BLASTX nr result

ID: Coptis21_contig00009284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009284
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37917.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002547246.1| conserved hypothetical protein [Candida trop...    65   4e-09
ref|XP_712836.1| questionable orf [Candida albicans SC5314] gi|6...    62   5e-08
ref|XP_003633295.1| PREDICTED: uncharacterized protein LOC100853...    59   5e-07
emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera]    59   5e-07

>emb|CBI37917.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/118 (33%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
 Frame = +3

Query: 9   VNGWLRLLVYWDMWWVWLFVY---WWLRLLVYWDMWWMWFLVFWNFWWTWLFVYGDWWW- 176
           V  W    V W+  W WL  Y    W+ LL  W+    WF + WN    W  ++   WW 
Sbjct: 15  VGNWF---VNWNWRWKWLLYYRKRRWIWLLEGWNWRRQWFPIDWNRRRKWFIIHWTRWWE 71

Query: 177 --LVNWDGWGQRLLVY-WWFDNWRGLVNWYXXXXXXXXXXXXXXXXFFVYGDWWWLVN 341
             L NW+ W +RLLVY  W   W  LV W+                  VYG WWW+++
Sbjct: 72  WLLRNWNWWWKRLLVYGHWRWKWL-LVYWHWRWKWLSIHSYWWRKGLMVYGHWWWMIS 128



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 14/84 (16%)
 Frame = +3

Query: 30  LVYWDMWWVWL---FVYWWLRLLVYWDMWWMWFLVFWNFWWTWLFV-----------YGD 167
           +++W  WW WL   + +WW RLLVY    W W LV+W++ W WL +           YG 
Sbjct: 63  IIHWTRWWEWLLRNWNWWWKRLLVYGHWRWKWLLVYWHWRWKWLSIHSYWWRKGLMVYGH 122

Query: 168 WWWLVNWDGWGQRLLVYWWFDNWR 239
           WWW++++  W +   V  W  +WR
Sbjct: 123 WWWMISF--WCR---VCNWSRDWR 141


>ref|XP_002547246.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
           gi|240135137|gb|EER34691.1| conserved hypothetical
           protein [Candida tropicalis MYA-3404]
          Length = 121

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
 Frame = +3

Query: 18  WLRLLVYWDMWWVW------LFVYWWLRLLVYWDMWWMWFLVFWNFWWTWLFVYGDWWWL 179
           W    + W MWW+W      ++  WW    + W MWWMW+ + W  W+ W  ++    W 
Sbjct: 48  WSMRWMIWVMWWMWWSMIWVIWFMWWSMRWMIWVMWWMWWSMIWVIWFMWWSMWRSMRWS 107

Query: 180 VNWDGWGQRLLVYWWF 227
           + W  W   LL + WF
Sbjct: 108 MRWILW---LLWFLWF 120



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
 Frame = +3

Query: 33  VYWDMWWVW----------LFVYWWLRLLVYWDMWWMWFLVFWNFWWTWLFVYGDWWWLV 182
           V W +W +W          ++  WW    + W MWWMW+ + W  W+ W  +   W   V
Sbjct: 24  VIWVIWVIWVIWVIWVIWVIWFMWWSMRWMIWVMWWMWWSMIWVIWFMWWSM--RWMIWV 81

Query: 183 NWDGWGQRLLVYW--WFDNWRGL 245
            W  W   + V W  W+  WR +
Sbjct: 82  MWWMWWSMIWVIWFMWWSMWRSM 104


>ref|XP_712836.1| questionable orf [Candida albicans SC5314]
           gi|68486626|ref|XP_712807.1| questionable orf [Candida
           albicans SC5314] gi|46434222|gb|EAK93638.1| questionable
           orf [Candida albicans SC5314] gi|46434252|gb|EAK93667.1|
           questionable orf [Candida albicans SC5314]
          Length = 190

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
 Frame = +3

Query: 18  WLRLLVYWDMWWV-WLFVYWWLRLLVYWDMWWM--WFLVFWNFWWTWLFVYGDWWWLVNW 188
           W+  +++W +WWV W  V W++R  + W M W   WF+ ++  W+ W FV     W + W
Sbjct: 5   WVVWIMWWVVWWVVWWVVRWFMRWFMRWFMRWFMRWFVGWFMRWFMWWFVGWFMRWFMRW 64

Query: 189 DGWGQRLLVYWWFDNW--RGLVNWY 257
             W        WF  W  R  V W+
Sbjct: 65  FMWRMMRWFVGWFMRWFMRWFVRWF 89


>ref|XP_003633295.1| PREDICTED: uncharacterized protein LOC100853570 [Vitis vinifera]
          Length = 421

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
 Frame = +3

Query: 30  LVYWDMWWVWLFVYWWLRLLVYWDMWW--MWFLVFWNFWWTWLFVYGDWWWLVNWDGW-- 197
           L +W  WW     +WW R   +W  WW   W+   W +W TW      WWW      W  
Sbjct: 107 LWWWTWWWPRWRTWWWPRWRTWWRTWWWTWWWPRRWRWWRTW------WWWRRKGRWWRR 160

Query: 198 -----GQRLLVYWWFDNWRGLVNW 254
                 +R   +WW+ +WR    W
Sbjct: 161 RPAWRWRRWRTWWWWWSWRRAWWW 184


>emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera]
          Length = 358

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
 Frame = +3

Query: 18  WLRLLVYWDMWW----VWLFVYWWLRLLVYWDM-WWMWFLVFWNF--WWTWLFVYGDWWW 176
           W RL+  W  WW    VWL  +WW R++  W + WW W LV  +   WW  L +   WWW
Sbjct: 195 WWRLVFVWWWWWRVVHVWLLRWWWWRVVHVWLLGWWWWGLVLVDRRRWWWRLVLIWWWWW 254

Query: 177 LVNWDGWGQR 206
            +    W +R
Sbjct: 255 RLILVNWRRR 264



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
 Frame = +3

Query: 18  WLRLLVYWDMWWVWL-FVYWWLRLLVYWDMWWMWFLVFWNFWWTWLFVY--GDWWW---L 179
           W  +LV W   W  L FV+WW     +W +  +W L +W  WW  + V+  G WWW   L
Sbjct: 184 WGLVLVDWRRRWWRLVFVWWW-----WWRVVHVWLLRWW--WWRVVHVWLLGWWWWGLVL 236

Query: 180 VNWDGWGQRLLVYWWFDNWR-GLVNW 254
           V+   W  RL++ WW+  WR  LVNW
Sbjct: 237 VDRRRWWWRLVLIWWW-WWRLILVNW 261


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