BLASTX nr result

ID: Coptis21_contig00009190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009190
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15634.3| unnamed protein product [Vitis vinifera]              301   3e-80
ref|XP_002283518.1| PREDICTED: nucleolar protein 56-like [Vitis ...   301   3e-80
ref|XP_002511213.1| nucleolar protein nop56, putative [Ricinus c...   294   6e-78
ref|XP_004165830.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar pr...   293   1e-77
ref|XP_004138057.1| PREDICTED: nucleolar protein 56-like [Cucumi...   293   1e-77

>emb|CBI15634.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score =  301 bits (772), Expect = 3e-80
 Identities = 150/165 (90%), Positives = 157/165 (95%)
 Frame = -1

Query: 496 HIFEETNIPCQSNEFVLELLRGVRQHFVRFIKDLKSSDMEKAQLGLGHSYSRAKVKFNVN 317
           HIFE+T IPCQSNEFVLELLRGVR HF RFIKDLK  D+EKAQLGLGHSYSRAKVKFNVN
Sbjct: 106 HIFEDTKIPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVN 165

Query: 316 RVDNMVIQAIFLLDTLDKDVNSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKYVKNKSE 137
           RVDNMVIQAIFLLDTLDKD+NSFSMRVREWYSWHFPELVKIVNDNYLYAKVAK+V+NK E
Sbjct: 166 RVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKFVENKLE 225

Query: 136 LSEDQIPDLTEILGDEDKAKEIVEAAKASMGQDLSVIDLINVEQF 2
           LSED+IP LTEILGDEDKAKEIVEAAKASMGQDLS IDLINV+QF
Sbjct: 226 LSEDKIPGLTEILGDEDKAKEIVEAAKASMGQDLSPIDLINVQQF 270


>ref|XP_002283518.1| PREDICTED: nucleolar protein 56-like [Vitis vinifera]
          Length = 558

 Score =  301 bits (772), Expect = 3e-80
 Identities = 150/165 (90%), Positives = 157/165 (95%)
 Frame = -1

Query: 496 HIFEETNIPCQSNEFVLELLRGVRQHFVRFIKDLKSSDMEKAQLGLGHSYSRAKVKFNVN 317
           HIFE+T IPCQSNEFVLELLRGVR HF RFIKDLK  D+EKAQLGLGHSYSRAKVKFNVN
Sbjct: 106 HIFEDTKIPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVN 165

Query: 316 RVDNMVIQAIFLLDTLDKDVNSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKYVKNKSE 137
           RVDNMVIQAIFLLDTLDKD+NSFSMRVREWYSWHFPELVKIVNDNYLYAKVAK+V+NK E
Sbjct: 166 RVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKFVENKLE 225

Query: 136 LSEDQIPDLTEILGDEDKAKEIVEAAKASMGQDLSVIDLINVEQF 2
           LSED+IP LTEILGDEDKAKEIVEAAKASMGQDLS IDLINV+QF
Sbjct: 226 LSEDKIPGLTEILGDEDKAKEIVEAAKASMGQDLSPIDLINVQQF 270


>ref|XP_002511213.1| nucleolar protein nop56, putative [Ricinus communis]
           gi|223550328|gb|EEF51815.1| nucleolar protein nop56,
           putative [Ricinus communis]
          Length = 558

 Score =  294 bits (752), Expect = 6e-78
 Identities = 142/165 (86%), Positives = 158/165 (95%)
 Frame = -1

Query: 496 HIFEETNIPCQSNEFVLELLRGVRQHFVRFIKDLKSSDMEKAQLGLGHSYSRAKVKFNVN 317
           HIFE T IPCQSNEFVLEL+RGVR HF RFIKDLK  D+EKAQLGLGHSYSRAKVKFNVN
Sbjct: 106 HIFEVTKIPCQSNEFVLELIRGVRLHFERFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVN 165

Query: 316 RVDNMVIQAIFLLDTLDKDVNSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKYVKNKSE 137
           RVDNMVIQAIFLLDTLDKD+NSFSMRVREWYSWHFPELVKIVNDNYLYAK+AK++++K++
Sbjct: 166 RVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKLAKFIEDKAK 225

Query: 136 LSEDQIPDLTEILGDEDKAKEIVEAAKASMGQDLSVIDLINVEQF 2
           LSE++IP+LT+ILGDEDKAKE+VEAAKASMGQDLS IDLINV+QF
Sbjct: 226 LSEEKIPELTDILGDEDKAKEVVEAAKASMGQDLSPIDLINVQQF 270


>ref|XP_004165830.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar protein 56-like [Cucumis
           sativus]
          Length = 552

 Score =  293 bits (749), Expect = 1e-77
 Identities = 143/165 (86%), Positives = 157/165 (95%)
 Frame = -1

Query: 496 HIFEETNIPCQSNEFVLELLRGVRQHFVRFIKDLKSSDMEKAQLGLGHSYSRAKVKFNVN 317
           +IFEET IPCQSNEFVLELLRGVR HF +FIKDLK  D+EKAQLGLGHSYSRAKVKFNVN
Sbjct: 107 NIFEETKIPCQSNEFVLELLRGVRLHFDKFIKDLKQGDLEKAQLGLGHSYSRAKVKFNVN 166

Query: 316 RVDNMVIQAIFLLDTLDKDVNSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKYVKNKSE 137
           RVDNMVIQAIFLLDTLDKD+NSFSMRVREWYSWHFPELVKIV DNYLYAK+AKY+++KS+
Sbjct: 167 RVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVGDNYLYAKLAKYIQDKSK 226

Query: 136 LSEDQIPDLTEILGDEDKAKEIVEAAKASMGQDLSVIDLINVEQF 2
           L+ED+IP LT+I+GDEDKAKEIVEAAKASMGQDLS IDLINV+QF
Sbjct: 227 LAEDKIPSLTDIIGDEDKAKEIVEAAKASMGQDLSDIDLINVQQF 271


>ref|XP_004138057.1| PREDICTED: nucleolar protein 56-like [Cucumis sativus]
          Length = 552

 Score =  293 bits (749), Expect = 1e-77
 Identities = 143/165 (86%), Positives = 157/165 (95%)
 Frame = -1

Query: 496 HIFEETNIPCQSNEFVLELLRGVRQHFVRFIKDLKSSDMEKAQLGLGHSYSRAKVKFNVN 317
           +IFEET IPCQSNEFVLELLRGVR HF +FIKDLK  D+EKAQLGLGHSYSRAKVKFNVN
Sbjct: 107 NIFEETKIPCQSNEFVLELLRGVRLHFDKFIKDLKQGDLEKAQLGLGHSYSRAKVKFNVN 166

Query: 316 RVDNMVIQAIFLLDTLDKDVNSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKYVKNKSE 137
           RVDNMVIQAIFLLDTLDKD+NSFSMRVREWYSWHFPELVKIV DNYLYAK+AKY+++KS+
Sbjct: 167 RVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVGDNYLYAKLAKYIQDKSK 226

Query: 136 LSEDQIPDLTEILGDEDKAKEIVEAAKASMGQDLSVIDLINVEQF 2
           L+ED+IP LT+I+GDEDKAKEIVEAAKASMGQDLS IDLINV+QF
Sbjct: 227 LAEDKIPSLTDIIGDEDKAKEIVEAAKASMGQDLSDIDLINVQQF 271


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