BLASTX nr result

ID: Coptis21_contig00009251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009251
         (1390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279592.2| PREDICTED: GPN-loop GTPase 1 homolog [Vitis ...   462   e-128
emb|CBI22859.3| unnamed protein product [Vitis vinifera]              462   e-128
emb|CAN71805.1| hypothetical protein VITISV_029075 [Vitis vinifera]   462   e-128
ref|XP_002312316.1| predicted protein [Populus trichocarpa] gi|2...   459   e-126
ref|XP_002512187.1| xpa-binding protein, putative [Ricinus commu...   457   e-126

>ref|XP_002279592.2| PREDICTED: GPN-loop GTPase 1 homolog [Vitis vinifera]
          Length = 435

 Score =  462 bits (1190), Expect = e-128
 Identities = 231/294 (78%), Positives = 252/294 (85%)
 Frame = +2

Query: 68  LCVFLLGCGKTTFLHRLVCHTQASNIRGYVVNLDPAVMTLPFGSNIDIRDTVRYKEVMKE 247
           + V + G GKTTFLHRLVCHTQASNIRGYV+NLDPAV+TLPFG+NIDIRDTVRYKEVMK+
Sbjct: 71  IVVGMAGSGKTTFLHRLVCHTQASNIRGYVINLDPAVLTLPFGANIDIRDTVRYKEVMKQ 130

Query: 248 FNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGSIITEA 427
           FNLGPNGGILTSLNLFATKFDEV+S+IEKRADQLDYVLVDTPGQIEIFTWSASG+IITEA
Sbjct: 131 FNLGPNGGILTSLNLFATKFDEVVSMIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEA 190

Query: 428 FASTFPTVVAYVVDTPRSASPVTFMSNMLYACSILYKTRLPMILTFNKTDVAQHQFALEW 607
           FASTFPTV+ YVVDTPRSASPVTFMSNMLYACSILYKTRLP++L FNK DVAQHQFALEW
Sbjct: 191 FASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNKVDVAQHQFALEW 250

Query: 608 MEDFEVFHAALEXXXXXXXXXXXXXXXVLDEFYKNLHSVGVSAVSGAGMDAFFKAIESSS 787
           MEDFEVFHAAL+               VLDEFYKNL SVGVSAVSGAGM+ FFKAIE+S+
Sbjct: 251 MEDFEVFHAALDSDHSYTSTLTRSLSLVLDEFYKNLQSVGVSAVSGAGMEEFFKAIEASA 310

Query: 788 DEYMETYKADLDXXXXXXXXXXXXXXXXNMEKLRKDMEKSNGETVVLSTGLKDK 949
           +EYM +YKADLD                NM++LRKDMEKS GET+VLSTGLKDK
Sbjct: 311 EEYMTSYKADLDKRRAEKQRLEEERMRENMDRLRKDMEKSGGETMVLSTGLKDK 364


>emb|CBI22859.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  462 bits (1190), Expect = e-128
 Identities = 231/294 (78%), Positives = 252/294 (85%)
 Frame = +2

Query: 68  LCVFLLGCGKTTFLHRLVCHTQASNIRGYVVNLDPAVMTLPFGSNIDIRDTVRYKEVMKE 247
           + V + G GKTTFLHRLVCHTQASNIRGYV+NLDPAV+TLPFG+NIDIRDTVRYKEVMK+
Sbjct: 71  IVVGMAGSGKTTFLHRLVCHTQASNIRGYVINLDPAVLTLPFGANIDIRDTVRYKEVMKQ 130

Query: 248 FNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGSIITEA 427
           FNLGPNGGILTSLNLFATKFDEV+S+IEKRADQLDYVLVDTPGQIEIFTWSASG+IITEA
Sbjct: 131 FNLGPNGGILTSLNLFATKFDEVVSMIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEA 190

Query: 428 FASTFPTVVAYVVDTPRSASPVTFMSNMLYACSILYKTRLPMILTFNKTDVAQHQFALEW 607
           FASTFPTV+ YVVDTPRSASPVTFMSNMLYACSILYKTRLP++L FNK DVAQHQFALEW
Sbjct: 191 FASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNKVDVAQHQFALEW 250

Query: 608 MEDFEVFHAALEXXXXXXXXXXXXXXXVLDEFYKNLHSVGVSAVSGAGMDAFFKAIESSS 787
           MEDFEVFHAAL+               VLDEFYKNL SVGVSAVSGAGM+ FFKAIE+S+
Sbjct: 251 MEDFEVFHAALDSDHSYTSTLTRSLSLVLDEFYKNLQSVGVSAVSGAGMEEFFKAIEASA 310

Query: 788 DEYMETYKADLDXXXXXXXXXXXXXXXXNMEKLRKDMEKSNGETVVLSTGLKDK 949
           +EYM +YKADLD                NM++LRKDMEKS GET+VLSTGLKDK
Sbjct: 311 EEYMTSYKADLDKRRAEKQRLEEERMRENMDRLRKDMEKSGGETMVLSTGLKDK 364


>emb|CAN71805.1| hypothetical protein VITISV_029075 [Vitis vinifera]
          Length = 414

 Score =  462 bits (1190), Expect = e-128
 Identities = 231/294 (78%), Positives = 252/294 (85%)
 Frame = +2

Query: 68  LCVFLLGCGKTTFLHRLVCHTQASNIRGYVVNLDPAVMTLPFGSNIDIRDTVRYKEVMKE 247
           + V + G GKTTFLHRLVCHTQASNIRGYV+NLDPAV+TLPFG+NIDIRDTVRYKEVMK+
Sbjct: 71  IVVGMAGSGKTTFLHRLVCHTQASNIRGYVINLDPAVLTLPFGANIDIRDTVRYKEVMKQ 130

Query: 248 FNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGSIITEA 427
           FNLGPNGGILTSLNLFATKFDEV+S+IEKRADQLDYVLVDTPGQIEIFTWSASG+IITEA
Sbjct: 131 FNLGPNGGILTSLNLFATKFDEVVSMIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEA 190

Query: 428 FASTFPTVVAYVVDTPRSASPVTFMSNMLYACSILYKTRLPMILTFNKTDVAQHQFALEW 607
           FASTFPTV+ YVVDTPRSASPVTFMSNMLYACSILYKTRLP++L FNK DVAQHQFALEW
Sbjct: 191 FASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNKVDVAQHQFALEW 250

Query: 608 MEDFEVFHAALEXXXXXXXXXXXXXXXVLDEFYKNLHSVGVSAVSGAGMDAFFKAIESSS 787
           MEDFEVFHAAL+               VLDEFYKNL SVGVSAVSGAGM+ FFKAIE+S+
Sbjct: 251 MEDFEVFHAALDSDHSYTSTLTRSLSLVLDEFYKNLQSVGVSAVSGAGMEEFFKAIEASA 310

Query: 788 DEYMETYKADLDXXXXXXXXXXXXXXXXNMEKLRKDMEKSNGETVVLSTGLKDK 949
           +EYM +YKADLD                NM++LRKDMEKS GET+VLSTGLKDK
Sbjct: 311 EEYMTSYKADLDKRRAEKQRLEEERMRENMDRLRKDMEKSGGETMVLSTGLKDK 364


>ref|XP_002312316.1| predicted protein [Populus trichocarpa] gi|222852136|gb|EEE89683.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  459 bits (1180), Expect = e-126
 Identities = 231/294 (78%), Positives = 249/294 (84%)
 Frame = +2

Query: 68  LCVFLLGCGKTTFLHRLVCHTQASNIRGYVVNLDPAVMTLPFGSNIDIRDTVRYKEVMKE 247
           + V + G GKTTFLHRLVCHTQAS IRGYV+NLDPAVMTLP+G+NIDIRDTV+YKEVMK+
Sbjct: 67  IVVGMAGSGKTTFLHRLVCHTQASRIRGYVLNLDPAVMTLPYGANIDIRDTVKYKEVMKQ 126

Query: 248 FNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGSIITEA 427
           FNLGPNGGILTSLNLFATKFDEVI VIEKRADQLDYVLVDTPGQIEIFTWSASG+IITEA
Sbjct: 127 FNLGPNGGILTSLNLFATKFDEVIQVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEA 186

Query: 428 FASTFPTVVAYVVDTPRSASPVTFMSNMLYACSILYKTRLPMILTFNKTDVAQHQFALEW 607
           FASTFPTVVAYVVDTPRS+SPVTFMSNMLYACSILYKTRLP++L FNKTDVAQHQFA+EW
Sbjct: 187 FASTFPTVVAYVVDTPRSSSPVTFMSNMLYACSILYKTRLPLVLVFNKTDVAQHQFAIEW 246

Query: 608 MEDFEVFHAALEXXXXXXXXXXXXXXXVLDEFYKNLHSVGVSAVSGAGMDAFFKAIESSS 787
           MEDFE F  A+                VLDEFYKNL SVGVSAVSGAGMDAFFKAIE+S+
Sbjct: 247 MEDFEAFQGAMRSDDSYMSTFSQSLSLVLDEFYKNLRSVGVSAVSGAGMDAFFKAIEASA 306

Query: 788 DEYMETYKADLDXXXXXXXXXXXXXXXXNMEKLRKDMEKSNGETVVLSTGLKDK 949
           +EYMETYKADLD                NMEKLRKDME S G++VVLSTGLKDK
Sbjct: 307 EEYMETYKADLDKRRVEKQRLEEEQQKQNMEKLRKDMENSGGQSVVLSTGLKDK 360


>ref|XP_002512187.1| xpa-binding protein, putative [Ricinus communis]
           gi|223548731|gb|EEF50221.1| xpa-binding protein,
           putative [Ricinus communis]
          Length = 407

 Score =  457 bits (1175), Expect = e-126
 Identities = 229/295 (77%), Positives = 252/295 (85%)
 Frame = +2

Query: 68  LCVFLLGCGKTTFLHRLVCHTQASNIRGYVVNLDPAVMTLPFGSNIDIRDTVRYKEVMKE 247
           + V + G GKTTFLHRL+ HTQA+NIRGYV+NLDPAVMTLPFG+NIDIRDTVRYKEVMK+
Sbjct: 67  IVVGMAGSGKTTFLHRLISHTQATNIRGYVLNLDPAVMTLPFGANIDIRDTVRYKEVMKQ 126

Query: 248 FNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGSIITEA 427
           FNLGPNGGILTSLNLFATKFDEV+SVIEKRA+QLDYVLVDTPGQIEIFTWSASG+IITEA
Sbjct: 127 FNLGPNGGILTSLNLFATKFDEVVSVIEKRANQLDYVLVDTPGQIEIFTWSASGAIITEA 186

Query: 428 FASTFPTVVAYVVDTPRSASPVTFMSNMLYACSILYKTRLPMILTFNKTDVAQHQFALEW 607
           FASTFPTV+AYVVDTPRS+SP TFMSNMLYACSILYKTRLP++L FNKTDVAQHQFALEW
Sbjct: 187 FASTFPTVIAYVVDTPRSSSPTTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHQFALEW 246

Query: 608 MEDFEVFHAALEXXXXXXXXXXXXXXXVLDEFYKNLHSVGVSAVSGAGMDAFFKAIESSS 787
           MEDFE F AA+                VLDEFYKNL SVGVSAVSGAGM+AFFKA+E+S+
Sbjct: 247 MEDFEAFQAAVSSDHSYSSTLTQSLSLVLDEFYKNLKSVGVSAVSGAGMEAFFKAVEASA 306

Query: 788 DEYMETYKADLDXXXXXXXXXXXXXXXXNMEKLRKDMEKSNGETVVLSTGLKDKE 952
           +EYMETYKA+LD                +ME+LRKDMEKS GETVVLSTGLKDKE
Sbjct: 307 EEYMETYKAELDKRREEKQRLEDERRRESMERLRKDMEKSKGETVVLSTGLKDKE 361


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