BLASTX nr result

ID: Coptis21_contig00009219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009219
         (1966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284247.1| PREDICTED: uncharacterized protein LOC100250...   208   4e-51
ref|XP_002331165.1| predicted protein [Populus trichocarpa] gi|2...   196   1e-47
ref|XP_003534205.1| PREDICTED: uncharacterized protein LOC100799...   188   5e-45
ref|XP_003529991.1| PREDICTED: uncharacterized protein LOC100817...   175   3e-41
ref|XP_003620625.1| Zinc finger Ran-binding domain-containing pr...   170   1e-39

>ref|XP_002284247.1| PREDICTED: uncharacterized protein LOC100250827 [Vitis vinifera]
          Length = 360

 Score =  208 bits (530), Expect = 4e-51
 Identities = 137/322 (42%), Positives = 158/322 (49%), Gaps = 9/322 (2%)
 Frame = -3

Query: 1280 RPDFDGSIDQHVMRAGSVSPLHQRKLDDRYRSDFDTXXXXXXXXXXXXXXXXXXXXXXXX 1101
            R D  G    + +RAGS SP+ +R  D RY S+FD                         
Sbjct: 50   RSDRFGDGPGYRIRAGSSSPVRRRNPDHRYNSEFDHSGGLPRSRGFGSERDPGRYRNHSP 109

Query: 1100 XXXXXXXXXXXXXRDFNVRGFGRGSFRNDGMTRNSANVAPRDGDWVCPALSCGNLNFARR 921
                         R  +  GFG G  R++G+ RN+ NV PR+GDWVCP   CGNLNFARR
Sbjct: 110  PYGRGRGGGRSFGRGLDGPGFGPGPIRSEGI-RNNPNVRPREGDWVCPDPLCGNLNFARR 168

Query: 920  EYCNKCNRPRLGAGGSPRRNYLGPP-------RFSGPPLDRSPVRGGLNXXXXXXXXXXX 762
            E CN CNR R G G SPRR + GPP       RFSGPP+DRSP  G              
Sbjct: 169  EQCNNCNRYREGPGESPRRGFPGPPPPHPPPRRFSGPPMDRSP--GRTMNGYRSPPRGWA 226

Query: 761  XXXXREFRDG-PPHIRHGGRFPDPHIRRDRQEYPXXXXXXXXXXXRPVPPDWXXXXXXXX 585
                REF  G P H RH GRFPD ++RRDR +YP           RP PPDW        
Sbjct: 227  RDGPREFGGGAPSHRRHDGRFPDHNMRRDRLDYPEDDYRERNKFDRPAPPDWGHRDRGRD 286

Query: 584  XXXXXXRAYDARNERRPLSPPPQALPSRVPSRDRWAHQVRERSRSPMMGG-PLKDQRQDS 408
                  R      ERRP SPPP  L    P R RW   VR RSRSP+ GG PLKD R+D 
Sbjct: 287  SFFNNER---KGYERRPPSPPPPPL----PPRGRWGRDVRARSRSPVRGGPPLKDYRRDM 339

Query: 407  YVDRGRGPRWGLPRDRFDDHPY 342
            Y+ RGR  R G+ RDRF + PY
Sbjct: 340  YMGRGRDDRHGIRRDRFGE-PY 360


>ref|XP_002331165.1| predicted protein [Populus trichocarpa] gi|222873248|gb|EEF10379.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  196 bits (499), Expect = 1e-47
 Identities = 121/303 (39%), Positives = 145/303 (47%), Gaps = 8/303 (2%)
 Frame = -3

Query: 1244 MRAGSVSPLHQRKLDDRYRSDFDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1065
            +RAGS SP+ +R  D RY SDFD                                     
Sbjct: 33   LRAGSGSPVRRRDADRRYSSDFDNSGAPPRGRDFSNGRDRGRFRDSSPPYARGRGGGRPL 92

Query: 1064 XRDFNVRGFGRGSFRNDGMTRNSANVAPRDGDWVCPALSCGNLNFARREYCNKCNRPRLG 885
             R F+  GFG G  R +G++RN+ NV PR+GDW+C    CGNLNFARREYCN C RPR  
Sbjct: 93   GRGFDGPGFGPGPLRGEGVSRNNPNVRPREGDWICSDPLCGNLNFARREYCNNCKRPRYR 152

Query: 884  AGGSPRRNYLGPP-------RFSGPPLDRSPVRGGLNXXXXXXXXXXXXXXXREFRDGPP 726
             GGSPRR Y GPP       RF GPPLD SP R  +N                    GPP
Sbjct: 153  PGGSPRRGYPGPPPPHAPPRRFPGPPLDLSPGR-TMNGYRSPPRGWSRDGPRDFGPGGPP 211

Query: 725  HIRHGGRFPDPHIRRDRQEYPXXXXXXXXXXXRPVPPDWXXXXXXXXXXXXXXRAYDARN 546
              R GGRF D  +RR+R +YP           RP+P DW              + +    
Sbjct: 212  PPRQGGRFSDHDMRRERSDYPDDEYRVRNKFDRPMPMDWGHKDRGRDGLFNERKGF---- 267

Query: 545  ERRPLSPPPQALPSRVPSRDRWAHQVRERSRSPMMGG-PLKDQRQDSYVDRGRGPRWGLP 369
            ERRP SPP    P  +P R RW    R+RSRSP+ G  P K+ RQD Y++RGR  R  + 
Sbjct: 268  ERRPPSPP--LPPPSLPQRGRWGRDGRDRSRSPIRGAPPPKEFRQDMYMERGRDDRHPVG 325

Query: 368  RDR 360
            RDR
Sbjct: 326  RDR 328


>ref|XP_003534205.1| PREDICTED: uncharacterized protein LOC100799651 [Glycine max]
          Length = 369

 Score =  188 bits (477), Expect = 5e-45
 Identities = 127/345 (36%), Positives = 160/345 (46%), Gaps = 9/345 (2%)
 Frame = -3

Query: 1367 SDFENSSGPHAMHAGSISPLHHGKVDDRYRPDFDGSIDQHVMRAGSVSPLHQRKLDDRYR 1188
            +DFE    P  +H     P       DRY PD  G    + +RAGS SP+H+R  D R+ 
Sbjct: 40   ADFE----PGELHRDPPPPYSRS---DRY-PDEPG----YRIRAGSSSPVHRRDADHRFG 87

Query: 1187 SDFDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDFNVRGFGRGSFRNDGM 1008
            SD++                                        F+  GF  G  R +G 
Sbjct: 88   SDYNNMPRSRGYGGGRDPGRYRDPSPSYGRGRVGGRPMGRA---FDGPGFVSGLARGEGN 144

Query: 1007 TRNSANVAPRDGDWVCPALSCGNLNFARREYCNKCNRPRLGAGGSPRRNYLGPP------ 846
             RN+ NV PR+GDW+CP   C NLNFARR++CN CNR R     SPRR Y  PP      
Sbjct: 145  NRNNPNVRPREGDWICPDPLCNNLNFARRDHCNSCNRSRNAPARSPRRAYPAPPPLHAPP 204

Query: 845  -RFSGPPLDRSPVRGGLNXXXXXXXXXXXXXXXREFRDGPPHIRHGGRFPDPHIRRDRQE 669
             RF GPP+DRSP R  LN                      P +RH G+FPDPH+RR+R +
Sbjct: 205  RRFPGPPIDRSPER-TLNGYRSPPRGLARNGPREYGSAALPPLRHEGKFPDPHLRRERMD 263

Query: 668  YPXXXXXXXXXXXRPVPPDWXXXXXXXXXXXXXXRAYDARNERRPLSPPPQALPSRVPSR 489
            +            RP PPDW              + +    ERRPLSPPP  LPS    R
Sbjct: 264  FIEDAYRGRNKFDRPPPPDWDNRDRGRDGFSDEGKGF----ERRPLSPPPPLLPSLPHHR 319

Query: 488  -DRWAHQVRERSRSPMMGG-PLKDQRQDSYVDRGRGPRWGLPRDR 360
              RWA  VR+RSRSP+ GG P K+ R+D+++ R    R G+ RDR
Sbjct: 320  GGRWARDVRQRSRSPIRGGPPPKEYRRDTFMHRATDDRRGMGRDR 364


>ref|XP_003529991.1| PREDICTED: uncharacterized protein LOC100817587 [Glycine max]
          Length = 363

 Score =  175 bits (444), Expect = 3e-41
 Identities = 129/356 (36%), Positives = 161/356 (45%), Gaps = 20/356 (5%)
 Frame = -3

Query: 1367 SDFENSSGPHAMHAGSISPLHHGKVDDRYRPDFDGSIDQHVMRAGSVSPLHQRKLDDRYR 1188
            +DFE    P  +H     P       DRY PD  G    + +RAGS SP+H+R  D R+ 
Sbjct: 41   ADFE----PGELHRDPPPPYSRS---DRY-PDEPG----YRIRAGSSSPVHRRDADRRFA 88

Query: 1187 SDFDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDFNVRGFGRGSFRNDGM 1008
            SD++                                           R  G G  R +G 
Sbjct: 89   SDYNNLSRSRGYGGGRDPGRYRDPSPPYGRGRVGG------------RPMGSGLARGEGN 136

Query: 1007 TRNSANVAPRDGDWVCPALSCGNLNFARREYCNKCNRPRLGAGGSPRRNYLGPP------ 846
             RN+ NV PR+GDW+CP   C NLNFARR++CN CNR R     SPRR++  PP      
Sbjct: 137  NRNNPNVRPREGDWICPDPLCNNLNFARRDHCNSCNRSRNAPARSPRRSFPAPPPLHAPP 196

Query: 845  -RFSGPPLDRSPVRGGLNXXXXXXXXXXXXXXXREFRDGP--------PHIRHGGRFPDP 693
             RF GP +DRSP R  LN                  RDGP        P +RH GRFPDP
Sbjct: 197  RRFPGPLIDRSPER-TLNGYRSPRGLA---------RDGPREYGSAALPPLRHEGRFPDP 246

Query: 692  HIRRDRQEYPXXXXXXXXXXXRPVPPDWXXXXXXXXXXXXXXRAYDARNERRPLSPPPQA 513
            H+RR+R ++            RP P DW              + +    ERRPLSPP   
Sbjct: 247  HVRRERMDFIEDAYRGRNKFDRPPPLDWDNRDRGRDGFSDERKGF----ERRPLSPPVPF 302

Query: 512  LPSRVPSR-DRWAHQVRERSRSPMMGG-PLKDQRQDSYVDRGRG---PRWGLPRDR 360
            LPS    R  RWA  VRERSRSP+ GG P K+ R+D+++ R R     R G+ RDR
Sbjct: 303  LPSLPHHRGGRWARDVRERSRSPIRGGPPPKEYRRDTFMHRARDDRHDRHGMGRDR 358


>ref|XP_003620625.1| Zinc finger Ran-binding domain-containing protein [Medicago
            truncatula] gi|355495640|gb|AES76843.1| Zinc finger
            Ran-binding domain-containing protein [Medicago
            truncatula]
          Length = 379

 Score =  170 bits (430), Expect = 1e-39
 Identities = 118/332 (35%), Positives = 152/332 (45%), Gaps = 14/332 (4%)
 Frame = -3

Query: 1313 PLHHGKVDDRYRPDFDGSIDQHVMRAGSVSPLHQRK-LDDRYRSDFDTXXXXXXXXXXXX 1137
            P+++ +  DRY  D       +  RAGS SP+H R+  D R+ SD++             
Sbjct: 56   PVNYSR-SDRYSDDAG-----YRFRAGSSSPVHHRRDADHRFPSDYNHFPRNRGFGGGRD 109

Query: 1136 XXXXXXXXXXXXXXXXXXXXXXXXXRDFNVRGFGRGSFRNDGMT-RNSANVAPRDGDWVC 960
                                       F+  G+G    R +G+  RN+ NV PR+GDW+C
Sbjct: 110  FGRFRDPPHPYARGRPGGRPFGRA---FDGPGYGHRHGRGEGLHGRNNPNVRPREGDWMC 166

Query: 959  PALSCGNLNFARREYCNKCNRPRLGAGGSPRRN-----YLGPPRFSGPPLDRSPVR--GG 801
            P   CGNLNFARR++CN+C RPR  A GSP R      +  P R+ GPP DRSP R   G
Sbjct: 167  PDALCGNLNFARRDFCNQCKRPRPAAAGSPPRRGSPPLHAPPRRYPGPPFDRSPERPMNG 226

Query: 800  LNXXXXXXXXXXXXXXXREFRDGPPHIRHGGRFPDPHIRRDRQEYPXXXXXXXXXXXRPV 621
                                    P +RH GRFPDPH+ R+R +Y            RP 
Sbjct: 227  YRSPPPRLMGRDGLRDYGPAAAALPPLRHEGRFPDPHLHRERMDYMDDAYRGRGKFDRPP 286

Query: 620  PPDWXXXXXXXXXXXXXXRAYDARNERRPLSPPPQALPSRVPSR--DRWAHQVRERSRSP 447
            P DW              + +    ERRPLSP    LPS  P R  DRW+  VR+RSRSP
Sbjct: 287  PLDWDNRDRGRDGFSNERKGF----ERRPLSPSAPLLPSLPPHRGGDRWSRDVRDRSRSP 342

Query: 446  MMGG-PLKDQRQDSYVDRG--RGPRWGLPRDR 360
            + GG P KD R+D  + RG     R G+ RDR
Sbjct: 343  IRGGPPAKDYRRDPVMSRGGRDDRRGGVGRDR 374


Top