BLASTX nr result

ID: Coptis21_contig00009256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009256
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316258.1| predicted protein [Populus trichocarpa] gi|2...   283   7e-74
ref|XP_002311191.1| predicted protein [Populus trichocarpa] gi|2...   270   6e-70
ref|XP_002524235.1| conserved hypothetical protein [Ricinus comm...   262   2e-67
ref|NP_001046127.1| Os02g0187200 [Oryza sativa Japonica Group] g...   166   9e-39
ref|XP_003570946.1| PREDICTED: probable glycosyltransferase At5g...   164   5e-38

>ref|XP_002316258.1| predicted protein [Populus trichocarpa] gi|222865298|gb|EEF02429.1|
            predicted protein [Populus trichocarpa]
          Length = 339

 Score =  283 bits (724), Expect = 7e-74
 Identities = 145/315 (46%), Positives = 201/315 (63%), Gaps = 4/315 (1%)
 Frame = -2

Query: 1184 QKMVQTFKIFIYPSQVNKYFITTIEANFHSSLLESTFITTNPKEAHLFYLHIPPNXXXXX 1005
            Q M+ +FKI+IY       F +  E+NF + L  S F+T NP+EAHL+++    N     
Sbjct: 38   QNMLISFKIYIYTPPNALSFSSPTESNFFTCLQNSPFVTQNPEEAHLYFVPFSSNLSTRS 97

Query: 1004 XXXXXKEVQTLFPFWNQTLGADHFYISCEGVGYESERSLVELKKNSIQITCFPSPQNRYI 825
                 ++++  FP+WN+TLGADHFY+SC G+GYES+R+LVELKKNS+QI+CFP+ + R++
Sbjct: 98   VARFIRDLRMEFPYWNRTLGADHFYVSCAGLGYESDRNLVELKKNSVQISCFPTTEGRFV 157

Query: 824  PHKDITLPHLRIGDELRLAENIKFLGYVGYLNDMNSKIESSSFIKELSLDPDFQLDLEPF 645
            PHKDIT P    G+        K+LG+V Y     ++++ S+ + EL  D DF ++ EP 
Sbjct: 158  PHKDITFPPHAQGN-----RTAKYLGFVRY-----NEVKESNLVNELRKDSDFLIESEP- 206

Query: 644  TDDGGELLV----NSKFCLFFYNMSVSIASVSEGLRIGCVPVVISDGAVIDLPFMDVLNW 477
                G  LV    +S FCLF Y   VS   + E LR GCVPV++ D  + DLP MDV+ W
Sbjct: 207  --SNGMTLVGRLGSSVFCLFEYGADVS--GIGEALRFGCVPVMVMDRPMQDLPLMDVIGW 262

Query: 476  KDIVLFVGTSGGVKEVKKVLQGILWSDKYQKMREMGMVASKHFDWYPSPKPNDAFHTVLY 297
            + I +FVG+ GGVKEVK+ L      D+    R +G+VAS+HF W   P+P D+FH V+Y
Sbjct: 263  QKIAIFVGSRGGVKEVKRELDRTCKDDECAGRRRLGVVASQHFVWNHMPQPYDSFHMVMY 322

Query: 296  QLWIRRHVIRYARRE 252
            QLW+RRH IRYARRE
Sbjct: 323  QLWLRRHAIRYARRE 337


>ref|XP_002311191.1| predicted protein [Populus trichocarpa] gi|222851011|gb|EEE88558.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  270 bits (690), Expect = 6e-70
 Identities = 137/312 (43%), Positives = 197/312 (63%), Gaps = 1/312 (0%)
 Frame = -2

Query: 1184 QKMVQTFKIFIYPSQVNKYFITTIEANFHSSLLESTFITTNPKEAHLFYLHIPPNXXXXX 1005
            Q M+ +FKI+IY       F +  E+ F +SL  S F+T NP+EAHLF++    N     
Sbjct: 38   QNMLNSFKIYIYTPSKPFSFSSPTESLFFTSLQASPFVTQNPEEAHLFFVPFASNLSTRS 97

Query: 1004 XXXXXKEVQTLFPFWNQTLGADHFYISCEGVGYESERSLVELKKNSIQITCFPSPQNRYI 825
                 ++++  FP+WN+TLGADHFY+SC G+GYES+R+LVELKKNS+QI+CFP P+ +++
Sbjct: 98   IARFIRDLRMEFPYWNRTLGADHFYVSCAGLGYESDRNLVELKKNSVQISCFPVPEGKFV 157

Query: 824  PHKDITLPHLRIGDELRLAENIKFLGYVGYLNDMNSKIESSSFIKELSLDPDFQLDLEPF 645
            PHKDI+LP L        A   + + Y+      +  ++ S    EL  D DF ++ EP 
Sbjct: 158  PHKDISLPPLARITRASHAPGNRTVRYL----VRHGGVKDSKLANELRNDSDFLMESEPS 213

Query: 644  TD-DGGELLVNSKFCLFFYNMSVSIASVSEGLRIGCVPVVISDGAVIDLPFMDVLNWKDI 468
             +    E L +S FCLF       I+ + E LR GCVPV+++D  + DLP MDVL+W+ I
Sbjct: 214  NEMTLVERLGSSMFCLF--EDGADISGIGEALRFGCVPVMVTDRPMQDLPLMDVLSWQKI 271

Query: 467  VLFVGTSGGVKEVKKVLQGILWSDKYQKMREMGMVASKHFDWYPSPKPNDAFHTVLYQLW 288
             +FVG+ GG+KE+K+VL      D+ +  R +G+ AS+HF W   P+P D+F+ V+YQLW
Sbjct: 272  AVFVGSGGGIKEMKRVLDRTCKDDECEGTRRLGVAASQHFGWNEIPQPYDSFYMVVYQLW 331

Query: 287  IRRHVIRYARRE 252
            +RRH IRY RRE
Sbjct: 332  LRRHTIRYPRRE 343


>ref|XP_002524235.1| conserved hypothetical protein [Ricinus communis]
            gi|223536512|gb|EEF38159.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 337

 Score =  262 bits (669), Expect = 2e-67
 Identities = 139/315 (44%), Positives = 201/315 (63%), Gaps = 4/315 (1%)
 Frame = -2

Query: 1184 QKMVQTFKIFIYPSQVNKYFITTIEANFHSSLLESTFITTNPKEAHLFYLHIPPNXXXXX 1005
            Q+M+Q+FKI+ Y       F + +E+ F +SL  S FIT NP++AHLF++  P +     
Sbjct: 40   QRMLQSFKIYTYTPPQPFSFTSPVESLFFTSLQNSHFITLNPEQAHLFFIPFPSDLSPRS 99

Query: 1004 XXXXXKEVQTLFPFWNQTLGADHFYISCEGVGYESERSLVELKKNSIQITCFPSPQNRYI 825
                 ++++T FP+WN+TLGADHFYISC G+GYES+R+LVELKKNS+QI+CFPSP  +++
Sbjct: 100  LARVIRDLRTEFPYWNRTLGADHFYISCTGLGYESDRNLVELKKNSVQISCFPSPNGKFV 159

Query: 824  PHKDITLPHLRIGDELRLAENIK--FLGYVGYLNDMNSKIESSSFIKELSLDPDFQLDLE 651
            PHKDITLP L +   +  + N +  +  +V Y             ++EL  D +  ++ +
Sbjct: 160  PHKDITLPPL-VPSTIHKSSNKRRPYKAFVKY-----------DGVEELRGDLEVLIESQ 207

Query: 650  PFTDDGGELLVNSKFCLFFYNMSVSIASVSEGLRIGCVPVVISDGAVIDLPFMDVLNWKD 471
            P  +        S+FCLF Y  + +I+ + E L  GCVP+VI++  + DLP MDVL W++
Sbjct: 208  PSDEK-----TRSEFCLFDY--AANISGIGEALSSGCVPLVITERPIQDLPLMDVLRWQE 260

Query: 470  IVLFVGTS-GGVKEVKKVLQGIL-WSDKYQKMREMGMVASKHFDWYPSPKPNDAFHTVLY 297
            I + VG+S  G K VK+VL G     D  ++MR +G  AS+H  W  +P+P DAFH V+Y
Sbjct: 261  IAVIVGSSDDGFKWVKRVLNGTCSRGDTCERMRRLGAGASQHLVWNETPEPYDAFHMVMY 320

Query: 296  QLWIRRHVIRYARRE 252
            QLW+RRH IRYARRE
Sbjct: 321  QLWLRRHTIRYARRE 335


>ref|NP_001046127.1| Os02g0187200 [Oryza sativa Japonica Group]
            gi|46390046|dbj|BAD15422.1| putative
            pectin-glucuronyltransferase [Oryza sativa Japonica
            Group] gi|46390077|dbj|BAD15452.1| putative
            pectin-glucuronyltransferase [Oryza sativa Japonica
            Group] gi|113535658|dbj|BAF08041.1| Os02g0187200 [Oryza
            sativa Japonica Group] gi|215694561|dbj|BAG89554.1|
            unnamed protein product [Oryza sativa Japonica Group]
          Length = 402

 Score =  166 bits (421), Expect = 9e-39
 Identities = 108/336 (32%), Positives = 172/336 (51%), Gaps = 30/336 (8%)
 Frame = -2

Query: 1181 KMVQTFKIFIYPSQVNKYFITT---------IEANFHSSLLESTFITTNPKEAHLFYLHI 1029
            +M ++FK+++YP    K F  T          E  F  ++ ES F T +P +AHLF++ I
Sbjct: 76   EMERSFKVYMYPDGDPKTFYQTPRKLTGKYASEGYFFQNIRESRFRTGDPDKAHLFFVPI 135

Query: 1028 PPNXXXXXXXXXXKEVQTL------------FPFWNQTLGADHFYISCEGVGYESERSLV 885
             P+           E  T+            +P+WN+TLGADHF+++C  VG  +   L 
Sbjct: 136  SPHKMRGKGTSY--ENMTIIVKDYVEGLINKYPYWNRTLGADHFFVTCHDVGVRAFEGLP 193

Query: 884  ELKKNSIQITCFPSPQNRYIPHKDITLPHL----RIGDELRLAENIKFLGYVGYLNDMNS 717
             + KNSI++ C PS    +IPHKDI LP +     + +     EN   LG+  +    NS
Sbjct: 194  FMVKNSIRVVCSPSYNVDFIPHKDIALPQVLQPFALPEGGNDVENRTILGF--WAGHRNS 251

Query: 716  KIESSSFIKELSLDPDFQLDLEPFTDDGGELL-----VNSKFCLFFYNMSVSIASVSEGL 552
            KI      +    D +  +     +   GEL+      ++KFC+      V+ A +S+ +
Sbjct: 252  KIR-VILAQVWENDTELAISNNRISRAIGELVYQKQFYHTKFCICPGGSQVNSARISDSI 310

Query: 551  RIGCVPVVISDGAVIDLPFMDVLNWKDIVLFVGTSGGVKEVKKVLQGILWSDKYQKMREM 372
              GCVPV++SD    DLPF D+L+W+   + V     V ++K +L+ I   +++ ++ + 
Sbjct: 311  HYGCVPVILSD--YYDLPFNDILDWRKFAV-VLKERDVYQLKSILKSIS-QEEFVELHKS 366

Query: 371  GMVASKHFDWYPSPKPNDAFHTVLYQLWIRRHVIRY 264
             +   KHF W+  P P DAFH V+Y+LW+R HVI+Y
Sbjct: 367  LVQVQKHFVWHSPPLPYDAFHMVMYELWLRHHVIKY 402


>ref|XP_003570946.1| PREDICTED: probable glycosyltransferase At5g11130-like [Brachypodium
            distachyon]
          Length = 405

 Score =  164 bits (415), Expect = 5e-38
 Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 33/339 (9%)
 Frame = -2

Query: 1181 KMVQTFKIFIYPSQVNKYFITT---------IEANFHSSLLESTFITTNPKEAHLFYLHI 1029
            +M ++FK++IYP    K F  T          E  F  ++ ES F T +P  A LF++ I
Sbjct: 79   EMERSFKVYIYPDGDPKTFYQTPRKLTGKYASEGYFFQNIRESRFRTEDPDSADLFFVPI 138

Query: 1028 PPNXXXXXXXXXXKEVQTL------------FPFWNQTLGADHFYISCEGVGYESERSLV 885
             P+           E  T+            +P+WN+TLGADHF+++C  VG  +   L 
Sbjct: 139  SPHKMRGKGTSY--ENMTIIVKDYVEGLINKYPYWNRTLGADHFFVTCHDVGVRAFEGLP 196

Query: 884  ELKKNSIQITCFPSPQNRYIPHKDITLPHL-------RIGDELRLAENIKFLGYVGYLND 726
             + KNSI++ C PS    +IPHKD+ LP +       + G+++    N+ F     +   
Sbjct: 197  FMVKNSIRVVCSPSYNVDFIPHKDVALPQVLQPFALPKGGNDVENRTNLGF-----WAGH 251

Query: 725  MNSKIESSSFIKELSLDPDFQLDLEPFTDDGGELL-----VNSKFCLFFYNMSVSIASVS 561
             NSKI      +    D +  +     +   GEL+       +KFC+      V+ A +S
Sbjct: 252  RNSKIR-VILARVWENDTELAISNNRISRAIGELVYQKQFYRTKFCICPGGSQVNSARIS 310

Query: 560  EGLRIGCVPVVISDGAVIDLPFMDVLNWKDIVLFVGTSGGVKEVKKVLQGILWSDKYQKM 381
            + +  GCVPV++SD    DLPF DVL+WK   + V     V E+K +L+ I   +++  +
Sbjct: 311  DSIHYGCVPVILSD--YYDLPFNDVLDWKKFAI-VLKERDVYELKSILKSIS-QEEFVAL 366

Query: 380  REMGMVASKHFDWYPSPKPNDAFHTVLYQLWIRRHVIRY 264
                +   KHF W+  P P DAFH V+Y+LW+R HVI+Y
Sbjct: 367  HNSLVQIQKHFVWHSPPIPYDAFHMVMYELWLRHHVIKY 405


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