BLASTX nr result

ID: Coptis21_contig00009289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009289
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268235.1| PREDICTED: uncharacterized protein LOC100261...   121   7e-26
ref|XP_002524503.1| conserved hypothetical protein [Ricinus comm...   109   3e-22
ref|XP_002325224.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002308986.1| predicted protein [Populus trichocarpa] gi|2...   109   4e-22
ref|XP_002299755.1| predicted protein [Populus trichocarpa] gi|1...   108   7e-22

>ref|XP_002268235.1| PREDICTED: uncharacterized protein LOC100261053 [Vitis vinifera]
           gi|297743449|emb|CBI36316.3| unnamed protein product
           [Vitis vinifera]
          Length = 132

 Score =  121 bits (304), Expect = 7e-26
 Identities = 72/135 (53%), Positives = 91/135 (67%)
 Frame = +2

Query: 56  MSSILISQGMVFATAMAVSGTVFLLAFRRTKSTDHQFITINQNSDSRTPQILRSCLSLDG 235
           MSSIL SQG+V ATAMAVSG +FL AF R KS      + N NS +   QILRSCL+ D 
Sbjct: 1   MSSILCSQGVVLATAMAVSGILFL-AFSRQKSLPSPEFSGNPNSQA-PKQILRSCLTNDE 58

Query: 236 KRREKKKKRVHFADDVVDHPTRNGDDFRRECRQSMRPNYQDCGFQNRNKQTMPENRMALY 415
           K+RE+KKKRV FA++V + P+ NG +FR+E R+      + C  +    Q +PEN+ ALY
Sbjct: 59  KKRERKKKRVQFAENVKE-PSGNGKEFRQEQRKKFSRVQRPCRNEIPQIQKVPENQAALY 117

Query: 416 NGILRDRIQRTTCSY 460
           NGILRDR+ R  CSY
Sbjct: 118 NGILRDRVHRMACSY 132


>ref|XP_002524503.1| conserved hypothetical protein [Ricinus communis]
           gi|223536291|gb|EEF37943.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score =  109 bits (273), Expect = 3e-22
 Identities = 66/140 (47%), Positives = 88/140 (62%), Gaps = 12/140 (8%)
 Frame = +2

Query: 56  MSSILISQGMVFATAMAVSGTVFLLAFRRTKSTDHQFITINQ---NSDSRTPQILRSCLS 226
           M+S+L SQGMV ATAMAVSGTV LLA R  KS     + + Q    S  +   +LRSC+S
Sbjct: 1   MTSMLCSQGMVLATAMAVSGTVILLALRLQKSLPPSLLPMEQQIPQSSHQQQAVLRSCIS 60

Query: 227 LDGKR--REKKKKRVHFADDVVDHPTRNGDDFRRE-------CRQSMRPNYQDCGFQNRN 379
            +GK+  ++KKKKRVHFA+DVVD P  +G++FRR+          S  P ++        
Sbjct: 61  SEGKKTNKKKKKKRVHFAEDVVD-PRGDGEEFRRQHGAIVVAKNSSSPPKFKKSSGAGVK 119

Query: 380 KQTMPENRMALYNGILRDRI 439
            + MP NR+ALY+GILRDR+
Sbjct: 120 AREMPANRVALYHGILRDRV 139


>ref|XP_002325224.1| predicted protein [Populus trichocarpa] gi|222866658|gb|EEF03789.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  109 bits (273), Expect = 3e-22
 Identities = 70/145 (48%), Positives = 92/145 (63%), Gaps = 11/145 (7%)
 Frame = +2

Query: 56  MSSILISQGMVFATAMAVSGTVFLLAFRRTKS--TDHQFITINQNSDSRTPQILRSCLSL 229
           MSS L SQG+V ATAMAVSGTV +LAFR  KS     QF   +      + Q LRSC+S 
Sbjct: 1   MSSSLCSQGVVLATAMAVSGTVIVLAFRLQKSHLPSGQFPGDHHQIPQSSQQALRSCISP 60

Query: 230 DGKRREKKKKRVHFADDVVDHPTRNGDDFRRECRQSMRPNYQDCGF--------QNRNKQ 385
           +GK+++ KKKRVHFA+DVVD P  +G++FRR+  +++  +   C          +N  ++
Sbjct: 61  EGKKKKGKKKRVHFAEDVVD-PRGDGEEFRRQ-HEAVFLSQNSCSSSSTSTEFKKNGQQR 118

Query: 386 TMPENRMALYNGILRDR-IQRTTCS 457
            MP NR ALYNGILRDR +QR   S
Sbjct: 119 RMPANRAALYNGILRDRGVQRLAYS 143


>ref|XP_002308986.1| predicted protein [Populus trichocarpa] gi|222854962|gb|EEE92509.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  109 bits (272), Expect = 4e-22
 Identities = 72/142 (50%), Positives = 93/142 (65%), Gaps = 12/142 (8%)
 Frame = +2

Query: 56  MSSILISQGMVFATAMAVSGTVFLLAFRRTKS--TDHQF-ITINQNSDSRTPQILRSCLS 226
           MSS+L SQG+V ATAMAVSGTV LLAFR  KS     QF I ++      +PQ LRSC+S
Sbjct: 1   MSSMLCSQGVVLATAMAVSGTVILLAFRLQKSLLPSGQFPIDLHHRIAQSSPQALRSCIS 60

Query: 227 LDGKRREKKKKRVHFADDVVDHPTRNGDDFRRECRQSMRPNYQDCGF--------QNRNK 382
            +GK++  KKKRVHFA+DVVD P  +G +FRR+  +++  +   C          +N  +
Sbjct: 61  SEGKKK-GKKKRVHFAEDVVD-PRGDGQEFRRQ-HEAIFLSQNSCSSSSTSTEFKKNGQQ 117

Query: 383 QTMPENRMALYNGILRDR-IQR 445
           + MP NR ALYNGILRDR +QR
Sbjct: 118 RRMPANRAALYNGILRDRGVQR 139


>ref|XP_002299755.1| predicted protein [Populus trichocarpa] gi|118487551|gb|ABK95602.1|
           unknown [Populus trichocarpa]
           gi|222847013|gb|EEE84560.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  108 bits (270), Expect = 7e-22
 Identities = 69/148 (46%), Positives = 92/148 (62%), Gaps = 11/148 (7%)
 Frame = +2

Query: 56  MSSILISQGMVFATAMAVSGTVFLLAFRRTKSTDHQFITINQNSDSRTP-QILRSCLSLD 232
           MSS L SQG+V AT MAVS TV  LAF + K+  HQ ++ +++S+S TP Q LRSCLS +
Sbjct: 1   MSSKLTSQGVVLATVMAVSSTVVFLAFSKQKTLPHQVLSESRDSESPTPSQDLRSCLSTE 60

Query: 233 GKRREKKKKRVHFADDVVDHPTRNGDDFRRECRQ----------SMRPNYQDCGFQNRNK 382
           GKR   KKKRV FA++ V +   NGD++RRE +           S     + C  + +  
Sbjct: 61  GKR---KKKRVQFAEN-VKNTKGNGDEYRRERQNPWITRREREVSNTRMSRVCRNEIQGN 116

Query: 383 QTMPENRMALYNGILRDRIQRTTCSY*F 466
             MPENR+ALY+GIL DR+ +  CSY F
Sbjct: 117 HGMPENRVALYSGILVDRVHKMECSYLF 144


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