BLASTX nr result

ID: Coptis21_contig00009129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009129
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|2...    84   5e-14
ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|2...    79   1e-12
ref|XP_002514322.1| conserved hypothetical protein [Ricinus comm...    79   2e-12
ref|XP_003629642.1| hypothetical protein MTR_8g083460 [Medicago ...    63   8e-08
ref|XP_002894376.1| hypothetical protein ARALYDRAFT_474355 [Arab...    56   9e-06

>ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|222865848|gb|EEF02979.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 43/81 (53%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +3

Query: 354 MCHP-GLPFVSYEEKTVQSTWLALQVAAVVDAINRQEGASRQADGGGVAGSTKQCLCSPT 530
           MCHP G+P+VS     V   WL LQ           E A+       VAGS K+CLCSPT
Sbjct: 1   MCHPPGVPWVS-RNLVVYRRWLVLQAVETETGHAPTEVAA--TGSSAVAGSIKKCLCSPT 57

Query: 531 QHPGSFRCRHHQADYQWGGRI 593
           +HPGSFRCRHH++DY WGGRI
Sbjct: 58  RHPGSFRCRHHRSDYVWGGRI 78


>ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|222873229|gb|EEF10360.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 38/80 (47%), Positives = 47/80 (58%)
 Frame = +3

Query: 354 MCHPGLPFVSYEEKTVQSTWLALQVAAVVDAINRQEGASRQADGGGVAGSTKQCLCSPTQ 533
           MCHPG+  VS     V    L LQ      +  R E A+    G  ++ S  +CLCSPT+
Sbjct: 1   MCHPGVLSVSQRNLVVYQRRLVLQAVETETSHARTEVAA--GGGSAISRSINKCLCSPTR 58

Query: 534 HPGSFRCRHHQADYQWGGRI 593
           HPGSFRCRHH++DY W GRI
Sbjct: 59  HPGSFRCRHHRSDYVWSGRI 78


>ref|XP_002514322.1| conserved hypothetical protein [Ricinus communis]
           gi|223546778|gb|EEF48276.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 38/87 (43%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
 Frame = +3

Query: 354 MCHPGLPFVSYEEKTVQSTWLALQVAAVVDAINRQE-------GASRQADGGGVAGSTKQ 512
           MC+  +P  S+     +  WL L+   +V      E        A+  AD GG  GS K 
Sbjct: 1   MCNQVVPLNSHRALAEEQRWLLLRAVQLVTEQAGTETANAAAASAAGSADAGGGGGSIKM 60

Query: 513 CLCSPTQHPGSFRCRHHQADYQWGGRI 593
           C+CSPT+HPGSFRCRHH  DY WG RI
Sbjct: 61  CVCSPTRHPGSFRCRHHHVDYAWGRRI 87


>ref|XP_003629642.1| hypothetical protein MTR_8g083460 [Medicago truncatula]
           gi|357521031|ref|XP_003630804.1| hypothetical protein
           MTR_8g103600 [Medicago truncatula]
           gi|355523664|gb|AET04118.1| hypothetical protein
           MTR_8g083460 [Medicago truncatula]
           gi|355524826|gb|AET05280.1| hypothetical protein
           MTR_8g103600 [Medicago truncatula]
          Length = 83

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 39/86 (45%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
 Frame = +3

Query: 354 MCHPGLPFVSYEEKTVQSTWLALQVAAVVDAINRQEGA---SRQADGGGVA----GSTKQ 512
           MCH G  F  Y    V       +V  VVD +  +E     + QA GGG      GS KQ
Sbjct: 1   MCHEGF-FPLYTRCRVFR-----EVQIVVDTVAGEEPVVVVAGQARGGGDRAGEDGSIKQ 54

Query: 513 CLCSPTQHPGSFRCRHHQADYQWGGR 590
           C+CSP++HPGSFRCR HQA Y W  R
Sbjct: 55  CVCSPSKHPGSFRCRQHQAKYVWRNR 80


>ref|XP_002894376.1| hypothetical protein ARALYDRAFT_474355 [Arabidopsis lyrata subsp.
           lyrata] gi|297340218|gb|EFH70635.1| hypothetical protein
           ARALYDRAFT_474355 [Arabidopsis lyrata subsp. lyrata]
          Length = 80

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
 Frame = +3

Query: 354 MCHPGLP-FVSYEEKTVQSTWLALQVAAVVDAINRQEGASRQADGGGVAGSTKQCLCSPT 530
           MC+  LP  V   E   ++T     VA V  A   +  A  ++ GGG     K+C+CSP+
Sbjct: 1   MCYKILPPLVILPENFHENT----TVAEVTAATEVEASAGHRSGGGG----KKKCVCSPS 52

Query: 531 QHPGSFRCRHHQADYQW 581
           +HP SF+CR+HQ +YQW
Sbjct: 53  KHPRSFKCRYHQHEYQW 69


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