BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009290
         (1295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]   353   4e-95
ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chlorop...   343   4e-92
ref|XP_002309469.1| predicted protein [Populus trichocarpa] gi|2...   330   4e-88
ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus ...   327   3e-87
ref|XP_003521065.1| PREDICTED: 50S ribosomal protein L4, chlorop...   310   4e-82

>emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]
          Length = 306

 Score =  353 bits (907), Expect = 4e-95
 Identities = 184/250 (73%), Positives = 203/250 (81%), Gaps = 3/250 (1%)
 Frame = +3

Query: 99  ILPKSPHQNPKSLSSFKP---LNPLSTHSQKTPTSIHAQLSTIPILSFEGEKIGETYLDL 269
           I   S  QNP  LS+FKP   L PL       P S+ + L  IPILSF GEK+GET L+L
Sbjct: 17  IFGSSSRQNPNFLSTFKPNSFLKPLK------PLSVRSDLVAIPILSFTGEKVGETQLNL 70

Query: 270 KSAPPETARAVVHRGIITDQQNSRRGTASTLTRAEVRGGGKKPYPQKKTGRARRGSQRTP 449
           KSAP +TARAVVHRGIITD QN RRGTASTLTR EVRGGGKKPYPQKKTGRARRGSQRTP
Sbjct: 71  KSAPLDTARAVVHRGIITDLQNRRRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTP 130

Query: 450 LRXXXXXXXXXXXXDWSIKINRKEKRLAISTALASASVNTIVVEDFVDKFDKPKTKEFIE 629
           LR            DWSIKINRKEKRLAISTA++SA+VNTIVVEDF DKFDKPKTKEFI 
Sbjct: 131 LRPGGGVVFGPKPRDWSIKINRKEKRLAISTAMSSAAVNTIVVEDFSDKFDKPKTKEFIS 190

Query: 630 ALKRWGLDPNEKSMFLLNEVSDNVKLSSRNIGTVKMLTPRTLNLFDILNADKVVLTKTTV 809
           A+KRWG+DP EKSMFL+ EVSDNV+LSSRNIGT+KMLTPRTLNLFDILN+DK+VLT+ TV
Sbjct: 191 AMKRWGIDPKEKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNSDKLVLTQETV 250

Query: 810 DYLNRMYGLD 839
           DYLNRMY ++
Sbjct: 251 DYLNRMYAVE 260


>ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis
           sativus] gi|449496602|ref|XP_004160176.1| PREDICTED: 50S
           ribosomal protein L4, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score =  343 bits (881), Expect = 4e-92
 Identities = 176/247 (71%), Positives = 200/247 (80%)
 Frame = +3

Query: 102 LPKSPHQNPKSLSSFKPLNPLSTHSQKTPTSIHAQLSTIPILSFEGEKIGETYLDLKSAP 281
           L    HQN   L+ F    P S   Q    SI ++L+T+P+LSF G+K+GETYLDLKSAP
Sbjct: 19  LSSPSHQN---LNLFFNSKPNSLKPQTKTLSISSELATLPVLSFTGQKVGETYLDLKSAP 75

Query: 282 PETARAVVHRGIITDQQNSRRGTASTLTRAEVRGGGKKPYPQKKTGRARRGSQRTPLRXX 461
           PETARAVVHR IITDQQN RRGTASTLTRAEV GGGKKPY QKKTGRARRGS RTPLR  
Sbjct: 76  PETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGKKPYKQKKTGRARRGSMRTPLRPG 135

Query: 462 XXXXXXXXXXDWSIKINRKEKRLAISTALASASVNTIVVEDFVDKFDKPKTKEFIEALKR 641
                     DWSIKINRKEK+LAISTA+ASA+VNTIVVE+F DKF+KPKTKEFI ALKR
Sbjct: 136 GGVVFGPKPRDWSIKINRKEKKLAISTAVASAAVNTIVVEEFGDKFEKPKTKEFIAALKR 195

Query: 642 WGLDPNEKSMFLLNEVSDNVKLSSRNIGTVKMLTPRTLNLFDILNADKVVLTKTTVDYLN 821
           WG+DP EKS+FL+ EVSDNV+LSSRNIGT+K+LTPRTLNLFDIL++DK+VLT T VDYLN
Sbjct: 196 WGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPTAVDYLN 255

Query: 822 RMYGLDY 842
             YG++Y
Sbjct: 256 ERYGINY 262


>ref|XP_002309469.1| predicted protein [Populus trichocarpa] gi|222855445|gb|EEE92992.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  330 bits (847), Expect = 4e-88
 Identities = 177/252 (70%), Positives = 200/252 (79%), Gaps = 5/252 (1%)
 Frame = +3

Query: 102 LPKSPHQNPK--SLSSFKPLNPLSTHSQKTPTSIHAQLSTIPILSFEGEKIGETYLDLKS 275
           L  S ++ PK  SLS+ KP   L +       SI  Q++T+PILSF GEKIGETYLDLKS
Sbjct: 16  LSSSHNKIPKLTSLSTTKPQYSLKS------LSISCQVATLPILSFTGEKIGETYLDLKS 69

Query: 276 APPETARAVVHRGIITDQQNSRRGTASTLTRAEVRGGGKKPYPQKKTGRARRGSQRTPLR 455
           APPETARAVVHRGIITDQQN RRGTASTLTR EVRGGG+KPYPQKKTGRARRGS R+PLR
Sbjct: 70  APPETARAVVHRGIITDQQNKRRGTASTLTRGEVRGGGRKPYPQKKTGRARRGSMRSPLR 129

Query: 456 XXXXXXXXXXXXDWSIKINRKEKRLAISTALASA---SVNTIVVEDFVDKFDKPKTKEFI 626
                       DWSIKINRKEKRLA+STAL+SA   S + I VE+F DKF+KPKTKEFI
Sbjct: 130 PGGGVIFGPKPRDWSIKINRKEKRLAMSTALSSAASESESVICVEEFGDKFEKPKTKEFI 189

Query: 627 EALKRWGLDPNEKSMFLLNEVSDNVKLSSRNIGTVKMLTPRTLNLFDILNADKVVLTKTT 806
           EA+ RWGLDP EK MFL+ +VSDNV LSSRNIGT++MLTPRTLNLFDILN+DK+VLT  T
Sbjct: 190 EAMNRWGLDPKEKVMFLMMDVSDNVGLSSRNIGTLRMLTPRTLNLFDILNSDKLVLTPDT 249

Query: 807 VDYLNRMYGLDY 842
           VDYLN  YG+D+
Sbjct: 250 VDYLNGRYGVDF 261


>ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus communis]
           gi|223535036|gb|EEF36718.1| 50S ribosomal protein L4,
           putative [Ricinus communis]
          Length = 283

 Score =  327 bits (839), Expect = 3e-87
 Identities = 169/238 (71%), Positives = 192/238 (80%)
 Frame = +3

Query: 126 PKSLSSFKPLNPLSTHSQKTPTSIHAQLSTIPILSFEGEKIGETYLDLKSAPPETARAVV 305
           PK  S  KP N L+  +     SI  Q+ST+PILSF GEKIGETYLDLK+APP+TARAVV
Sbjct: 25  PKFQSFSKP-NSLNPPNSSLSLSISCQVSTLPILSFTGEKIGETYLDLKTAPPDTARAVV 83

Query: 306 HRGIITDQQNSRRGTASTLTRAEVRGGGKKPYPQKKTGRARRGSQRTPLRXXXXXXXXXX 485
           HR IITDQQN RRGTASTLTRAEVRGGGKKPY QKKTGRARRGS RTPLR          
Sbjct: 84  HRAIITDQQNKRRGTASTLTRAEVRGGGKKPYQQKKTGRARRGSSRTPLRPGGGVIFGPK 143

Query: 486 XXDWSIKINRKEKRLAISTALASASVNTIVVEDFVDKFDKPKTKEFIEALKRWGLDPNEK 665
             DWSIKIN+KEKRLAISTAL SA+ + + VE+F DKF+KPKTK+FIEA+KRWGLDP EK
Sbjct: 144 PRDWSIKINKKEKRLAISTALCSATESMLCVEEFGDKFEKPKTKDFIEAMKRWGLDPKEK 203

Query: 666 SMFLLNEVSDNVKLSSRNIGTVKMLTPRTLNLFDILNADKVVLTKTTVDYLNRMYGLD 839
            MFL+ +V+D+V LSSRNIGT++MLTPRTLNLFDILN+DK+VLT   VDYLN  YG+D
Sbjct: 204 VMFLMMDVADSVGLSSRNIGTLRMLTPRTLNLFDILNSDKLVLTPDAVDYLNGRYGVD 261


>ref|XP_003521065.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 2
           [Glycine max]
          Length = 301

 Score =  310 bits (795), Expect = 4e-82
 Identities = 160/246 (65%), Positives = 192/246 (78%), Gaps = 2/246 (0%)
 Frame = +3

Query: 111 SPHQNPKSLSSFKPLNPLSTHSQKTPTSIHAQLST-IPILSFEGEKIGETYLDLKSAPPE 287
           S HQ     +SFK  N       K P SI  + S  +P+L+F GE++GE++LDL+SAPP+
Sbjct: 27  SSHQFHTHNNSFKS-NSFPVLPSKKPLSISCKASPPLPVLNFSGERVGESFLDLRSAPPD 85

Query: 288 TARAVVHRGIITDQQNSRRGTASTLTRAEVRGGGKKPYPQKKTGRARRGSQRTPLRXXXX 467
           TARAVVHR ++TD QN RRGTASTLTR EVRGGG+KP+PQKKTGRARRGS RTPLR    
Sbjct: 86  TARAVVHRAVVTDLQNKRRGTASTLTRGEVRGGGRKPFPQKKTGRARRGSNRTPLRPGGG 145

Query: 468 XXXXXXXXDWSIKINRKEKRLAISTALASASVNTIVVEDFVDKF-DKPKTKEFIEALKRW 644
                   DWSIKINRKEKRLAISTA+ASA+ + +VVEDF  +F +KPKTKEFI A+KRW
Sbjct: 146 VIFGPKPRDWSIKINRKEKRLAISTAVASAAASAVVVEDFAAEFAEKPKTKEFIAAMKRW 205

Query: 645 GLDPNEKSMFLLNEVSDNVKLSSRNIGTVKMLTPRTLNLFDILNADKVVLTKTTVDYLNR 824
           GLDP EK+MFL+ EV +NV+LSSRNIGT+KM TPRTLNL+DIL+ADK+VLT+  VDYLN+
Sbjct: 206 GLDPKEKAMFLMTEVPENVRLSSRNIGTLKMHTPRTLNLYDILDADKLVLTQGAVDYLNQ 265

Query: 825 MYGLDY 842
            YG DY
Sbjct: 266 RYGGDY 271