BLASTX nr result

ID: Coptis21_contig00009213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009213
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314801.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-40
ref|XP_002284485.1| PREDICTED: uncharacterized protein LOC100249...   132   3e-38
ref|XP_002526033.1| conserved hypothetical protein [Ricinus comm...   132   1e-36
ref|XP_002887333.1| hypothetical protein ARALYDRAFT_476225 [Arab...   124   1e-34
ref|NP_565005.1| uncharacterized protein [Arabidopsis thaliana] ...   122   2e-33

>ref|XP_002314801.1| predicted protein [Populus trichocarpa] gi|222863841|gb|EEF00972.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  135 bits (340), Expect(2) = 3e-40
 Identities = 65/74 (87%), Positives = 69/74 (93%)
 Frame = -1

Query: 224 CLQGDQHLVERIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGVASSLYHSSRGELR 45
           C+ GDQHL E +ANV+TSLPFIALGIQAPRKN NTKLYANSLIGVGVASSLYHSSRG+LR
Sbjct: 73  CIHGDQHLAETVANVITSLPFIALGIQAPRKNLNTKLYANSLIGVGVASSLYHSSRGKLR 132

Query: 44  KYLRWADYTMIATA 3
           KYLRW DYTMIATA
Sbjct: 133 KYLRWFDYTMIATA 146



 Score = 56.2 bits (134), Expect(2) = 3e-40
 Identities = 29/61 (47%), Positives = 40/61 (65%)
 Frame = -3

Query: 519 MSPQTKQSSGKSLKGIHGVHMVPHSPFPVKEDSQCGYLHQSTYYEGSSTEDNRRLFMLRL 340
           MS Q+  +  K+L+G+HG+H+VPHSPF +KE +Q G   QST  E S    N+ L M R+
Sbjct: 1   MSHQSTFNPSKTLEGVHGIHVVPHSPFALKEINQQGDFPQST-CESSGNGLNQLLLMQRV 59

Query: 339 W 337
           W
Sbjct: 60  W 60


>ref|XP_002284485.1| PREDICTED: uncharacterized protein LOC100249059 [Vitis vinifera]
           gi|147801559|emb|CAN77015.1| hypothetical protein
           VITISV_036885 [Vitis vinifera]
           gi|297737691|emb|CBI26892.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  132 bits (333), Expect(2) = 3e-38
 Identities = 64/75 (85%), Positives = 68/75 (90%)
 Frame = -1

Query: 227 CCLQGDQHLVERIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGVASSLYHSSRGEL 48
           CCL GD+ L E +ANVLTSLPFIALGIQAPRKN N KLYANSLIGVG+AS LYHSSRG+L
Sbjct: 71  CCLNGDESLGETVANVLTSLPFIALGIQAPRKNLNCKLYANSLIGVGIASGLYHSSRGKL 130

Query: 47  RKYLRWADYTMIATA 3
           RKYLRWADYTMIATA
Sbjct: 131 RKYLRWADYTMIATA 145



 Score = 52.0 bits (123), Expect(2) = 3e-38
 Identities = 28/61 (45%), Positives = 42/61 (68%)
 Frame = -3

Query: 519 MSPQTKQSSGKSLKGIHGVHMVPHSPFPVKEDSQCGYLHQSTYYEGSSTEDNRRLFMLRL 340
           MS Q+K +  ++L G+HGV +VPHSPF ++E ++ G   +ST  E SS E N+RL M ++
Sbjct: 1   MSHQSKSNPSRALDGVHGVRVVPHSPFALEEITKPGDFDRST-CERSSIEANQRLLM-QV 58

Query: 339 W 337
           W
Sbjct: 59  W 59


>ref|XP_002526033.1| conserved hypothetical protein [Ricinus communis]
           gi|223534680|gb|EEF36373.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 262

 Score =  132 bits (331), Expect(2) = 1e-36
 Identities = 61/74 (82%), Positives = 67/74 (90%)
 Frame = -1

Query: 227 CCLQGDQHLVERIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGVASSLYHSSRGEL 48
           CC+ GD+HL E +ANVLTSLPFIALG+QAPRKN  TK+YANSLIGVGVASSLYHSSRG +
Sbjct: 85  CCINGDKHLAETVANVLTSLPFIALGLQAPRKNLTTKMYANSLIGVGVASSLYHSSRGRI 144

Query: 47  RKYLRWADYTMIAT 6
           RKYLRW DYTMIAT
Sbjct: 145 RKYLRWLDYTMIAT 158



 Score = 47.8 bits (112), Expect(2) = 1e-36
 Identities = 23/61 (37%), Positives = 37/61 (60%)
 Frame = -3

Query: 519 MSPQTKQSSGKSLKGIHGVHMVPHSPFPVKEDSQCGYLHQSTYYEGSSTEDNRRLFMLRL 340
           M+ Q+  +  K+L+G+HG+H+VPHSPF ++E +  G   QST         N++L + R 
Sbjct: 14  MNRQSTTNPSKALEGVHGIHVVPHSPFALEEITHQGDFSQST-CGNLVNRANQQLLLQRA 72

Query: 339 W 337
           W
Sbjct: 73  W 73


>ref|XP_002887333.1| hypothetical protein ARALYDRAFT_476225 [Arabidopsis lyrata subsp.
           lyrata] gi|297333174|gb|EFH63592.1| hypothetical protein
           ARALYDRAFT_476225 [Arabidopsis lyrata subsp. lyrata]
          Length = 244

 Score =  124 bits (310), Expect(2) = 1e-34
 Identities = 58/75 (77%), Positives = 67/75 (89%)
 Frame = -1

Query: 227 CCLQGDQHLVERIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGVASSLYHSSRGEL 48
           C + GDQ ++E  ANV+TS+PFI LG+QAPRKN N K+YANSLIGVG+ASSLYHSSRG+L
Sbjct: 67  CSIHGDQSILETAANVITSIPFIFLGMQAPRKNLNMKVYANSLIGVGIASSLYHSSRGKL 126

Query: 47  RKYLRWADYTMIATA 3
           RKYLRWADYTMIATA
Sbjct: 127 RKYLRWADYTMIATA 141



 Score = 48.9 bits (115), Expect(2) = 1e-34
 Identities = 24/61 (39%), Positives = 37/61 (60%)
 Frame = -3

Query: 519 MSPQTKQSSGKSLKGIHGVHMVPHSPFPVKEDSQCGYLHQSTYYEGSSTEDNRRLFMLRL 340
           MSPQ+  ++ KSL+G+HGVH+V HS F  +       + Q + YE +     +RLF+ R+
Sbjct: 1   MSPQSVSTTSKSLEGVHGVHVVSHSHFGFES------IGQVSSYESADAGTKQRLFIERV 54

Query: 339 W 337
           W
Sbjct: 55  W 55


>ref|NP_565005.1| uncharacterized protein [Arabidopsis thaliana]
           gi|5902404|gb|AAD55506.1|AC008148_16 Unknown protein
           [Arabidopsis thaliana] gi|15293127|gb|AAK93674.1|
           unknown protein [Arabidopsis thaliana]
           gi|19310637|gb|AAL85049.1| unknown protein [Arabidopsis
           thaliana] gi|332197016|gb|AEE35137.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 244

 Score =  122 bits (306), Expect(2) = 2e-33
 Identities = 57/75 (76%), Positives = 66/75 (88%)
 Frame = -1

Query: 227 CCLQGDQHLVERIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGVASSLYHSSRGEL 48
           C + GDQ ++E  ANV+TS+PFI LG+QAPRKN N K+YANSLIGVG+ASSLYHSSRG+ 
Sbjct: 67  CSIHGDQSILETAANVITSIPFIFLGMQAPRKNLNMKVYANSLIGVGIASSLYHSSRGKF 126

Query: 47  RKYLRWADYTMIATA 3
           RKYLRWADYTMIATA
Sbjct: 127 RKYLRWADYTMIATA 141



 Score = 46.6 bits (109), Expect(2) = 2e-33
 Identities = 23/61 (37%), Positives = 36/61 (59%)
 Frame = -3

Query: 519 MSPQTKQSSGKSLKGIHGVHMVPHSPFPVKEDSQCGYLHQSTYYEGSSTEDNRRLFMLRL 340
           MSPQ+   + KSL+G+HGVH+V HS F  +       + Q + +E +     +RLF+ R+
Sbjct: 1   MSPQSVSKTSKSLEGVHGVHVVSHSHFGFES------IGQVSGFESADAGTKQRLFIERV 54

Query: 339 W 337
           W
Sbjct: 55  W 55


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