BLASTX nr result

ID: Coptis21_contig00009205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009205
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote...   307   3e-81
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]   307   3e-81
ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1...   300   3e-79
ref|XP_002531170.1| carbon catabolite repressor protein, putativ...   296   6e-78
ref|XP_002878228.1| hypothetical protein ARALYDRAFT_907339 [Arab...   294   2e-77

>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
           vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
           product [Vitis vinifera]
          Length = 603

 Score =  307 bits (786), Expect = 3e-81
 Identities = 156/217 (71%), Positives = 167/217 (76%)
 Frame = +2

Query: 2   KRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFSSVPXXXXXX 181
           KRQLLCVANTH+NVHQ+LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDF+SVP      
Sbjct: 413 KRQLLCVANTHINVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVP------ 466

Query: 182 XXXXXXXXXXXXXXXXXXXXGSAPHALLAMGKVDQSHPDLTVDPLQIVRPASKITHQLPL 361
                               GSAPHALLAMGKVD  HPDL +DPL I+RPASK+THQLPL
Sbjct: 467 --------------------GSAPHALLAMGKVDPMHPDLAIDPLGILRPASKLTHQLPL 506

Query: 362 VSAYSLFARMGIGIGLEQQRRRMDTTTNEPLFTNCTRDFIGTNDYIFYTADXXXXXXXXX 541
           VSAYS FARMG+GIGLEQQRRR+D +TNEPLFT+CTRDFIGT DYIFYTAD         
Sbjct: 507 VSAYSSFARMGVGIGLEQQRRRLDPSTNEPLFTHCTRDFIGTLDYIFYTADSLTVESLLE 566

Query: 542 XXXXXXXRKDTALPSPEWSSDHIALLAEFRCMPKTRR 652
                  RKDTALPSPEWSSDHIALLAEFRC P+TRR
Sbjct: 567 LLDEDSLRKDTALPSPEWSSDHIALLAEFRCKPRTRR 603


>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
          Length = 603

 Score =  307 bits (786), Expect = 3e-81
 Identities = 156/217 (71%), Positives = 167/217 (76%)
 Frame = +2

Query: 2   KRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFSSVPXXXXXX 181
           KRQLLCVANTH+NVHQ+LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDF+SVP      
Sbjct: 413 KRQLLCVANTHINVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVP------ 466

Query: 182 XXXXXXXXXXXXXXXXXXXXGSAPHALLAMGKVDQSHPDLTVDPLQIVRPASKITHQLPL 361
                               GSAPHALLAMGKVD  HPDL +DPL I+RPASK+THQLPL
Sbjct: 467 --------------------GSAPHALLAMGKVDPMHPDLAIDPLGILRPASKLTHQLPL 506

Query: 362 VSAYSLFARMGIGIGLEQQRRRMDTTTNEPLFTNCTRDFIGTNDYIFYTADXXXXXXXXX 541
           VSAYS FARMG+GIGLEQQRRR+D +TNEPLFT+CTRDFIGT DYIFYTAD         
Sbjct: 507 VSAYSSFARMGVGIGLEQQRRRLDPSTNEPLFTHCTRDFIGTLDYIFYTADSLTVESLLE 566

Query: 542 XXXXXXXRKDTALPSPEWSSDHIALLAEFRCMPKTRR 652
                  RKDTALPSPEWSSDHIALLAEFRC P+TRR
Sbjct: 567 LLDEDSLRKDTALPSPEWSSDHIALLAEFRCKPRTRR 603


>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
           unknown [Populus trichocarpa]
           gi|222867975|gb|EEF05106.1| predicted protein [Populus
           trichocarpa]
          Length = 603

 Score =  300 bits (768), Expect = 3e-79
 Identities = 154/217 (70%), Positives = 164/217 (75%)
 Frame = +2

Query: 2   KRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFSSVPXXXXXX 181
           KRQLLCVANTH+NVHQDLKDVKLWQV TLLKGLEKIAASADIPMLVCGDF+SVP      
Sbjct: 413 KRQLLCVANTHINVHQDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSVP------ 466

Query: 182 XXXXXXXXXXXXXXXXXXXXGSAPHALLAMGKVDQSHPDLTVDPLQIVRPASKITHQLPL 361
                               GSAPH+LLAMGKVDQ HPDL VDPL I+RP SK+THQLPL
Sbjct: 467 --------------------GSAPHSLLAMGKVDQLHPDLVVDPLGILRPHSKLTHQLPL 506

Query: 362 VSAYSLFARMGIGIGLEQQRRRMDTTTNEPLFTNCTRDFIGTNDYIFYTADXXXXXXXXX 541
           VSAYS FAR+G+G+G +QQRRRMD TTNEPLFTNCTRDFIGT DYIFYTAD         
Sbjct: 507 VSAYSSFARVGVGLGSDQQRRRMDATTNEPLFTNCTRDFIGTLDYIFYTADSLTVESLLE 566

Query: 542 XXXXXXXRKDTALPSPEWSSDHIALLAEFRCMPKTRR 652
                  RKDTALPSPEWSSDHIALLAEFRC P+ RR
Sbjct: 567 LLDEESLRKDTALPSPEWSSDHIALLAEFRCKPRPRR 603


>ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis]
           gi|223529240|gb|EEF31213.1| carbon catabolite repressor
           protein, putative [Ricinus communis]
          Length = 603

 Score =  296 bits (757), Expect = 6e-78
 Identities = 151/217 (69%), Positives = 162/217 (74%)
 Frame = +2

Query: 2   KRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFSSVPXXXXXX 181
           KRQLLCVANTHVN+H DLKDVKLWQV TLLKGLEKIAASADIPMLVCGDF+S+P      
Sbjct: 413 KRQLLCVANTHVNIHHDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSMP------ 466

Query: 182 XXXXXXXXXXXXXXXXXXXXGSAPHALLAMGKVDQSHPDLTVDPLQIVRPASKITHQLPL 361
                               GSAPH+LLAMGKVD  HPDL +DPL I+RP SK+THQLPL
Sbjct: 467 --------------------GSAPHSLLAMGKVDPLHPDLVIDPLGILRPHSKLTHQLPL 506

Query: 362 VSAYSLFARMGIGIGLEQQRRRMDTTTNEPLFTNCTRDFIGTNDYIFYTADXXXXXXXXX 541
           VSAYS FAR+G+G+GLEQQRRRMD  TNEPLFTNCTRDFIGT DYIFYTAD         
Sbjct: 507 VSAYSSFARLGVGLGLEQQRRRMDPATNEPLFTNCTRDFIGTLDYIFYTADSLTVESLLE 566

Query: 542 XXXXXXXRKDTALPSPEWSSDHIALLAEFRCMPKTRR 652
                  RKDTALPSPEWSSDHIALLAEFRC P+ RR
Sbjct: 567 LLDEESLRKDTALPSPEWSSDHIALLAEFRCKPRPRR 603


>ref|XP_002878228.1| hypothetical protein ARALYDRAFT_907339 [Arabidopsis lyrata subsp.
           lyrata] gi|297324066|gb|EFH54487.1| hypothetical protein
           ARALYDRAFT_907339 [Arabidopsis lyrata subsp. lyrata]
          Length = 602

 Score =  294 bits (753), Expect = 2e-77
 Identities = 148/217 (68%), Positives = 161/217 (74%)
 Frame = +2

Query: 2   KRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFSSVPXXXXXX 181
           KRQL+CVANTHVNV QDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDF+++P      
Sbjct: 411 KRQLICVANTHVNVQQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNTIP------ 464

Query: 182 XXXXXXXXXXXXXXXXXXXXGSAPHALLAMGKVDQSHPDLTVDPLQIVRPASKITHQLPL 361
                               GSAPH LL MGKVD  HPDL VDPL I+RP +K+THQLPL
Sbjct: 465 --------------------GSAPHTLLVMGKVDPGHPDLAVDPLNILRPHTKLTHQLPL 504

Query: 362 VSAYSLFARMGIGIGLEQQRRRMDTTTNEPLFTNCTRDFIGTNDYIFYTADXXXXXXXXX 541
           VSAYS F R G+G+GLEQ RRR+D  TNEPLFTNCTRDFIGT+DYIFYTAD         
Sbjct: 505 VSAYSSFVRNGMGVGLEQHRRRIDLNTNEPLFTNCTRDFIGTHDYIFYTADTLMVESLLE 564

Query: 542 XXXXXXXRKDTALPSPEWSSDHIALLAEFRCMPKTRR 652
                  RKDTALPSPEWSS+HIALLAEFRCMP+TRR
Sbjct: 565 LLDEDGLRKDTALPSPEWSSNHIALLAEFRCMPRTRR 601


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