BLASTX nr result

ID: Coptis21_contig00009259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009259
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304256.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002265217.1| PREDICTED: pectinesterase 3 [Vitis vinifera]      119   2e-25
ref|XP_002532945.1| Pectinesterase-3 precursor, putative [Ricinu...   115   4e-24
gb|ABK93625.1| unknown [Populus trichocarpa]                          102   3e-20
ref|XP_002298054.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20

>ref|XP_002304256.1| predicted protein [Populus trichocarpa] gi|222841688|gb|EEE79235.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/111 (49%), Positives = 84/111 (75%)
 Frame = +2

Query: 5   TIKGICSVTQYPESCISSLSSVQDSNKITDPEQLFKLSMQIAINEISRISSLPDQFISNL 184
           ++K +CSVTQYP SC SS+S+++  N  TDPE LFKLS+++A+NE+S++   PD+ I ++
Sbjct: 74  SLKAVCSVTQYPASCFSSISALETGNT-TDPEVLFKLSLRVAMNELSKLKDYPDKLIQSI 132

Query: 185 NDTLAEAALRNCKEMFDDSIDQLNTSISSMTVGGGESLSSRQAQIDDIKTW 337
            DT  + AL+ C  +FDD++D+LN SISSM +G GE + S  A+++D+KTW
Sbjct: 133 KDTTLQGALKVCATVFDDAVDRLNDSISSMAIGEGEQILS-PAKMNDLKTW 182


>ref|XP_002265217.1| PREDICTED: pectinesterase 3 [Vitis vinifera]
          Length = 578

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/111 (54%), Positives = 85/111 (76%)
 Frame = +2

Query: 5   TIKGICSVTQYPESCISSLSSVQDSNKITDPEQLFKLSMQIAINEISRISSLPDQFISNL 184
           +IK +CSVTQYP+SC+SS+SS+  SN  TDPE+LF+L++++AI E+S++SSLP Q  +  
Sbjct: 72  SIKAVCSVTQYPDSCVSSISSLDTSNT-TDPEELFRLTLRVAIAELSKLSSLPRQLSAKS 130

Query: 185 NDTLAEAALRNCKEMFDDSIDQLNTSISSMTVGGGESLSSRQAQIDDIKTW 337
           ND   + AL  C+ +F+D+ID+LN SISSM V  GE L S  ++IDDIKTW
Sbjct: 131 NDAQLKKALGVCETVFEDAIDRLNDSISSMEVREGEKLLS-ASKIDDIKTW 180


>ref|XP_002532945.1| Pectinesterase-3 precursor, putative [Ricinus communis]
           gi|223527274|gb|EEF29429.1| Pectinesterase-3 precursor,
           putative [Ricinus communis]
          Length = 589

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/112 (51%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
 Frame = +2

Query: 5   TIKGICSVTQYPESCISSLSSVQDSNKITDPEQLFKLSMQIAINEISRISSLPDQFISNL 184
           ++K +CSVTQ+P SC SS+SS++ +N  +DPE LFKLS+ + INE+S+I   P + I N 
Sbjct: 74  SLKAVCSVTQFPSSCFSSISSLETANT-SDPEVLFKLSLHVVINELSKIKDYPSKLIQNS 132

Query: 185 N-DTLAEAALRNCKEMFDDSIDQLNTSISSMTVGGGESLSSRQAQIDDIKTW 337
           N D   +AAL  C+ +FDD+ D LN SISSMTVG GE++ S  ++I+D+KTW
Sbjct: 133 NLDATVKAALNVCESVFDDAFDMLNDSISSMTVGEGETILS-PSKINDMKTW 183


>gb|ABK93625.1| unknown [Populus trichocarpa]
          Length = 240

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/112 (45%), Positives = 80/112 (71%)
 Frame = +2

Query: 2   QTIKGICSVTQYPESCISSLSSVQDSNKITDPEQLFKLSMQIAINEISRISSLPDQFISN 181
           ++IK +C VT YP SC +S+SS+  S K  DPE +FKLS+Q++I E+  +SSL    +S+
Sbjct: 76  ESIKTVCDVTLYPSSCFTSISSLNTSTK-PDPEVIFKLSLQVSIAELKNLSSL----LSS 130

Query: 182 LNDTLAEAALRNCKEMFDDSIDQLNTSISSMTVGGGESLSSRQAQIDDIKTW 337
            ND  ++AAL++C   FDDS+ +LN S+S+M VG GE + + + +++DI+TW
Sbjct: 131 FNDVNSQAALKDCVSQFDDSLSKLNDSLSAMEVGPGEKMLNLE-KVNDIRTW 181


>ref|XP_002298054.1| predicted protein [Populus trichocarpa] gi|222845312|gb|EEE82859.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  101 bits (252), Expect = 5e-20
 Identities = 51/112 (45%), Positives = 80/112 (71%)
 Frame = +2

Query: 2   QTIKGICSVTQYPESCISSLSSVQDSNKITDPEQLFKLSMQIAINEISRISSLPDQFISN 181
           ++IK +C VT YP SC +S+SS+  S K  DPE +FKLS+Q++I E+  +SSL    +S+
Sbjct: 76  ESIKTVCDVTLYPSSCFTSISSLNISTK-PDPEVIFKLSLQVSIAELKNLSSL----LSS 130

Query: 182 LNDTLAEAALRNCKEMFDDSIDQLNTSISSMTVGGGESLSSRQAQIDDIKTW 337
            ND  ++AAL++C   FDDS+ +LN S+S+M VG GE + + + +++DI+TW
Sbjct: 131 FNDVNSQAALKDCVSQFDDSLSKLNDSLSAMEVGPGEKMLNLE-KVNDIRTW 181


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