BLASTX nr result

ID: Coptis21_contig00009183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009183
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF97981.1|AC000103_31 F21J9.3 [Arabidopsis thaliana]              126   1e-54
ref|XP_003566164.1| PREDICTED: uncharacterized protein LOC100827...   134   6e-53
gb|EIE81232.1| hypothetical protein RO3G_05937 [Rhizopus delemar...   122   2e-52
gb|ABA95927.1| transposon protein, putative, Pong sub-class [Ory...   120   3e-52
gb|ABA96831.1| transposon protein, putative, Pong sub-class [Ory...   118   1e-51

>gb|AAF97981.1|AC000103_31 F21J9.3 [Arabidopsis thaliana]
          Length = 457

 Score =  126 bits (316), Expect(2) = 1e-54
 Identities = 64/104 (61%), Positives = 76/104 (73%)
 Frame = -3

Query: 635 FRTRFRMCQSLFEHIYFAVINHDNYFKQKCDAVGKLGLSSLQKITPAFRILAYGATADSV 456
           FR RFRM +SLF  IY A+  HDNYF Q+ D VGKLGLS LQK+T AFR+LAYG  ADS 
Sbjct: 2   FRRRFRMSRSLFLRIYDAIQRHDNYFVQRRDRVGKLGLSGLQKMTAAFRMLAYGVPADST 61

Query: 455 DEKIYIGQSTGLVCVKRFCRAIIEIFGDQYLSRSNTNDVEMLLY 324
           DE I IG+ST L  +KRFCRAI+E+F  +YL   + NDV  LL+
Sbjct: 62  DEYIKIGESTALESLKRFCRAIVEVFACRYLRSPDANDVARLLH 105



 Score =  113 bits (283), Expect(2) = 1e-54
 Identities = 48/72 (66%), Positives = 53/72 (73%)
 Frame = -2

Query: 333 ATILNKGEEHGFSGMLGSLDCMHWVWKNCPTNWAGQYTSRHGHATIILEVVASYDTWIWH 154
           A +L+ GE  GF  MLGSLDCMHW WKNCPT W GQY  R    TIILE VA YD WIWH
Sbjct: 101 ARLLHIGESRGFPRMLGSLDCMHWKWKNCPTAWGGQYAGRSRSPTIILEAVADYDLWIWH 160

Query: 153 AYFGVVGANNDV 118
           AYFG+ G+NND+
Sbjct: 161 AYFGLPGSNNDI 172


>ref|XP_003566164.1| PREDICTED: uncharacterized protein LOC100827873 [Brachypodium
           distachyon]
          Length = 423

 Score =  134 bits (336), Expect(2) = 6e-53
 Identities = 69/134 (51%), Positives = 86/134 (64%)
 Frame = -3

Query: 728 GRKVKNRPRGAAHDKLISDYFSNHSIFEDDDFRTRFRMCQSLFEHIYFAVINHDNYFKQK 549
           GR+V NR R A H +L  DYF+ H ++    FR RFRM + LF  I  A+  HD+YF QK
Sbjct: 45  GRQVINRDRVAGHGRLFEDYFTQHPVYGPSYFRRRFRMARPLFFRIVKAMREHDSYFVQK 104

Query: 548 CDAVGKLGLSSLQKITPAFRILAYGATADSVDEKIYIGQSTGLVCVKRFCRAIIEIFGDQ 369
            +A  KLGLSSLQK T  FR+L YG  AD+ DE + IG+ST L  +K F RA+IE+FGD+
Sbjct: 105 RNAARKLGLSSLQKATAVFRMLTYGVAADATDEYVRIGKSTALDSMKAFVRAVIEVFGDE 164

Query: 368 YLSRSNTNDVEMLL 327
           YL   N  D   LL
Sbjct: 165 YLRSPNDADTARLL 178



 Score =  100 bits (248), Expect(2) = 6e-53
 Identities = 41/72 (56%), Positives = 49/72 (68%)
 Frame = -2

Query: 333 ATILNKGEEHGFSGMLGSLDCMHWVWKNCPTNWAGQYTSRHGHATIILEVVASYDTWIWH 154
           A +L  GE  GF GMLGS+DCMHW WKNCP++W G YT      TI+LE V S D WIWH
Sbjct: 175 ARLLAIGENRGFPGMLGSIDCMHWGWKNCPSSWQGMYTGHVREPTIVLEAVVSLDLWIWH 234

Query: 153 AYFGVVGANNDV 118
            +FG  G+ ND+
Sbjct: 235 VFFGSPGSLNDI 246


>gb|EIE81232.1| hypothetical protein RO3G_05937 [Rhizopus delemar RA 99-880]
          Length = 433

 Score =  122 bits (305), Expect(2) = 2e-52
 Identities = 60/134 (44%), Positives = 88/134 (65%)
 Frame = -3

Query: 728 GRKVKNRPRGAAHDKLISDYFSNHSIFEDDDFRTRFRMCQSLFEHIYFAVINHDNYFKQK 549
           G KV NR R + H +L++DYFS    +++  FR RFRM +SLF  I  A+   D+ FKQK
Sbjct: 50  GHKVVNRDRVSGHRRLMADYFSQSPTYDERTFRRRFRMRRSLFLRILEAIQEKDHRFKQK 109

Query: 548 CDAVGKLGLSSLQKITPAFRILAYGATADSVDEKIYIGQSTGLVCVKRFCRAIIEIFGDQ 369
            D+ G  G S  QK+T A R LAYG +AD VDE +++ +S+ ++ +K FC A+I ++ D+
Sbjct: 110 YDSAGVAGFSPYQKMTAALRQLAYGYSADCVDEYLHMSESSAMMWLKLFCEAVISVYKDE 169

Query: 368 YLSRSNTNDVEMLL 327
           YL R N +D++ LL
Sbjct: 170 YLRRPNADDIKRLL 183



 Score =  110 bits (275), Expect(2) = 2e-52
 Identities = 46/70 (65%), Positives = 53/70 (75%)
 Frame = -2

Query: 327 ILNKGEEHGFSGMLGSLDCMHWVWKNCPTNWAGQYTSRHGHATIILEVVASYDTWIWHAY 148
           +L  GEE GF GM+GS+DC HWVWKNCPT W GQY  + G  TIILE VASYD WIWHA+
Sbjct: 182 LLAVGEERGFPGMIGSIDCTHWVWKNCPTAWHGQYIGKDGSPTIILEAVASYDLWIWHAF 241

Query: 147 FGVVGANNDV 118
           FG  G+ ND+
Sbjct: 242 FGSPGSLNDL 251


>gb|ABA95927.1| transposon protein, putative, Pong sub-class [Oryza sativa Japonica
           Group]
          Length = 450

 Score =  120 bits (300), Expect(2) = 3e-52
 Identities = 66/134 (49%), Positives = 81/134 (60%)
 Frame = -3

Query: 728 GRKVKNRPRGAAHDKLISDYFSNHSIFEDDDFRTRFRMCQSLFEHIYFAVINHDNYFKQK 549
           G  V NR R A H +L +DYFS    + D  FR RFRM + LF  I  A+  HD YF QK
Sbjct: 50  GHAVINRERLAGHRRLYNDYFSEEPTYLDVQFRRRFRMRRPLFLRIMNAIEAHDEYFVQK 109

Query: 548 CDAVGKLGLSSLQKITPAFRILAYGATADSVDEKIYIGQSTGLVCVKRFCRAIIEIFGDQ 369
            +A G LGLS LQK+T   R+L YG  AD+VDE + IG ST +    RF  AI E+FG++
Sbjct: 110 RNAAGVLGLSCLQKVTAVSRMLCYGIAADAVDEYVRIGGSTVIESFNRFVVAIDEVFGEE 169

Query: 368 YLSRSNTNDVEMLL 327
           YL   N ND+  LL
Sbjct: 170 YLRTPNENDIARLL 183



 Score =  111 bits (278), Expect(2) = 3e-52
 Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
 Frame = -2

Query: 333 ATILNKGEEHGFSGMLGSLDCMHWVWKNCPTNWAGQYTSRHGHATIILEVVASYDTWIWH 154
           A +L +GEE GF GMLGSLDCMHW WKNCPT W GQY  + G  TI+LE VAS D W WH
Sbjct: 180 ARLLAQGEERGFPGMLGSLDCMHWQWKNCPTAWQGQYKGKEGVPTIVLEAVASRDRWFWH 239

Query: 153 AYFGVVGANNDV-MCWNLPIYFKI 85
           A+FG  G++ND+ +    P++ K+
Sbjct: 240 AFFGSPGSHNDINVLQRSPLFAKL 263


>gb|ABA96831.1| transposon protein, putative, Pong sub-class [Oryza sativa Japonica
           Group]
          Length = 511

 Score =  118 bits (295), Expect(2) = 1e-51
 Identities = 65/134 (48%), Positives = 80/134 (59%)
 Frame = -3

Query: 728 GRKVKNRPRGAAHDKLISDYFSNHSIFEDDDFRTRFRMCQSLFEHIYFAVINHDNYFKQK 549
           G  V NR R A H +L +DYFS    + D  FR RFRM + LF  I  A+  HD YF QK
Sbjct: 111 GHAVINRERLAGHRRLYNDYFSEEPTYLDVQFRHRFRMRRPLFLRIMNAIEAHDEYFVQK 170

Query: 548 CDAVGKLGLSSLQKITPAFRILAYGATADSVDEKIYIGQSTGLVCVKRFCRAIIEIFGDQ 369
            +  G LGLS LQK+T   R+L YG  AD+VDE + IG ST +    RF  AI E+FG++
Sbjct: 171 RNVAGVLGLSCLQKVTAVSRMLCYGIAADAVDEYVRIGGSTVIESFNRFVVAIDEVFGEE 230

Query: 368 YLSRSNTNDVEMLL 327
           YL   N ND+  LL
Sbjct: 231 YLRTPNENDIARLL 244



 Score =  111 bits (278), Expect(2) = 1e-51
 Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
 Frame = -2

Query: 333 ATILNKGEEHGFSGMLGSLDCMHWVWKNCPTNWAGQYTSRHGHATIILEVVASYDTWIWH 154
           A +L +GEE GF GMLGSLDCMHW WKNCPT W GQY  + G  TI+LE VAS D W WH
Sbjct: 241 ARLLAQGEERGFPGMLGSLDCMHWQWKNCPTAWQGQYKGKEGVPTIVLEAVASRDRWFWH 300

Query: 153 AYFGVVGANNDV-MCWNLPIYFKI 85
           A+FG  G++ND+ +    P++ K+
Sbjct: 301 AFFGSPGSHNDINVLQRSPLFAKL 324