BLASTX nr result

ID: Coptis21_contig00009218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009218
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEN03273.1| methionine sulfoxide reductase A5 [Solanum lycope...   347   4e-93
ref|XP_002269473.1| PREDICTED: peptide methionine sulfoxide redu...   346   6e-93
ref|XP_003629340.1| Peptide methionine sulfoxide reductase msrA ...   337   4e-90
ref|XP_002530748.1| methionine sulfoxide reductase, putative [Ri...   334   3e-89
gb|AFK45762.1| unknown [Medicago truncatula]                          333   5e-89

>gb|AEN03273.1| methionine sulfoxide reductase A5 [Solanum lycopersicum]
          Length = 252

 Score =  347 bits (890), Expect = 4e-93
 Identities = 172/248 (69%), Positives = 200/248 (80%), Gaps = 3/248 (1%)
 Frame = -2

Query: 1173 FCVLGFAVVSIFMVQGVLSIRFPDQI---PLDAKEQNMNYNNQQPLKTAIFALGSFWRSE 1003
            FC      + +  +  VLSIRFPD+I   P DA        + QPL+TA+FALGSFWRSE
Sbjct: 13   FCFHFLFTIILLALNPVLSIRFPDRIQEVPQDA--------SNQPLQTAVFALGSFWRSE 64

Query: 1002 AVFGCLNGVVRTSAGYSGGSKLNPEFRSLGDHAESVQIEYNPRLIHFRQLLDVFWSSHDS 823
            A FGCLNG+VRT+ GYSGGSK NPE+R+LGDHAESVQ+EY+PR++ FRQLL+VFWSSHDS
Sbjct: 65   ASFGCLNGIVRTTVGYSGGSKANPEYRNLGDHAESVQVEYDPRVLGFRQLLEVFWSSHDS 124

Query: 822  RQVFGQGPDVGNQYRSIIFTNGTEEVRLAAASKEREQTKSRTNIVTTQIQHMGTFYPAEP 643
            RQVFGQGPDVGNQYRSIIFT+GTEE RLAA SKEREQ+KS+++IVTTQIQ +  FYPAEP
Sbjct: 125  RQVFGQGPDVGNQYRSIIFTSGTEESRLAAVSKEREQSKSKSSIVTTQIQQLEAFYPAEP 184

Query: 642  EHQKFELKRNPFLLQLIGNMPXXXXXXXXXXXXLNGYAAELCPQKTQKQIDAKINDIVKK 463
            EHQKFELKRNPFLLQL+GN+P            LNGYAAELCP + QK+ID KINDI+KK
Sbjct: 185  EHQKFELKRNPFLLQLMGNLPEEELERSTLATKLNGYAAELCPSRIQKRIDGKINDIIKK 244

Query: 462  GWPILREV 439
            GWPIL+EV
Sbjct: 245  GWPILKEV 252


>ref|XP_002269473.1| PREDICTED: peptide methionine sulfoxide reductase A5 [Vitis vinifera]
            gi|297735029|emb|CBI17391.3| unnamed protein product
            [Vitis vinifera]
          Length = 252

 Score =  346 bits (888), Expect = 6e-93
 Identities = 170/238 (71%), Positives = 200/238 (84%)
 Frame = -2

Query: 1152 VVSIFMVQGVLSIRFPDQIPLDAKEQNMNYNNQQPLKTAIFALGSFWRSEAVFGCLNGVV 973
            V+ I   +  +SIRFPD+I      +++  ++ QPLKTA+FALGSFWRSEAVFGCL+GVV
Sbjct: 20   VLIILTAERAVSIRFPDRI-----SESVKASSNQPLKTAVFALGSFWRSEAVFGCLDGVV 74

Query: 972  RTSAGYSGGSKLNPEFRSLGDHAESVQIEYNPRLIHFRQLLDVFWSSHDSRQVFGQGPDV 793
            RT+AGY+GGSK NPE+RS GDHAESVQIEYNPRLI FRQLL+VFWSSHDSRQVFGQGPDV
Sbjct: 75   RTTAGYAGGSKANPEYRSWGDHAESVQIEYNPRLITFRQLLEVFWSSHDSRQVFGQGPDV 134

Query: 792  GNQYRSIIFTNGTEEVRLAAASKEREQTKSRTNIVTTQIQHMGTFYPAEPEHQKFELKRN 613
            GNQYRSIIFTNGTEE+RLAA SKEREQT S+++IVTTQIQ +G F PAEPEHQKFELKRN
Sbjct: 135  GNQYRSIIFTNGTEELRLAAVSKEREQTVSKSSIVTTQIQQLGKFCPAEPEHQKFELKRN 194

Query: 612  PFLLQLIGNMPXXXXXXXXXXXXLNGYAAELCPQKTQKQIDAKINDIVKKGWPILREV 439
            PFL+QL+GN+P            LNG+AAELCP K Q+QI+A+I +I++KGWPILREV
Sbjct: 195  PFLIQLMGNLPEEELEKSTLAAKLNGFAAELCPPKVQQQINARIEEIIRKGWPILREV 252


>ref|XP_003629340.1| Peptide methionine sulfoxide reductase msrA [Medicago truncatula]
            gi|355523362|gb|AET03816.1| Peptide methionine sulfoxide
            reductase msrA [Medicago truncatula]
          Length = 252

 Score =  337 bits (864), Expect = 4e-90
 Identities = 165/240 (68%), Positives = 194/240 (80%)
 Frame = -2

Query: 1158 FAVVSIFMVQGVLSIRFPDQIPLDAKEQNMNYNNQQPLKTAIFALGSFWRSEAVFGCLNG 979
            F ++  F++     IRFPD++   A+EQ     +QQ L+TA+FALGSFWRSEAVFGCL G
Sbjct: 17   FIILIAFLINNANCIRFPDRVAQPAREQP----DQQRLQTAVFALGSFWRSEAVFGCLPG 72

Query: 978  VVRTSAGYSGGSKLNPEFRSLGDHAESVQIEYNPRLIHFRQLLDVFWSSHDSRQVFGQGP 799
            VVRT+ GYSGGSK NPE+RS GDHAESVQ+EY+PRLI F +LLD+FWSSHD RQVFGQGP
Sbjct: 73   VVRTTVGYSGGSKPNPEYRSFGDHAESVQVEYDPRLISFGELLDIFWSSHDPRQVFGQGP 132

Query: 798  DVGNQYRSIIFTNGTEEVRLAAASKEREQTKSRTNIVTTQIQHMGTFYPAEPEHQKFELK 619
            DVGNQYRSIIF NGTEE R+A+ SKE+EQT+SR++IVTTQI  +GTF+PAEPEHQKFELK
Sbjct: 133  DVGNQYRSIIFVNGTEESRMASVSKEQEQTRSRSSIVTTQILQLGTFHPAEPEHQKFELK 192

Query: 618  RNPFLLQLIGNMPXXXXXXXXXXXXLNGYAAELCPQKTQKQIDAKINDIVKKGWPILREV 439
            +N FLLQLIGN+P            LNGY AELCP   QKQIDAKIN+I+KKGWPILRE+
Sbjct: 193  QNTFLLQLIGNLPEEELERSNLATKLNGYVAELCPPNIQKQIDAKINEILKKGWPILREL 252


>ref|XP_002530748.1| methionine sulfoxide reductase, putative [Ricinus communis]
            gi|223529712|gb|EEF31654.1| methionine sulfoxide
            reductase, putative [Ricinus communis]
          Length = 253

 Score =  334 bits (856), Expect = 3e-89
 Identities = 164/231 (70%), Positives = 189/231 (81%)
 Frame = -2

Query: 1131 QGVLSIRFPDQIPLDAKEQNMNYNNQQPLKTAIFALGSFWRSEAVFGCLNGVVRTSAGYS 952
            Q   SIR P++  + +     ++   QPLKTA+FALGSFWRSEAVFGCLNGVVRT+AGYS
Sbjct: 26   QTAFSIRIPNRSSIPSSGDPSDH---QPLKTAVFALGSFWRSEAVFGCLNGVVRTTAGYS 82

Query: 951  GGSKLNPEFRSLGDHAESVQIEYNPRLIHFRQLLDVFWSSHDSRQVFGQGPDVGNQYRSI 772
            GGSK NPE+RSLG HAESVQ+EY+PR+I +RQLL+VFWSSHDSRQVFGQGPDVGNQYRSI
Sbjct: 83   GGSKPNPEYRSLGYHAESVQVEYDPRVISYRQLLEVFWSSHDSRQVFGQGPDVGNQYRSI 142

Query: 771  IFTNGTEEVRLAAASKEREQTKSRTNIVTTQIQHMGTFYPAEPEHQKFELKRNPFLLQLI 592
            IFTNGTEE RLA  SKE+EQ KSR+++VTTQIQ +  FYPAEPEHQKFELKR PFLLQL+
Sbjct: 143  IFTNGTEESRLAGVSKEKEQLKSRSSVVTTQIQQLVAFYPAEPEHQKFELKRRPFLLQLM 202

Query: 591  GNMPXXXXXXXXXXXXLNGYAAELCPQKTQKQIDAKINDIVKKGWPILREV 439
            GN+P            LNGYA ELCP K Q QI+AKINDIV+KGWP+LR+V
Sbjct: 203  GNLPEEELERSSLAAKLNGYAVELCPPKVQSQIEAKINDIVRKGWPVLRDV 253


>gb|AFK45762.1| unknown [Medicago truncatula]
          Length = 252

 Score =  333 bits (854), Expect = 5e-89
 Identities = 163/240 (67%), Positives = 194/240 (80%)
 Frame = -2

Query: 1158 FAVVSIFMVQGVLSIRFPDQIPLDAKEQNMNYNNQQPLKTAIFALGSFWRSEAVFGCLNG 979
            F ++  F++     IRFPD++   A+EQ     +QQ L+TA+FALGSFWRSEAVFGCL G
Sbjct: 17   FIILIAFLINNANCIRFPDRVAQPAREQP----DQQRLQTAVFALGSFWRSEAVFGCLPG 72

Query: 978  VVRTSAGYSGGSKLNPEFRSLGDHAESVQIEYNPRLIHFRQLLDVFWSSHDSRQVFGQGP 799
            VVRT+ GYSGGSK NPE+RS GDHAESVQ+EY+PRLI F +LLD+FWSSHD R+VFGQGP
Sbjct: 73   VVRTTVGYSGGSKPNPEYRSFGDHAESVQVEYDPRLISFGELLDIFWSSHDPRRVFGQGP 132

Query: 798  DVGNQYRSIIFTNGTEEVRLAAASKEREQTKSRTNIVTTQIQHMGTFYPAEPEHQKFELK 619
            DVGNQYRSIIF NGTEE R+A+ SKE+EQT+SR++IVTTQI  +GTF+PAEPE+QKFELK
Sbjct: 133  DVGNQYRSIIFVNGTEESRMASVSKEQEQTRSRSSIVTTQILQLGTFHPAEPEYQKFELK 192

Query: 618  RNPFLLQLIGNMPXXXXXXXXXXXXLNGYAAELCPQKTQKQIDAKINDIVKKGWPILREV 439
            +N FLLQLIGN+P            LNGY AELCP   QKQIDAKIN+I+KKGWPILRE+
Sbjct: 193  QNTFLLQLIGNLPEEELERSNLATKLNGYVAELCPPNIQKQIDAKINEILKKGWPILREL 252


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