BLASTX nr result

ID: Coptis21_contig00009147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009147
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]      122   4e-26
ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus ...   121   5e-26
ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_002880484.1| armadillo/beta-catenin repeat family protein...   118   4e-25

>ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|222831845|gb|EEE70322.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score =  122 bits (305), Expect = 4e-26
 Identities = 64/79 (81%), Positives = 70/79 (88%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   GIPVLVDAVELGSTRVKEHAAAALLQLCTNSSRFCGMVLQQGPVPPLVALSQSGSPRAKE 182
           GIPVLV+ VELGS R KE+AAAALLQLCTNSSRFC MVLQ+G VPPLVALSQSG+PRAKE
Sbjct: 620 GIPVLVEVVELGSVRGKENAAAALLQLCTNSSRFCHMVLQEGAVPPLVALSQSGTPRAKE 679

Query: 183 KAHALLNYFRNQRR-NARR 236
           KA +LL+YFRNQR  NA R
Sbjct: 680 KAQSLLSYFRNQRHGNAGR 698


>gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]
          Length = 790

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/80 (78%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   GIPVLVDAVELGSTRVKEHAAAALLQLCTNSSRFCGMVLQQGPVPPLVALSQSGSPRAKE 182
           GIP+LV+ VELGS R KE+AAAALLQLCTNSSRFC MVLQ+G VPPLVALSQSG+PRA+E
Sbjct: 711 GIPLLVEVVELGSARGKENAAAALLQLCTNSSRFCNMVLQEGAVPPLVALSQSGTPRARE 770

Query: 183 KAHALLNYFRNQRR-NARRG 239
           KA  LL+YFRNQR  NA RG
Sbjct: 771 KAQQLLSYFRNQRHGNAGRG 790


>ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223535790|gb|EEF37452.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 799

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/79 (77%), Positives = 68/79 (86%)
 Frame = +3

Query: 3   GIPVLVDAVELGSTRVKEHAAAALLQLCTNSSRFCGMVLQQGPVPPLVALSQSGSPRAKE 182
           GIPVLV+ VELGS R KE+AAAALLQLCTNS+RFC  VLQ+G VPPLVALSQSG+PRAKE
Sbjct: 721 GIPVLVEVVELGSARGKENAAAALLQLCTNSNRFCNTVLQEGAVPPLVALSQSGTPRAKE 780

Query: 183 KAHALLNYFRNQRRNARRG 239
           KA ALL++FRNQR    RG
Sbjct: 781 KAQALLSFFRNQRHGNARG 799


>ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|222855944|gb|EEE93491.1|
           predicted protein [Populus trichocarpa]
          Length = 822

 Score =  121 bits (304), Expect = 5e-26
 Identities = 64/79 (81%), Positives = 70/79 (88%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   GIPVLVDAVELGSTRVKEHAAAALLQLCTNSSRFCGMVLQQGPVPPLVALSQSGSPRAKE 182
           GIPVLV+ VELGS R KE+AAAALLQLCTNSSRFC MVLQ+G VPPLVALSQSG+PRAKE
Sbjct: 743 GIPVLVEVVELGSARGKENAAAALLQLCTNSSRFCHMVLQEGAVPPLVALSQSGTPRAKE 802

Query: 183 KAHALLNYFRNQRR-NARR 236
           KA ALL++FRNQR  NA R
Sbjct: 803 KAQALLSFFRNQRHGNAGR 821


>ref|XP_002880484.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326323|gb|EFH56743.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 829

 Score =  118 bits (296), Expect = 4e-25
 Identities = 62/80 (77%), Positives = 69/80 (86%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   GIPVLVDAVELGSTRVKEHAAAALLQLCTNSSRFCGMVLQQGPVPPLVALSQSGSPRAKE 182
           GIP+LV+ VELGS R KE+AAAALLQL TNS RFC MVLQ+G VPPLVALSQSG+PRA+E
Sbjct: 750 GIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRARE 809

Query: 183 KAHALLNYFRNQRR-NARRG 239
           KA ALL+YFRNQR  NA RG
Sbjct: 810 KAQALLSYFRNQRHGNAGRG 829


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