BLASTX nr result

ID: Coptis21_contig00009294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009294
         (1497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17313.3| unnamed protein product [Vitis vinifera]              333   7e-89
ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-...   333   7e-89
emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]   333   7e-89
ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-...   316   9e-84
ref|XP_002518095.1| transcription factor, putative [Ricinus comm...   314   3e-83

>emb|CBI17313.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  333 bits (854), Expect = 7e-89
 Identities = 187/382 (48%), Positives = 231/382 (60%), Gaps = 20/382 (5%)
 Frame = +1

Query: 115  VVRERRWKEITSVFKFPSTATNASFILRKYYVSLIHHYEQLYYFGAKGWTRSEPDPLLNS 294
            ++RERRWKE+T+VF FPSTATNASF+LRKYYVSL+HHYEQ+Y+F A+GW     D   + 
Sbjct: 106  IIRERRWKEVTAVFSFPSTATNASFVLRKYYVSLLHHYEQIYFFKAQGWAPISADASQSP 165

Query: 295  PPTPIPVQSSTAPVPPISEVQVASVQEQR-----------KASLLGSHVMGVIDGKFEHG 441
              TP+P      PV P  E Q A +Q+QR            AS   S V+GVIDGKFE G
Sbjct: 166  SITPVPSHGLAEPVLPSPESQPAGIQQQRISSADIFPGASPASSTASPVIGVIDGKFESG 225

Query: 442  YLVTVSVGTQQLQGVLYHLFSNPTDHAPSHTVVSANNKGRDTAPLAVXXXXXXXXXXXXX 621
            YLVTV++GT++L+GVLY     P    P +  V  NN     A   V             
Sbjct: 226  YLVTVTIGTEKLKGVLYEAPQTPARQVPQYFSVITNNTESTPAAPTVHRRRRRKKSEIKK 285

Query: 622  XDPAHPKPNRSGYNFFFQEQHARLKPLHPGKDREISKMIGELWSKVTETEKAVYQERGLK 801
             DPAHPKPNRSGYNFFF EQHARLKPLHPGKDREIS+MIGELW+K+ E EKAVYQE+ +K
Sbjct: 286  RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVK 345

Query: 802  DKERYKCEMLVYKENLKRGQIISDAIPIQQRLAPPEVLMVEHDEK--MEVGEEDKLETEE 975
            DKERY+ EM  Y+E LK GQIISDA+PIQQRL   +V MVE + K  ME GE  +    E
Sbjct: 346  DKERYRVEMEDYRERLKMGQIISDAVPIQQRLPHADVDMVEAEAKTEMEGGESPQTPENE 405

Query: 976  DDSGEEDQMEDDSIHTLENGSSLGGSDSEEKTADMVSEMEISVGVENKIESDNV------ 1137
              SG+ D  +DD               + EK  DM +   + VGVE   E  NV      
Sbjct: 406  SSSGKTDSDDDDK--------------TAEKEFDMETYPGVGVGVEGG-ECSNVVVVGME 450

Query: 1138 -ATKDDGFKLRKRDQNDGDERD 1200
             + +++ ++  KR +  G E +
Sbjct: 451  TSVEEETYESGKRVEKVGVESE 472


>ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-like [Vitis vinifera]
          Length = 482

 Score =  333 bits (854), Expect = 7e-89
 Identities = 187/382 (48%), Positives = 231/382 (60%), Gaps = 20/382 (5%)
 Frame = +1

Query: 115  VVRERRWKEITSVFKFPSTATNASFILRKYYVSLIHHYEQLYYFGAKGWTRSEPDPLLNS 294
            ++RERRWKE+T+VF FPSTATNASF+LRKYYVSL+HHYEQ+Y+F A+GW     D   + 
Sbjct: 105  IIRERRWKEVTAVFSFPSTATNASFVLRKYYVSLLHHYEQIYFFKAQGWAPISADASQSP 164

Query: 295  PPTPIPVQSSTAPVPPISEVQVASVQEQR-----------KASLLGSHVMGVIDGKFEHG 441
              TP+P      PV P  E Q A +Q+QR            AS   S V+GVIDGKFE G
Sbjct: 165  SITPVPSHGLAEPVLPSPESQPAGIQQQRISSADIFPGASPASSTASPVIGVIDGKFESG 224

Query: 442  YLVTVSVGTQQLQGVLYHLFSNPTDHAPSHTVVSANNKGRDTAPLAVXXXXXXXXXXXXX 621
            YLVTV++GT++L+GVLY     P    P +  V  NN     A   V             
Sbjct: 225  YLVTVTIGTEKLKGVLYEAPQTPARQVPQYFSVITNNTESTPAAPTVHRRRRRKKSEIKK 284

Query: 622  XDPAHPKPNRSGYNFFFQEQHARLKPLHPGKDREISKMIGELWSKVTETEKAVYQERGLK 801
             DPAHPKPNRSGYNFFF EQHARLKPLHPGKDREIS+MIGELW+K+ E EKAVYQE+ +K
Sbjct: 285  RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVK 344

Query: 802  DKERYKCEMLVYKENLKRGQIISDAIPIQQRLAPPEVLMVEHDEK--MEVGEEDKLETEE 975
            DKERY+ EM  Y+E LK GQIISDA+PIQQRL   +V MVE + K  ME GE  +    E
Sbjct: 345  DKERYRVEMEDYRERLKMGQIISDAVPIQQRLPHADVDMVEAEAKTEMEGGESPQTPENE 404

Query: 976  DDSGEEDQMEDDSIHTLENGSSLGGSDSEEKTADMVSEMEISVGVENKIESDNV------ 1137
              SG+ D  +DD               + EK  DM +   + VGVE   E  NV      
Sbjct: 405  SSSGKTDSDDDDK--------------TAEKEFDMETYPGVGVGVEGG-ECSNVVVVGME 449

Query: 1138 -ATKDDGFKLRKRDQNDGDERD 1200
             + +++ ++  KR +  G E +
Sbjct: 450  TSVEEETYESGKRVEKVGVESE 471


>emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]
          Length = 461

 Score =  333 bits (854), Expect = 7e-89
 Identities = 187/382 (48%), Positives = 231/382 (60%), Gaps = 20/382 (5%)
 Frame = +1

Query: 115  VVRERRWKEITSVFKFPSTATNASFILRKYYVSLIHHYEQLYYFGAKGWTRSEPDPLLNS 294
            ++RERRWKE+T+VF FPSTATNASF+LRKYYVSL+HHYEQ+Y+F A+GW     D   + 
Sbjct: 84   IIRERRWKEVTAVFSFPSTATNASFVLRKYYVSLLHHYEQIYFFKAQGWAPISADASQSP 143

Query: 295  PPTPIPVQSSTAPVPPISEVQVASVQEQR-----------KASLLGSHVMGVIDGKFEHG 441
              TP+P      PV P  E Q A +Q+QR            AS   S V+GVIDGKFE G
Sbjct: 144  SITPVPSHGLAEPVLPSPESQPAGIQQQRISSADIFPGASPASSTASPVIGVIDGKFESG 203

Query: 442  YLVTVSVGTQQLQGVLYHLFSNPTDHAPSHTVVSANNKGRDTAPLAVXXXXXXXXXXXXX 621
            YLVTV++GT++L+GVLY     P    P +  V  NN     A   V             
Sbjct: 204  YLVTVTIGTEKLKGVLYEAPQTPARQVPQYFSVITNNTESTPAAPTVHRRRRRKKSEIKK 263

Query: 622  XDPAHPKPNRSGYNFFFQEQHARLKPLHPGKDREISKMIGELWSKVTETEKAVYQERGLK 801
             DPAHPKPNRSGYNFFF EQHARLKPLHPGKDREIS+MIGELW+K+ E EKAVYQE+ +K
Sbjct: 264  RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVK 323

Query: 802  DKERYKCEMLVYKENLKRGQIISDAIPIQQRLAPPEVLMVEHDEK--MEVGEEDKLETEE 975
            DKERY+ EM  Y+E LK GQIISDA+PIQQRL   +V MVE + K  ME GE  +    E
Sbjct: 324  DKERYRVEMEDYRERLKMGQIISDAVPIQQRLPHADVDMVEAEAKTEMEGGESPQTPENE 383

Query: 976  DDSGEEDQMEDDSIHTLENGSSLGGSDSEEKTADMVSEMEISVGVENKIESDNV------ 1137
              SG+ D  +DD               + EK  DM +   + VGVE   E  NV      
Sbjct: 384  SSSGKTDSDDDDK--------------TAEKEFDMETYPGVGVGVEGG-ECSNVVVVGME 428

Query: 1138 -ATKDDGFKLRKRDQNDGDERD 1200
             + +++ ++  KR +  G E +
Sbjct: 429  TSVEEETYESGKRVEKVGVESE 450


>ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
          Length = 425

 Score =  316 bits (810), Expect = 9e-84
 Identities = 166/317 (52%), Positives = 209/317 (65%), Gaps = 10/317 (3%)
 Frame = +1

Query: 115  VVRERRWKEITSVFKFPSTATNASFILRKYYVSLIHHYEQLYYFGAKGWTRSEPDPLLNS 294
            ++RER+WK++TSVF FPSTATNASF+LRKYY SL++HYEQ+Y+F A+ W  + PD L N 
Sbjct: 85   IIRERKWKDVTSVFNFPSTATNASFVLRKYYASLLYHYEQIYFFKAREWDPTAPDALQNQ 144

Query: 295  PPTPIPVQSSTAPVPPISEVQVASVQ----------EQRKASLLGSHVMGVIDGKFEHGY 444
               P+P      P  P+SE+Q A  Q          E   AS  GS V+GVIDGKFE GY
Sbjct: 145  STLPVPPPKMQFP-QPLSEIQPAVFQQSNINAAKLPEAMAASSAGSPVIGVIDGKFESGY 203

Query: 445  LVTVSVGTQQLQGVLYHLFSNPTDHAPSHTVVSANNKGRDTAPLAVXXXXXXXXXXXXXX 624
            LVTV++G+++L+GVLY    NP   A  H+  + NN    +A L V              
Sbjct: 204  LVTVTIGSEKLKGVLYQAPQNPVLVASHHSASAKNNNA--SASLGVHRRRRRKKSEIKRR 261

Query: 625  DPAHPKPNRSGYNFFFQEQHARLKPLHPGKDREISKMIGELWSKVTETEKAVYQERGLKD 804
            DPAHPKPNRSGYNFFF EQHARLK LH GKDREIS+MIGELW+K+ E+EK VYQE+ +KD
Sbjct: 262  DPAHPKPNRSGYNFFFAEQHARLKLLHHGKDREISRMIGELWNKLKESEKTVYQEKAMKD 321

Query: 805  KERYKCEMLVYKENLKRGQIISDAIPIQQRLAPPEVLMVEHDEKMEVGEEDKLETEEDDS 984
            KERY+ EM  Y+E  K GQ+ISDA+P+QQRL  P+  M++ D KM+  E D  +T E+ S
Sbjct: 322  KERYRAEMEDYREKQKMGQVISDAVPLQQRLPEPDADMLDVDIKMDEAEGDSPQTPEESS 381

Query: 985  GEEDQMEDDSIHTLENG 1035
            G  D   +D   T E G
Sbjct: 382  GGSDY--EDYNKTAERG 396


>ref|XP_002518095.1| transcription factor, putative [Ricinus communis]
            gi|223542691|gb|EEF44228.1| transcription factor,
            putative [Ricinus communis]
          Length = 466

 Score =  314 bits (805), Expect = 3e-83
 Identities = 179/371 (48%), Positives = 233/371 (62%), Gaps = 25/371 (6%)
 Frame = +1

Query: 115  VVRERRWKEITSVFKFPSTATNASFILRKYYVSLIHHYEQLYYFGAKGWTRSEPDPLLNS 294
            ++RERRWKE+T++F FPSTATNASF+LRKYY SL+HHYEQLY+F A+GWT     P+ + 
Sbjct: 84   IIRERRWKEVTAIFNFPSTATNASFVLRKYYGSLLHHYEQLYFFKARGWTPGSSVPMQSP 143

Query: 295  PPTPIPVQSSTAPVPPISEVQVASVQEQRK----------ASLLGSHVMGVIDGKFEHGY 444
              + +P Q +  P P   E Q A+ Q+QR           AS   S VMGVIDGKFE GY
Sbjct: 144  LASRLPAQVTVQPSP---EYQAATAQQQRTNTAELYGARIASSGSSQVMGVIDGKFESGY 200

Query: 445  LVTVSVGTQQLQGVLYHLFSNPTDHAPSHTVVSANNKGRDTAPLAVXXXXXXXXXXXXXX 624
            LVTV++GT++L+GVLY    N     P    + ANN G   A   +              
Sbjct: 201  LVTVTIGTEKLKGVLYQAPQNHPGQEPQSYSIPANNTGDARAASGMQRRRRRRKKNEIKR 260

Query: 625  -DPAHPKPNRSGYNFFFQEQHARLKPLHPGKDREISKMIGELWSKVTETEKAVYQERGLK 801
             DPAHPKPNRSGYNFFF EQHARLKPL+PGKDREIS+MIGELWS V ETEKAVYQE+ +K
Sbjct: 261  RDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWSNVNETEKAVYQEKAVK 320

Query: 802  DKERYKCEMLVYKENLKRGQIISDAIPIQQRLAPPEVLMVEHDEKM-EVGEEDKLETEED 978
            DKERY+ EM  Y+E L+ G++ISDA+P+QQ L   +  MV+ D K  E+  ED L+T E+
Sbjct: 321  DKERYRIEMEDYRERLRTGRVISDAVPLQQWLPEHDSDMVDADIKTDEIEGEDSLQTPEN 380

Query: 979  D--SGEEDQMEDDSI--HTLENGSSL----GGSDSE---EKTADMVSEMEISVGVENKIE 1125
            +  SG+ D  ++D     +L+  +SL    G  D +   E  A  ++  E ++G +   +
Sbjct: 381  ESSSGKSDSADEDDTAKESLDRAASLNIHAGHMDIDSPAEAPASSLANKEENIGDQGADK 440

Query: 1126 SDNVAT--KDD 1152
              N+    KDD
Sbjct: 441  VGNIGEQHKDD 451


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