNADSCVRNFDLNVDLDENGDST 240

Query: 713 --XXXXXXXXXXXXXXXXXELKHEEYPGWSHLDMEKGPIDPLQLVHLNR 853
                              E+KHEEYPGWS  DMEK  IDP+QL +LNR
Sbjct: 241 SILPAAPAPAPVTPSPKLTEMKHEEYPGWSLSDMEKMEIDPIQLANLNR 289


>ref|XP_003518474.1| PREDICTED: dr1-associated corepressor-like [Glycine max]
          Length = 279

 Score =  267 bits (682), Expect = 5e-69
 Identities = 142/265 (53%), Positives = 181/265 (68%), Gaps = 4/265 (1%)
 Frame = +2

Query: 68  MRKKLDTRFPASRIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCERTYDITLQRGAK 247
           MRKKLDTRFPA+RIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLC+RTYDITL+RGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYDITLRRGAK 60

Query: 248 TVSSFHLKQCVQSYNVFDFLKEVVSKVPDLGGSEAAAEDRALTKRRKAIEEEDNETDDEA 427
           T+++FHLKQCVQ++NVFDFLK++VSKVPDLGGS A  +D A+TKRRK   ++DN++D+E 
Sbjct: 61  TMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGGSVATGDDHAVTKRRKVAGDDDNDSDEEL 120

Query: 428 KRSRMHDTGNNSSSXXXXXXXXXXXXXXPS--QSATQFAKCEDDPDMSPQHDKLNVNPIG 601
           KR++  + G++S                 +  Q  +  AKCEDD D+  Q+D    +   
Sbjct: 121 KRNKKPEPGHSSGRGRGRGRGRGLGGGIRTVDQEMSSHAKCEDDSDVLKQNDNHTQSNES 180

Query: 602 LENGTEAKEFKESMLAGSSTNPALRNFDLNV--DLHVNGXXXXXXXXXXXXXXXXXELKH 775
           +EN  E +E K+S         ++RNFDLN+  D +++                  E KH
Sbjct: 181 MENVLEPEEVKQSFPVSELAEVSVRNFDLNLDPDENMDSLDTPTSVPTSSSAKSVSEEKH 240

Query: 776 EEYPGWSHLDMEKGPIDPLQLVHLN 850
           EEYPGWS  +MEK  IDP+QL +LN
Sbjct: 241 EEYPGWSLSEMEKMIIDPIQLANLN 265


>emb|CAN71308.1| hypothetical protein VITISV_014287 [Vitis vinifera]
          Length = 313

 Score =  254 bits (648), Expect = 4e-65
 Identities = 141/278 (50%), Positives = 174/278 (62%), Gaps = 27/278 (9%)
 Frame = +2

Query: 101 SRIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCERTYDITLQRGAKTVSSFHLKQCV 280
           SRIKKIMQADEDVGKIA+AVPLLVSKALELFLQDLC+RTY ITL+RGAKT+SS HLKQCV
Sbjct: 24  SRIKKIMQADEDVGKIALAVPLLVSKALELFLQDLCDRTYQITLERGAKTMSSLHLKQCV 83

Query: 281 QSYNVFDFLKEVVSKVPDLGGSEAAAEDRALTKRRKAIEEEDNETDDEAKRSRMHDTGNN 460
           Q +NVFDFL+E+VSKVPDLG S+A  EDR+ +KRRK +++E N++D+E+KRSRMH+TG+ 
Sbjct: 84  QRFNVFDFLREIVSKVPDLGCSDAGGEDRSASKRRKVVDDEGNDSDEESKRSRMHETGHT 143

Query: 461 SSS-----------XXXXXXXXXXXXXXPSQSATQFAKCEDDPDMSPQHDKLNVNPIGLE 607
             S                            +  +  K EDD DM   +D  + NP   +
Sbjct: 144 VGSGSGSGSGRGRGRGRGRGRGRGSRTIERDTIAESEKPEDDTDMHTNNDNQSQNPETRD 203

Query: 608 NGTEAK-----------EFKESMLAGSSTNPALRNFDLNVDLHVNG-----XXXXXXXXX 739
           NG E +           E KE++  G + +  +RNFDLNVDL  NG              
Sbjct: 204 NGAEPEESKENISVVKNESKENISVGKNADSCVRNFDLNVDLDENGDSTSILPAAPAPAP 263

Query: 740 XXXXXXXXELKHEEYPGWSHLDMEKGPIDPLQLVHLNR 853
                   E+KHEEYPGWS  DMEK  IDP+QL +LNR
Sbjct: 264 VTPSPKLTEMKHEEYPGWSLSDMEKMEIDPIQLANLNR 301


>ref|XP_002314232.1| predicted protein [Populus trichocarpa] gi|222850640|gb|EEE88187.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  252 bits (644), Expect = 1e-64
 Identities = 140/287 (48%), Positives = 178/287 (62%), Gaps = 26/287 (9%)
 Frame = +2

Query: 68  MRKKLDTRFPASRIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCERTYDITLQRGAK 247
           MRKKLDTRFPA+RIKKIMQ DEDVGKIAMAVPLLVSKALELFLQDLC+RTY+ITL+RGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQTDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60

Query: 248 TVSSFHLKQCVQSYNVFDFLKEVVSKVPDLGGSEAAAEDRALTKRRKAIEEEDNETDDEA 427
           T++S HLKQCVQ++NVFDFL+E+VSKVPDLGG +AA ++  + KRRK  ++EDN++D+E 
Sbjct: 61  TLNSLHLKQCVQTFNVFDFLREIVSKVPDLGGPDAAFDEHGIGKRRKVADDEDNDSDEEC 120

Query: 428 KRSRMHDTGNNSSSXXXXXXXXXXXXXXPSQSATQFAKCEDDPDMSPQHDKLNVNPIGLE 607
            RSR H+T   SSS                + A Q  K ED+PD+   +DK + N   L+
Sbjct: 121 NRSRTHETTQTSSS-GRGRGRGRGTRAMERERAAQDGKLEDEPDIVHHNDKHSPNLGRLD 179

Query: 608 NGTEAKEFKESMLAGSSTNPALRNFDLNVDLHVNG------------------------- 712
                ++ K+++ AG +    + +FDLN+DL  NG                         
Sbjct: 180 KDYVPEDLKDNIPAGRNLRTPVHDFDLNLDLDENGETKTVLASVPASSSTKPDTVVPASS 239

Query: 713 -XXXXXXXXXXXXXXXXXELKHEEYPGWSHLDMEKGPIDPLQLVHLN 850
                             ELKHEE PGWS  D+E   IDP+QL +LN
Sbjct: 240 STKPDTVVPASSSTKPIPELKHEEVPGWSLADIEGMDIDPIQLANLN 286


>ref|XP_003545173.1| PREDICTED: dr1-associated corepressor-like [Glycine max]
          Length = 286

 Score =  252 bits (643), Expect = 2e-64
 Identities = 141/275 (51%), Positives = 175/275 (63%), Gaps = 14/275 (5%)
 Frame = +2

Query: 68  MRKKLDTRFPASRIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCERTYDITLQRGAK 247
           MRKKLDTRFPA+RIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLC++TY+ITL+RGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDQTYEITLRRGAK 60

Query: 248 TVSSFHLKQCVQSYNVFDFLKEVVSKVPDLGGSEAAAEDRALTKRRKAIEEEDNETDDEA 427
           T+++FHLKQCVQ++NVFDFLK++VSKVPDLG S A  +D A+TKRRK   ++DN++D+E 
Sbjct: 61  TMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGSSVATGDDHAVTKRRKVAGDDDNDSDEEL 120

Query: 428 KR------------SRMHDTGNNSSSXXXXXXXXXXXXXXPSQSATQFAKCEDDPDMSPQ 571
           KR            S + + G+  SS                Q     AKCEDD  +  Q
Sbjct: 121 KRNKKVIYQLYSITSSVPEPGH--SSGRGRGRGRGRGIRTVDQEMGSHAKCEDDSHVLKQ 178

Query: 572 HDKLNVNPIGLENGTEAKEFKESMLAGSSTNPALRNFDLNV--DLHVNGXXXXXXXXXXX 745
           +D    N   +EN +E  E K+S      T   +RNFDLN+  D  ++            
Sbjct: 179 NDNHQSNE-SMENASEPAEVKQSFPVSKPTEVCIRNFDLNLDPDEDMDSLDTPTSVPASS 237

Query: 746 XXXXXXELKHEEYPGWSHLDMEKGPIDPLQLVHLN 850
                 E KHEEYPGW   DMEK  IDP+QL ++N
Sbjct: 238 SAKSVSEEKHEEYPGWPLSDMEKMTIDPIQLANIN 272


Top