BLASTX nr result
ID: Coptis21_contig00009204
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009204
(1949 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 703 0.0
emb|CBI32700.3| unnamed protein product [Vitis vinifera] 699 0.0
emb|CAN61726.1| hypothetical protein VITISV_032421 [Vitis vinifera] 691 0.0
ref|XP_004137811.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 684 0.0
ref|NP_001060473.1| Os07g0647900 [Oryza sativa Japonica Group] g... 674 0.0
>ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57 [Vitis vinifera]
Length = 524
Score = 703 bits (1814), Expect = 0.0
Identities = 365/513 (71%), Positives = 421/513 (82%), Gaps = 1/513 (0%)
Frame = -2
Query: 1810 VDRDASFLFSGIHFDKKNIPGVFSISKGKREERDEVEALEIEKVESEERMVSGKKRKRKT 1631
+++ SFLFSGI FDKK FS K K+E D VE+ K E+EE KKRKRK
Sbjct: 1 MEKGTSFLFSGITFDKKKFAADFSRFKEKKESDDLVES---GKSEAEEGARPVKKRKRKA 57
Query: 1630 KDSERVEGFNVFKSSDSVPVAEEKEKVEDVGVRE-KKEYHRQIERDALLRKKHGIHISGH 1454
++ VEGFNVFK+S S ++ E + + KKE +RQIERDALLRKKH IHISG+
Sbjct: 58 TVADPVEGFNVFKTSKSSAQGIQQNDQEKSELSQAKKELNRQIERDALLRKKHKIHISGN 117
Query: 1453 NVPSPLQNFDDLSSRYGCKSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFACAPTGSG 1274
NVPSPL+NF +LSSRYGC+SYL LAELGFKEPTPIQRQAIPV+LSGRECFACAPTGSG
Sbjct: 118 NVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSG 177
Query: 1273 KTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXLMTRDLAK 1094
KTLAF+ P+LMKL+ SK+GIRAVILCPTRELAAQT RE L+T++L +
Sbjct: 178 KTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLLTKELLR 237
Query: 1093 NGSFQTMHCDIIVSTPFRMEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQIDCVVKAC 914
+G + CDI++STP R+ AIRK+KLDLSRVEYLVLDESDKLFELG VKQID VVKAC
Sbjct: 238 SGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELGLVKQIDAVVKAC 297
Query: 913 SNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSEYGKLIA 734
SNPSIIRSLFSATLPD VEELARTIMHDAVRVI+GRKNSASELI+QKLVFAGSE GKL+A
Sbjct: 298 SNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNSASELIKQKLVFAGSEEGKLLA 357
Query: 733 IRQTFSESWNPPVLVFVQSIERAKQLYRELAFENIRVDIIHSDLSQIQRDNAVENFRAGK 554
+RQ+F+ES NPP+L+FVQS ERAK+LY ELAF++IRVD+IH+DLSQ QR+NAV++FRAGK
Sbjct: 358 LRQSFAESLNPPILLFVQSKERAKELYTELAFDDIRVDVIHADLSQSQRENAVDDFRAGK 417
Query: 553 KWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFYTDTDVK 374
WVLIATDVI+RGMDFKG+NCVINYD P+S AAYIHRIGR GRAGR G+AIT YT+ DV
Sbjct: 418 TWVLIATDVIARGMDFKGINCVINYDFPDSPAAYIHRIGRSGRAGRTGEAITIYTEDDVP 477
Query: 373 FLRNIANVIAASGCEVPSWIMALPKLRRTKHRP 275
FLRNIANV+AASGCEVPSWIMALPKL+ KHRP
Sbjct: 478 FLRNIANVMAASGCEVPSWIMALPKLKWKKHRP 510
>emb|CBI32700.3| unnamed protein product [Vitis vinifera]
Length = 523
Score = 699 bits (1805), Expect = 0.0
Identities = 363/513 (70%), Positives = 423/513 (82%), Gaps = 1/513 (0%)
Frame = -2
Query: 1810 VDRDASFLFSGIHFDKKNIPGVFSISKGKREERDEVEALEIEKVESEERMVSGKKRKRKT 1631
+++ SFLFSGI FDKK FS + K++E D++ +E K E+EE KKRKRK
Sbjct: 1 MEKGTSFLFSGITFDKKKFAADFS--RFKKKESDDL--VESGKSEAEEGARPVKKRKRKA 56
Query: 1630 KDSERVEGFNVFKSSDSVPVAEEKEKVEDVGVRE-KKEYHRQIERDALLRKKHGIHISGH 1454
++ VEGFNVFK+S S ++ E + + KKE +RQIERDALLRKKH IHISG+
Sbjct: 57 TVADPVEGFNVFKTSKSSAQGIQQNDQEKSELSQAKKELNRQIERDALLRKKHKIHISGN 116
Query: 1453 NVPSPLQNFDDLSSRYGCKSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFACAPTGSG 1274
NVPSPL+NF +LSSRYGC+SYL LAELGFKEPTPIQRQAIPV+LSGRECFACAPTGSG
Sbjct: 117 NVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSG 176
Query: 1273 KTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXLMTRDLAK 1094
KTLAF+ P+LMKL+ SK+GIRAVILCPTRELAAQT RE L+T++L +
Sbjct: 177 KTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLLTKELLR 236
Query: 1093 NGSFQTMHCDIIVSTPFRMEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQIDCVVKAC 914
+G + CDI++STP R+ AIRK+KLDLSRVEYLVLDESDKLFELG VKQID VVKAC
Sbjct: 237 SGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELGLVKQIDAVVKAC 296
Query: 913 SNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSEYGKLIA 734
SNPSIIRSLFSATLPD VEELARTIMHDAVRVI+GRKNSASELI+QKLVFAGSE GKL+A
Sbjct: 297 SNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNSASELIKQKLVFAGSEEGKLLA 356
Query: 733 IRQTFSESWNPPVLVFVQSIERAKQLYRELAFENIRVDIIHSDLSQIQRDNAVENFRAGK 554
+RQ+F+ES NPP+L+FVQS ERAK+LY ELAF++IRVD+IH+DLSQ QR+NAV++FRAGK
Sbjct: 357 LRQSFAESLNPPILLFVQSKERAKELYTELAFDDIRVDVIHADLSQSQRENAVDDFRAGK 416
Query: 553 KWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFYTDTDVK 374
WVLIATDVI+RGMDFKG+NCVINYD P+S AAYIHRIGR GRAGR G+AIT YT+ DV
Sbjct: 417 TWVLIATDVIARGMDFKGINCVINYDFPDSPAAYIHRIGRSGRAGRTGEAITIYTEDDVP 476
Query: 373 FLRNIANVIAASGCEVPSWIMALPKLRRTKHRP 275
FLRNIANV+AASGCEVPSWIMALPKL+ KHRP
Sbjct: 477 FLRNIANVMAASGCEVPSWIMALPKLKWKKHRP 509
>emb|CAN61726.1| hypothetical protein VITISV_032421 [Vitis vinifera]
Length = 554
Score = 691 bits (1783), Expect = 0.0
Identities = 361/513 (70%), Positives = 417/513 (81%), Gaps = 1/513 (0%)
Frame = -2
Query: 1810 VDRDASFLFSGIHFDKKNIPGVFSISKGKREERDEVEALEIEKVESEERMVSGKKRKRKT 1631
+++ SFLFSGI FDKK FS K K+E D VE+ K E+EE KKRKRK
Sbjct: 1 MEKGTSFLFSGITFDKKKFAADFSRFKEKKESDDLVES---GKSEAEEGARPVKKRKRKA 57
Query: 1630 KDSERVEGFNVFKSSDSVPVAEEKEKVEDVGVRE-KKEYHRQIERDALLRKKHGIHISGH 1454
++ VEGFNVFK+S S ++ E + + KKE +RQIERDALLRKKH IHISG+
Sbjct: 58 TVADPVEGFNVFKTSKSSAQGIQQNDQEKSELSQAKKELNRQIERDALLRKKHXIHISGN 117
Query: 1453 NVPSPLQNFDDLSSRYGCKSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFACAPTGSG 1274
NVPSPL+NF +LSSRYGC+SYL LAELGFKEPTPIQRQAIP GRECFACAPTGSG
Sbjct: 118 NVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIP----GRECFACAPTGSG 173
Query: 1273 KTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXLMTRDLAK 1094
KTLAF+ P+LMKL+ SK+GIRAVILCPTRELAAQT RE L+T++L +
Sbjct: 174 KTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLLTKELLR 233
Query: 1093 NGSFQTMHCDIIVSTPFRMEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQIDCVVKAC 914
+G + CDI++STP R+ AIRK+KLDLSRVEYLVLDESDKLFELG VKQID VVKAC
Sbjct: 234 SGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELGLVKQIDAVVKAC 293
Query: 913 SNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSEYGKLIA 734
SNPSIIRSLFSATLPD VEELARTIMHDAVRVI+GRKNSASELI+QKLVFAG+E GKL+A
Sbjct: 294 SNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNSASELIKQKLVFAGNEEGKLLA 353
Query: 733 IRQTFSESWNPPVLVFVQSIERAKQLYRELAFENIRVDIIHSDLSQIQRDNAVENFRAGK 554
+RQ+F+ES NPP+L+FVQS ERAK+LY ELAF++IRVD+IH+DLSQ QR+NAV++FRAGK
Sbjct: 354 LRQSFAESLNPPILLFVQSKERAKELYTELAFDDIRVDVIHADLSQSQRENAVDDFRAGK 413
Query: 553 KWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFYTDTDVK 374
WVLIATDVI+RGMDFKG+NCVINYD P+S AAYIHRIGR GRAGR G+AIT YT+ DV
Sbjct: 414 TWVLIATDVIARGMDFKGINCVINYDFPDSPAAYIHRIGRSGRAGRTGEAITIYTEDDVP 473
Query: 373 FLRNIANVIAASGCEVPSWIMALPKLRRTKHRP 275
FLRNIANV+AASGCEVPSWIMALPKL+ KHRP
Sbjct: 474 FLRNIANVMAASGCEVPSWIMALPKLKWKKHRP 506
>ref|XP_004137811.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Cucumis
sativus]
Length = 616
Score = 684 bits (1764), Expect = 0.0
Identities = 347/520 (66%), Positives = 417/520 (80%), Gaps = 8/520 (1%)
Frame = -2
Query: 1810 VDRDASFLFSGIHFDKKNIPGVFSISKGKREERDEVE---ALEIEKVESEERMVSGKKRK 1640
+++ SFLF+GIHFDKK F+ +GK+E + VE +++ +E E KRK
Sbjct: 1 MEKGTSFLFAGIHFDKKRFAADFAKFEGKKESDNVVEGPSSIDNGDLEVHEGSTPSDKRK 60
Query: 1639 RKTKDS--ERVEGFNVFKSSDSVP---VAEEKEKVEDVGVREKKEYHRQIERDALLRKKH 1475
RK K + + VEGF+VFK S S + EE E+ EKKE++R++ERDAL RKK+
Sbjct: 61 RKRKSATAKSVEGFSVFKDSKSTADTSLNEENHLSENDPSEEKKEFYRKLERDALFRKKY 120
Query: 1474 GIHISGHNVPSPLQNFDDLSSRYGCKSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFA 1295
IH+SG+NVPSPLQNF +LS+RY C SYL L ELGFKEPTPIQRQAIPV+LSGRECFA
Sbjct: 121 NIHVSGNNVPSPLQNFGELSTRYDCDSYLLHNLVELGFKEPTPIQRQAIPVLLSGRECFA 180
Query: 1294 CAPTGSGKTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXL 1115
CAPTGSGKTLAF+ P+LM+L+ SKEGIRAVILCPTRELA+QT REC L
Sbjct: 181 CAPTGSGKTLAFVCPMLMRLKDPSKEGIRAVILCPTRELASQTIRECKKLAKGKKFHIKL 240
Query: 1114 MTRDLAKNGSFQTMHCDIIVSTPFRMEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQI 935
+T+++ ++ F CD+++STP R+ AIRK+K+DLSRVEYLVLDESDKLFELG +KQI
Sbjct: 241 VTKEVLRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEYLVLDESDKLFELGLIKQI 300
Query: 934 DCVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGS 755
D VVKACSNPSI+RSLFSATLPD VE+LAR++MHDAVRVIVGRKN+ASE ++QKLVFAGS
Sbjct: 301 DAVVKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGS 360
Query: 754 EYGKLIAIRQTFSESWNPPVLVFVQSIERAKQLYRELAFENIRVDIIHSDLSQIQRDNAV 575
E GKL+A+RQ+FSES NPPVL+FVQS ERAK+LY ELAFENIRV +IHSDLSQ++R+N V
Sbjct: 361 EEGKLLALRQSFSESLNPPVLIFVQSKERAKELYGELAFENIRVSVIHSDLSQLERENVV 420
Query: 574 ENFRAGKKWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITF 395
++FRAGK WVLIATDVISRGMDFKGVNCVINYD P+SAAAYIHRIGR GRAGR G+AITF
Sbjct: 421 DDFRAGKTWVLIATDVISRGMDFKGVNCVINYDFPDSAAAYIHRIGRSGRAGRSGEAITF 480
Query: 394 YTDTDVKFLRNIANVIAASGCEVPSWIMALPKLRRTKHRP 275
YTD D+ FLRNIANV++ASGCEVPSWI L K++ KHRP
Sbjct: 481 YTDEDIPFLRNIANVMSASGCEVPSWITELRKMKWKKHRP 520
>ref|NP_001060473.1| Os07g0647900 [Oryza sativa Japonica Group]
gi|143456709|sp|Q5K5B6.2|RH57_ORYSJ RecName:
Full=DEAD-box ATP-dependent RNA helicase 57
gi|22093706|dbj|BAC07000.1| putative ATP-dependent RNA
helicase [Oryza sativa Japonica Group]
gi|23495827|dbj|BAC20037.1| putative ATP-dependent RNA
helicase [Oryza sativa Japonica Group]
gi|113612009|dbj|BAF22387.1| Os07g0647900 [Oryza sativa
Japonica Group] gi|125601315|gb|EAZ40891.1| hypothetical
protein OsJ_25369 [Oryza sativa Japonica Group]
Length = 540
Score = 674 bits (1738), Expect = 0.0
Identities = 342/521 (65%), Positives = 416/521 (79%), Gaps = 14/521 (2%)
Frame = -2
Query: 1798 ASFLFSGIHFDKKNIPGVFSISKGKREERDEVEAL-----EIEKVESEERMVSGKKRKRK 1634
+S LF+G HFD+K G F+ + D A + K +S+ + KKR+ +
Sbjct: 7 SSALFAGTHFDRKRFAGDFARFRQGPPAPDVASAAAPSPEKKRKRQSKAKAKKSKKRRAE 66
Query: 1633 TKDS--ERVEGFNVFKSSDSVPVAEEKEKVEDVG-------VREKKEYHRQIERDALLRK 1481
DS + VEGF+VFK + ++ EK + G VR +KE R+IER A+LRK
Sbjct: 67 GADSASDAVEGFSVFKGLAAKKDEDDSEKKVETGKSEDSEVVRRRKEVEREIERAAILRK 126
Query: 1480 KHGIHISGHNVPSPLQNFDDLSSRYGCKSYLFAKLAELGFKEPTPIQRQAIPVILSGREC 1301
K IHISG NVP+PL+NF++L SRYGC SYL L++LGF+EPTPIQRQAIP++LSGREC
Sbjct: 127 KFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGREC 186
Query: 1300 FACAPTGSGKTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXX 1121
FACAPTGSGKTLAFLFPILMK++PGSKEG++AVILCPTRELAAQTTREC
Sbjct: 187 FACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQTTRECKKLAKGRKFYI 246
Query: 1120 XLMTRDLAKNGSFQTMHCDIIVSTPFRMEFAIRKRKLDLSRVEYLVLDESDKLFELGYVK 941
LMT+DL+K+G+F+ MHCDI++STP R++ A++KR LDLSRVEYLVLDESDKLFELG+V+
Sbjct: 247 KLMTKDLSKSGNFKDMHCDILISTPLRLDHAVQKRDLDLSRVEYLVLDESDKLFELGFVE 306
Query: 940 QIDCVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFA 761
ID VVKACSNPSIIRSLFSATLPDS+E LARTIMHDAVRVIVGRKNSAS LI+QKL+FA
Sbjct: 307 VIDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIKQKLIFA 366
Query: 760 GSEYGKLIAIRQTFSESWNPPVLVFVQSIERAKQLYRELAFENIRVDIIHSDLSQIQRDN 581
G+E GKL+A+RQ+F+ES NPPVL+FVQS ERAK+LY+ELAF+++R D+IH+DL + QR +
Sbjct: 367 GTEKGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAFDDVRADVIHADLDEEQRQD 426
Query: 580 AVENFRAGKKWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAI 401
AV+N RAGK WVLIAT+VI+RGMDFKGVNCVINYD PESA+AYIHRIGR GRAGR G+AI
Sbjct: 427 AVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESASAYIHRIGRSGRAGRSGEAI 486
Query: 400 TFYTDTDVKFLRNIANVIAASGCEVPSWIMALPKLRRTKHR 278
TF+T+ D FLRNIANV+ +SGCEVPSWI ALPKL+R KHR
Sbjct: 487 TFFTEEDKPFLRNIANVLISSGCEVPSWIKALPKLKRKKHR 527