BLASTX nr result

ID: Coptis21_contig00009117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009117
         (1340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30297.3| unnamed protein product [Vitis vinifera]              229   2e-57
emb|CAN62761.1| hypothetical protein VITISV_021811 [Vitis vinifera]   225   2e-56
ref|XP_002528749.1| conserved hypothetical protein [Ricinus comm...   201   5e-49
ref|XP_002301703.1| predicted protein [Populus trichocarpa] gi|2...   178   3e-42
ref|XP_002305863.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-41

>emb|CBI30297.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  229 bits (583), Expect = 2e-57
 Identities = 134/287 (46%), Positives = 179/287 (62%), Gaps = 15/287 (5%)
 Frame = +3

Query: 3   TDEKLLTLLDYHRRDLATALGTTKWQLEDFERAVSLSA----SNVREDVISRHTHFIRAI 170
           +D KLLT ++YHRRDLAT L T KWQLEDFERAVSLSA    S +REDVISRH  FIRAI
Sbjct: 46  SDPKLLTSIEYHRRDLATTLETAKWQLEDFERAVSLSAATDKSRMREDVISRHKQFIRAI 105

Query: 171 QDQVFQVERSL---GKGVSERNS---HLNEKDEDGLALFLSGGNPVDPTLSEYDSDSSVM 332
           ++Q+  VE+SL     G S RN+   +LNE+D DGLALFLSG +P +        DS+++
Sbjct: 106 REQIVHVEKSLLDSSMGNSVRNTEWINLNEQDRDGLALFLSGQDPTEQVPRYEKEDSTIL 165

Query: 333 RRFLDSTKPSGFN---DEIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTR 503
           RRFLD    S +N   DEI+E +T E E+      MH+DH F + KE KLR V S+Y  +
Sbjct: 166 RRFLDPVTTSSYNDSTDEIVEQKTRESENLNMARAMHVDHDFKSSKEGKLRNVGSHYPAQ 225

Query: 504 PGFETVISIQDSSKNNEG--GSWELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYA 677
             FE   ++QD++    G  GSW+LE   +  K+ F K+  RG  +R+ +F FL N+W A
Sbjct: 226 LSFEAPEALQDTAGGKHGGDGSWDLEADGAKDKSFFHKDG-RGYHNRMGIFCFLANLWPA 284

Query: 678 YGDKMAKSFAKRRKDGEVIGDFDQNPSSSYADILQAEQGTYSWMGFA 818
           YG +++++F KR KDGE     +Q+ S S  D+     G  + M  A
Sbjct: 285 YGSRVSRNFTKRLKDGE-----EQSHSPSQMDVSHGAPGHQARMRLA 326


>emb|CAN62761.1| hypothetical protein VITISV_021811 [Vitis vinifera]
          Length = 346

 Score =  225 bits (573), Expect = 2e-56
 Identities = 130/273 (47%), Positives = 174/273 (63%), Gaps = 15/273 (5%)
 Frame = +3

Query: 3   TDEKLLTLLDYHRRDLATALGTTKWQLEDFERAVSLSA----SNVREDVISRHTHFIRAI 170
           +D KLLT ++YHRRDLAT L T KWQLEDFERAVSLSA    S +REDVISRH  FIRAI
Sbjct: 46  SDPKLLTSIEYHRRDLATTLETAKWQLEDFERAVSLSAATDKSRMREDVISRHKQFIRAI 105

Query: 171 QDQVFQVERSL---GKGVSERNS---HLNEKDEDGLALFLSGGNPVDPTLSEYDSDSSVM 332
           ++Q+  VE+SL     G S RN+   +LNE+D DGLALFLSG +P +        DS+++
Sbjct: 106 REQIVHVEKSLLDSSMGNSVRNTEWINLNEQDRDGLALFLSGQDPTEQVPRYEKEDSTIL 165

Query: 333 RRFLDSTKPSGFN---DEIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTR 503
           RRFLD    S +N   DEI+E +T E E+      MH+DH F + KE KLR V S+Y  +
Sbjct: 166 RRFLDPVTTSSYNDSTDEIVEQKTRESENLNMARAMHVDHDFKSSKEGKLRNVGSHYPAQ 225

Query: 504 PGFETVISIQDSSKNNEGG--SWELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYA 677
             FE   ++ D++    GG  SW+LE   +  K+ F K+  RG  +R+ +F FL N+W A
Sbjct: 226 LSFEAPEALXDTAGGKHGGDXSWDLEADGAKDKSFFHKDG-RGYHNRMGIFCFLANLWPA 284

Query: 678 YGDKMAKSFAKRRKDGEVIGDFDQNPSSSYADI 776
           YG +++++F KR KDGE     +Q+ S S  D+
Sbjct: 285 YGSRVSRNFTKRLKDGE-----EQSHSPSQMDV 312


>ref|XP_002528749.1| conserved hypothetical protein [Ricinus communis]
           gi|223531843|gb|EEF33661.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score =  201 bits (510), Expect = 5e-49
 Identities = 132/303 (43%), Positives = 174/303 (57%), Gaps = 13/303 (4%)
 Frame = +3

Query: 6   DEKLLTLLDYHRRDLATALGTTKWQLEDFERAVSLSA----SNVREDVISRHTHFIRAIQ 173
           D +LL  ++YHRRDLAT L T KWQLEDFERAV  SA    S  REDVISRH  FIRAI+
Sbjct: 47  DPRLLMSIEYHRRDLATILETAKWQLEDFERAVHFSAVQDKSRSREDVISRHRQFIRAIR 106

Query: 174 DQVFQVERSL---GKGVSERNS---HLNEKDEDGLALFLSGGNPVDPTLSEYDSDSSVMR 335
           +QV  VE S+     G S RN+   +LNE+D DGLALFL GGN    +      DSS++R
Sbjct: 107 EQVNHVENSVAGPALGDSMRNTEWGNLNEQDRDGLALFLIGGNTAGHSNHYEMEDSSILR 166

Query: 336 RFLDSTKPSGFND-EIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPGF 512
           RFLD T  S   D EI+E  + E E  + +G +  D S    K++  +K+ S+Y TR G 
Sbjct: 167 RFLDPTSASSLTDNEIVEHGSVEFEKLKLSGNVQADDSAS--KDDYFKKLGSHYTTRLGS 224

Query: 513 ETVISIQDSSKN--NEGGSWELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYGD 686
           +    +QD S N   +GG W+LE  ++  KN+F +N  R   SR++ F FL N+W  +G 
Sbjct: 225 D----LQDISCNRPGDGGHWDLEADEATPKNVFHENSSR--YSRMNFFGFLNNLWKMWGT 278

Query: 687 KMAKSFAKRRKDGEVIGDFDQNPSSSYADILQAEQGTYSWMGFASVPSSWFGYYKRFYLR 866
           K+ KS+ KR KDGE     +Q  S +Y D+  + QG +      S   S  G   RF   
Sbjct: 279 KVTKSYIKRLKDGE-----EQRHSPTYIDVSYSAQGQHMGPSLGSRCRSLTGLCSRFRAN 333

Query: 867 LQL 875
           L +
Sbjct: 334 LMI 336


>ref|XP_002301703.1| predicted protein [Populus trichocarpa] gi|222843429|gb|EEE80976.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  178 bits (451), Expect = 3e-42
 Identities = 112/276 (40%), Positives = 165/276 (59%), Gaps = 13/276 (4%)
 Frame = +3

Query: 6   DEKLLTLLDYHRRDLATALGTTKWQLEDFERAVSLSA----SNVREDVISRHTHFIRAIQ 173
           D +LL+ ++YH+RDLAT LGT KWQLEDFERAV+ S+    S  REDVISRH  FI AI+
Sbjct: 47  DPRLLSSIEYHKRDLATILGTAKWQLEDFERAVNSSSIANKSQAREDVISRHRQFIIAIR 106

Query: 174 DQVFQVERSL-GKGV--SERNS---HLNEKDEDGLALFLSGGNPVDPTLSEYDSDSSVMR 335
           + + +VE+S+ G+ +  S RNS   +LN++D D LA FL+GGNP +        +SS++R
Sbjct: 107 EHINEVEKSVKGRSMDDSMRNSEWVNLNDQDRDVLASFLTGGNPTENMHPYEMEESSILR 166

Query: 336 RFLDSTKPSGFND-EIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPGF 512
           RFLD        D EI+E  + E E  +  GV H DH  D+  E+K R VAS+  T  G 
Sbjct: 167 RFLDPNSGVSLKDNEIVEHDSREFERVKMTGVGHADHYLDSANEDK-RNVASHNSTGLGS 225

Query: 513 ETVISIQDSSKNNEGGS--WELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYGD 686
           + + S Q+   +   G   W+LE  ++ +++ F + K RG  S +  F FL N+W A+ +
Sbjct: 226 DMMNSRQEIHHDRHVGDDHWDLEANEAKSRSFFHEIKSRGIYSIMIFFGFLSNLWTAHRN 285

Query: 687 KMAKSFAKRRKDGEVIGDFDQNPSSSYADILQAEQG 794
           ++ +++ KR KDGE     +   S +Y +   + QG
Sbjct: 286 RVGRNYTKRLKDGE-----EYRHSPTYTESSHSAQG 316


>ref|XP_002305863.1| predicted protein [Populus trichocarpa] gi|222848827|gb|EEE86374.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  176 bits (445), Expect = 2e-41
 Identities = 107/255 (41%), Positives = 158/255 (61%), Gaps = 14/255 (5%)
 Frame = +3

Query: 6   DEKLLTLLDYHRRDLATALGTTKWQLEDFERAVSLS----ASNVREDVISRHTHFIRAIQ 173
           D + L+ ++YH+RDLAT LGT KWQLEDFERA + S     S  REDVISRH  FI AI+
Sbjct: 47  DPRFLSSIEYHKRDLATILGTAKWQLEDFERAANSSIIANKSQTREDVISRHRQFIMAIR 106

Query: 174 DQVFQVERSL---GKGVSERNS---HLNEKDEDGLALFLSGGNPVDPTLSEYD-SDSSVM 332
           + + +VE+ +     G S RNS   +LN+ + D LA FL+GGNP +  L+ Y+  +S  +
Sbjct: 107 EHINEVEKGVKGPSMGDSMRNSEWVNLNDHERDLLASFLTGGNPKE-HLNHYEMEESGYL 165

Query: 333 RRFLDSTKPSGFND-EIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPG 509
           RRFLD    S   D EI+E  + E E  R NGV H +H  D+  E+K R + S+Y TR G
Sbjct: 166 RRFLDPNLGSSLTDNEIVEHDSREFERVRINGVGHAEHYLDSANEDK-RNIGSHYTTRLG 224

Query: 510 FETVISIQDSSKNNEGGS--WELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYG 683
            + + S+ ++S    GG   W+L+  ++ +++ F + K RG+ S +  F FL N+W  + 
Sbjct: 225 SDMMNSLPENSHERHGGGDHWDLKANEAKSRSFFHEIKSRGTYS-IMFFGFLINLWSTHR 283

Query: 684 DKMAKSFAKRRKDGE 728
           +++A+++ KR KDGE
Sbjct: 284 NRIARNYTKRLKDGE 298


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