BLASTX nr result
ID: Coptis21_contig00009292
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00009292 (1084 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324968.1| predicted protein [Populus trichocarpa] gi|2... 70 9e-10 gb|AFK38245.1| unknown [Medicago truncatula] 64 8e-08 ref|XP_002863136.1| hypothetical protein ARALYDRAFT_332982 [Arab... 61 4e-07 gb|AFK33985.1| unknown [Lotus japonicus] 59 2e-06 ref|NP_001078384.1| protein rotundifolia like 12 [Arabidopsis th... 59 2e-06 >ref|XP_002324968.1| predicted protein [Populus trichocarpa] gi|222866402|gb|EEF03533.1| predicted protein [Populus trichocarpa] Length = 59 Score = 70.1 bits (170), Expect = 9e-10 Identities = 30/39 (76%), Positives = 32/39 (82%) Frame = +3 Query: 114 KNSFSKRCSSMVKQQKTRFYILGRCVSMLLCWRSHAIPD 230 KN F +RC SM KQQKTRFYILGRC+SMLLCW HAI D Sbjct: 21 KNGFRRRCLSMAKQQKTRFYILGRCISMLLCWHDHAIRD 59 >gb|AFK38245.1| unknown [Medicago truncatula] Length = 45 Score = 63.5 bits (153), Expect = 8e-08 Identities = 25/41 (60%), Positives = 32/41 (78%) Frame = +3 Query: 108 CRKNSFSKRCSSMVKQQKTRFYILGRCVSMLLCWRSHAIPD 230 C+K SF+KRC SM KQ K R +I GRC++MLLCW +H+I D Sbjct: 5 CKKTSFTKRCFSMAKQHKARIHIFGRCLTMLLCWHNHSISD 45 >ref|XP_002863136.1| hypothetical protein ARALYDRAFT_332982 [Arabidopsis lyrata subsp. lyrata] gi|297308970|gb|EFH39395.1| hypothetical protein ARALYDRAFT_332982 [Arabidopsis lyrata subsp. lyrata] Length = 51 Score = 61.2 bits (147), Expect = 4e-07 Identities = 27/40 (67%), Positives = 29/40 (72%) Frame = +3 Query: 111 RKNSFSKRCSSMVKQQKTRFYILGRCVSMLLCWRSHAIPD 230 RK SF RC M KQQ+TR YIL RCVSMLLCW H+I D Sbjct: 12 RKTSFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSISD 51 >gb|AFK33985.1| unknown [Lotus japonicus] Length = 86 Score = 59.3 bits (142), Expect = 2e-06 Identities = 22/49 (44%), Positives = 38/49 (77%) Frame = +3 Query: 75 STHYQPRQYQSCRKNSFSKRCSSMVKQQKTRFYILGRCVSMLLCWRSHA 221 ST++ + Q RK +F+++C+ +VK+Q+ RFYI+ RCV+ML+CWR ++ Sbjct: 36 STNFMKKSSQEQRKCAFARKCARLVKEQRARFYIMRRCVTMLICWRDYS 84 >ref|NP_001078384.1| protein rotundifolia like 12 [Arabidopsis thaliana] gi|42822053|tpg|DAA02281.1| TPA_exp: DVL10 [Arabidopsis thaliana] gi|332657874|gb|AEE83274.1| protein rotundifolia like 12 [Arabidopsis thaliana] Length = 55 Score = 59.3 bits (142), Expect = 2e-06 Identities = 26/40 (65%), Positives = 28/40 (70%) Frame = +3 Query: 111 RKNSFSKRCSSMVKQQKTRFYILGRCVSMLLCWRSHAIPD 230 RK F RC M KQQ+TR YIL RCVSMLLCW H+I D Sbjct: 16 RKTRFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSISD 55