BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009254
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_10246640.1| hypothetical protein NITHO_6470001 [Nitrolanc...    59   4e-07
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]              59   4e-07
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                 57   2e-06
gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsi...    56   3e-06
gb|ABA27027.1| TO70-3 [Taraxacum officinale]                           55   6e-06

>ref|ZP_10246640.1| hypothetical protein NITHO_6470001 [Nitrolancetus hollandicus Lb]
           gi|390170603|emb|CCF85985.1| hypothetical protein
           NITHO_6470001 [Nitrolancetus hollandicus Lb]
          Length = 60

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = -2

Query: 375 KEEKDGKLGPNWEGPYEVVDVGGSGTYRLRTMEGKRLERSWNVRLLMKFHV 223
           KEE  GKLG NWEGPY V +V  +G Y+L+ +E + ++R WNV  L KF+V
Sbjct: 10  KEEGAGKLGINWEGPYIVTEVVRNGVYKLKDLEDRPVKRPWNVINLKKFYV 60


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/51 (52%), Positives = 35/51 (68%)
 Frame = -2

Query: 375  KEEKDGKLGPNWEGPYEVVDVGGSGTYRLRTMEGKRLERSWNVRLLMKFHV 223
            KEE  GKLG NWEGPY + +V  +G YRL+ +E   ++R WNV  L KF+V
Sbjct: 1053 KEEGAGKLGINWEGPYIITEVVRNGVYRLKDLEDNPVKRPWNVINLKKFYV 1103


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 22/45 (48%), Positives = 30/45 (66%)
 Frame = -2

Query: 360  GKLGPNWEGPYEVVDVGGSGTYRLRTMEGKRLERSWNVRLLMKFH 226
            GKLG NWEGPY +  V G G YRL  ++G+ + R WNV  L +++
Sbjct: 1061 GKLGTNWEGPYRITSVAGIGAYRLEDLDGRVVHRPWNVNNLRRYY 1105


>gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1329

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/50 (48%), Positives = 34/50 (68%)
 Frame = -2

Query: 372  EEKDGKLGPNWEGPYEVVDVGGSGTYRLRTMEGKRLERSWNVRLLMKFHV 223
            E+  GKLG +WEGPY++  V  +G YRL  MEGK + R+WN   L +F++
Sbjct: 1280 EKGAGKLGISWEGPYKITHVVRNGVYRLINMEGKTVRRAWNSMHLKRFYI 1329


>gb|ABA27027.1| TO70-3 [Taraxacum officinale]
          Length = 97

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/44 (54%), Positives = 27/44 (61%)
 Frame = -2

Query: 381 STKEEKDGKLGPNWEGPYEVVDVGGSGTYRLRTMEGKRLERSWN 250
           +TK+  DGKL P WEGPY +    G G Y L  MEG  L RSWN
Sbjct: 50  NTKDPADGKLAPKWEGPYVINSKAGKGVYWLADMEGTLLPRSWN 93