BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009275
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|2...   177   3e-42
emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera]   173   3e-41
emb|CBI26097.3| unnamed protein product [Vitis vinifera]              169   4e-40
ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topor...   169   4e-40
ref|NP_850310.1| RING/U-box domain-containing protein [Arabidops...   147   2e-33

>ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|222871537|gb|EEF08668.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  177 bits (448), Expect = 3e-42
 Identities = 91/168 (54%), Positives = 117/168 (69%), Gaps = 2/168 (1%)
 Frame = -2

Query: 714 RLRSELPSVNQHSRPLPWRRSFRQSRFNR--KEEIEERVLRWRASIYNRRLQAVPLPSKN 541
           R R+ L   N+ SRPLP RR F Q        + I +R L+WRASIYN+RL AVP+ S+N
Sbjct: 119 RQRAGLNVANRRSRPLPCRRRFGQPMPGSVGSDVIAQRKLQWRASIYNQRLHAVPISSRN 178

Query: 540 LPEQDTSRSSIFKERMQCRIKPWIQRELRAILQDPDPSVIVHLATSLYMLSLEEKLKASS 361
             +Q  SR+   K+R+  RI+PWIQREL+AIL+DPDPSVIVHLA+SL++ SLE +    S
Sbjct: 179 CLKQIISRNGCMKQRILHRIEPWIQRELQAILEDPDPSVIVHLASSLFIASLERRSDVQS 238

Query: 360 EHVDLEDKFVRQLRPFLQDHTNLFWHELRCFSESAFEMATYDSIVEYK 217
           + + +ED F+  LR FL   TN FWHELRCF+ES+  M TYD +VEYK
Sbjct: 239 DQLGVEDHFLEPLRRFLHGWTNTFWHELRCFAESSLTMETYDMVVEYK 286


>emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera]
          Length = 321

 Score =  173 bits (439), Expect = 3e-41
 Identities = 87/171 (50%), Positives = 118/171 (69%)
 Frame = -2

Query: 726 RSVRRLRSELPSVNQHSRPLPWRRSFRQSRFNRKEEIEERVLRWRASIYNRRLQAVPLPS 547
           R +RR   E  S  + +RPLPWRRSF +      + + ER+L+WRASIY++ +QAVP   
Sbjct: 122 RVIRRYWDEXNSDGRRTRPLPWRRSFGRPGSLPSDVVAERILQWRASIYSQGMQAVPFSP 181

Query: 546 KNLPEQDTSRSSIFKERMQCRIKPWIQRELRAILQDPDPSVIVHLATSLYMLSLEEKLKA 367
           +N  +Q+ S +S  KER+  RI+PWIQREL AIL DPDP+VIVH+ATSL++ SLEE    
Sbjct: 182 RNRLKQNISGNSSAKERILQRIEPWIQRELHAILHDPDPAVIVHVATSLFVSSLEENTPL 241

Query: 366 SSEHVDLEDKFVRQLRPFLQDHTNLFWHELRCFSESAFEMATYDSIVEYKP 214
              ++  ED F+  LR FL + TN FWHEL CF++S F M TYD++V+Y+P
Sbjct: 242 G--YLGGEDDFLAPLRSFLHNQTNTFWHELSCFADSTFNMETYDAVVKYEP 290


>emb|CBI26097.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  169 bits (429), Expect = 4e-40
 Identities = 86/171 (50%), Positives = 118/171 (69%)
 Frame = -2

Query: 726 RSVRRLRSELPSVNQHSRPLPWRRSFRQSRFNRKEEIEERVLRWRASIYNRRLQAVPLPS 547
           R +RR   E  S ++ +RPLPWRRSF +      + + ER+L+WRASIY++ +QAVP   
Sbjct: 92  RVLRRYWDESNSDSRRTRPLPWRRSFGRPGSLPSDVVAERILQWRASIYSQGMQAVPFSP 151

Query: 546 KNLPEQDTSRSSIFKERMQCRIKPWIQRELRAILQDPDPSVIVHLATSLYMLSLEEKLKA 367
           +N  +Q+ S +S  KER+  RI+PWIQREL AIL DPD +VIVH+ATSL++ SLEE    
Sbjct: 152 RNRLKQNISGNSSAKERILQRIEPWIQRELHAILHDPDAAVIVHVATSLFVSSLEENTPL 211

Query: 366 SSEHVDLEDKFVRQLRPFLQDHTNLFWHELRCFSESAFEMATYDSIVEYKP 214
              ++  ED F+  LR FL + TN FWHEL CF++S F M TYD++V+Y+P
Sbjct: 212 G--YLGGEDDFLAPLRSFLHNQTNTFWHELSCFADSTFNMETYDAVVKYEP 260


>ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Vitis vinifera]
          Length = 294

 Score =  169 bits (429), Expect = 4e-40
 Identities = 86/171 (50%), Positives = 118/171 (69%)
 Frame = -2

Query: 726 RSVRRLRSELPSVNQHSRPLPWRRSFRQSRFNRKEEIEERVLRWRASIYNRRLQAVPLPS 547
           R +RR   E  S ++ +RPLPWRRSF +      + + ER+L+WRASIY++ +QAVP   
Sbjct: 124 RVLRRYWDESNSDSRRTRPLPWRRSFGRPGSLPSDVVAERILQWRASIYSQGMQAVPFSP 183

Query: 546 KNLPEQDTSRSSIFKERMQCRIKPWIQRELRAILQDPDPSVIVHLATSLYMLSLEEKLKA 367
           +N  +Q+ S +S  KER+  RI+PWIQREL AIL DPD +VIVH+ATSL++ SLEE    
Sbjct: 184 RNRLKQNISGNSSAKERILQRIEPWIQRELHAILHDPDAAVIVHVATSLFVSSLEENTPL 243

Query: 366 SSEHVDLEDKFVRQLRPFLQDHTNLFWHELRCFSESAFEMATYDSIVEYKP 214
              ++  ED F+  LR FL + TN FWHEL CF++S F M TYD++V+Y+P
Sbjct: 244 G--YLGGEDDFLAPLRSFLHNQTNTFWHELSCFADSTFNMETYDAVVKYEP 292


>ref|NP_850310.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|17473924|gb|AAL38373.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|20148385|gb|AAM10083.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|330254541|gb|AEC09635.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 296

 Score =  147 bits (371), Expect = 2e-33
 Identities = 80/174 (45%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
 Frame = -2

Query: 726 RSVRRLRSELPSVNQHSRPLPWRRSFRQSRFNRKEEIEERVLRWRASIYNRRLQAVPLPS 547
           R ++R R  L + +  SRPLPWRRSF +        I +R L+WRASIY ++L+AV L S
Sbjct: 124 RIIQRSRDVLENSSSRSRPLPWRRSFGRPGSVPDSVIFQRKLQWRASIYTKQLRAVRLHS 183

Query: 546 KNLPEQDTSRSSIFKERMQCRIKPWIQRELRAILQDPDPSVIVHLATSLYMLSLE-EKLK 370
           + L E   + +   K ++  RI+PWI+REL+A+L DPDPSVIVH A++L++  LE E  +
Sbjct: 184 RRL-ELSLAVNDYTKAKITERIEPWIRRELQAVLGDPDPSVIVHFASALFIKRLERENNR 242

Query: 369 ASSEHVDLEDKFVRQLRPFLQDHTNLFWHELRCFSESAFEMATYDSIVEYKPLE 208
            + +   L +  V  LR FL D  ++FWHELRCF+ES   M TYD++VEY  +E
Sbjct: 243 QTGQTGMLVEDEVSSLRKFLSDKVDIFWHELRCFAESILTMETYDAVVEYNEVE 296