BLASTX nr result

ID: Coptis21_contig00009103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009103
         (1410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48146.1| unknown [Medicago truncatula]                          585   e-164
sp|B7FM45.1|LIAS_MEDTR RecName: Full=Lipoyl synthase, mitochondr...   583   e-164
gb|AFK43632.1| unknown [Medicago truncatula]                          582   e-164
gb|ABK96318.1| unknown [Populus trichocarpa x Populus deltoides]      581   e-163
ref|XP_002306361.1| predicted protein [Populus trichocarpa] gi|3...   580   e-163

>gb|AFK48146.1| unknown [Medicago truncatula]
          Length = 378

 Score =  585 bits (1507), Expect = e-164
 Identities = 288/376 (76%), Positives = 324/376 (86%), Gaps = 3/376 (0%)
 Frame = -1

Query: 1392 MYPRFIPIIRTLKSSNRTFC---SSTSTQIPKPEYPTTRISDLRQRLSTESPTLSDFIKL 1222
            MY RF  + + LKS+++ F    ++T+T +   E+P   +++LR RL+ ESP+LSDFI L
Sbjct: 2    MYSRFRTVAKNLKSTSKPFSFTTATTTTTVSSSEFPQN-LTELRARLARESPSLSDFISL 60

Query: 1221 RDNESYSVEVGTXXXXXXXXXXXKESIPGGEKYAKIKKKLRELNLHTVCEEAKCPNLGEC 1042
            + N +YSVEVGT           KESIPGG KY +IKKKLREL LHTVCEEAKCPN+GEC
Sbjct: 61   KSNNAYSVEVGTKKNPLPKPKWMKESIPGGWKYVQIKKKLRELKLHTVCEEAKCPNMGEC 120

Query: 1041 WSGGETGTATATIMILGDTCTRGCRFCNVKTSRNPLPPDPNEPSNVAEAIASWGLDYIVI 862
            WSGGETGTATATIMILGDTCTRGCRFCNVKTSR P PPDP+EP+NVAEAIASWGLDY+VI
Sbjct: 121  WSGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPDEPTNVAEAIASWGLDYVVI 180

Query: 861  TSVDRDDLPDQGSGHFVETVQKLKILKPDILIEALVPDFRGDRSCVEKVSQSGLDVLAHN 682
            TSVDRDDLPDQGS HF ETVQKLKILKP ILIEALVPDFRG+  CVEKVS+SGLDV AH+
Sbjct: 181  TSVDRDDLPDQGSSHFTETVQKLKILKPSILIEALVPDFRGNAECVEKVSKSGLDVFAHS 240

Query: 681  IETVEELQSVVRDHRANFKQSMEVLKMAKDFAPVGTLTKTSIMLGCGETPDQVVRTMEKV 502
            IETVEELQS VRDHRANF QS++VL+MAKD+AP GTLTKTSIMLGCGETPDQ+V+TMEKV
Sbjct: 241  IETVEELQSAVRDHRANFNQSLDVLRMAKDYAPAGTLTKTSIMLGCGETPDQIVKTMEKV 300

Query: 501  RDAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEQYRILGTEMGFRYIASGPMVRSSYKAG 322
            R AGVDVMTFGQYMRPSKRHMPVSEYITPEAFE+Y+ LG EMGFRY+ASGPMVRSSYKAG
Sbjct: 301  RAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQALGMEMGFRYVASGPMVRSSYKAG 360

Query: 321  EFYIKSMIEKDRAIPS 274
            EFYIKSMI+ DRA+ S
Sbjct: 361  EFYIKSMIDSDRAVSS 376


>sp|B7FM45.1|LIAS_MEDTR RecName: Full=Lipoyl synthase, mitochondrial; AltName: Full=Lipoate
            synthase; Short=LS; Short=Lip-syn; AltName: Full=Lipoic
            acid synthase; Flags: Precursor
            gi|217074936|gb|ACJ85828.1| unknown [Medicago truncatula]
          Length = 378

 Score =  583 bits (1504), Expect = e-164
 Identities = 288/376 (76%), Positives = 322/376 (85%), Gaps = 3/376 (0%)
 Frame = -1

Query: 1392 MYPRFIPIIRTLKSSNRTFC---SSTSTQIPKPEYPTTRISDLRQRLSTESPTLSDFIKL 1222
            MY RF  + + LKS+ + F    ++T+T +   E+P   +++LR RL+ ESP+LSDFI L
Sbjct: 2    MYSRFRTVAKNLKSTTKPFSFTTATTTTTVSSSEFPQN-LTELRARLARESPSLSDFISL 60

Query: 1221 RDNESYSVEVGTXXXXXXXXXXXKESIPGGEKYAKIKKKLRELNLHTVCEEAKCPNLGEC 1042
            + N +YSVEVGT           KESIPGG KY +IKKKLREL LHTVCEEAKCPN+GEC
Sbjct: 61   KSNNAYSVEVGTKKNPLPKPKWMKESIPGGWKYVQIKKKLRELKLHTVCEEAKCPNMGEC 120

Query: 1041 WSGGETGTATATIMILGDTCTRGCRFCNVKTSRNPLPPDPNEPSNVAEAIASWGLDYIVI 862
            WSGGETGTATATIMILGDTCTRGCRFCNVKTSR P PPDP+EP+NVAEAIASWGLDY+VI
Sbjct: 121  WSGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPDEPTNVAEAIASWGLDYVVI 180

Query: 861  TSVDRDDLPDQGSGHFVETVQKLKILKPDILIEALVPDFRGDRSCVEKVSQSGLDVLAHN 682
            TSV RDDLPDQGS HF ETVQKLKILKP ILIEALVPDFRG+  CVEKVS+SGLDV AHN
Sbjct: 181  TSVGRDDLPDQGSSHFTETVQKLKILKPSILIEALVPDFRGNAECVEKVSKSGLDVFAHN 240

Query: 681  IETVEELQSVVRDHRANFKQSMEVLKMAKDFAPVGTLTKTSIMLGCGETPDQVVRTMEKV 502
            IETVEELQS VRDHRANF QS++VL+MAKD+AP GTLTKTSIMLGCGETPDQ+V+TMEKV
Sbjct: 241  IETVEELQSAVRDHRANFNQSLDVLRMAKDYAPAGTLTKTSIMLGCGETPDQIVKTMEKV 300

Query: 501  RDAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEQYRILGTEMGFRYIASGPMVRSSYKAG 322
            R AGVDVMTFGQYMRPSKRHMPVSEYITPEAFE+Y+ LG EMGFRY+ASGPMVRSSYKAG
Sbjct: 301  RAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQTLGMEMGFRYVASGPMVRSSYKAG 360

Query: 321  EFYIKSMIEKDRAIPS 274
            EFYIKSMI+ DRA+ S
Sbjct: 361  EFYIKSMIDSDRAVSS 376


>gb|AFK43632.1| unknown [Medicago truncatula]
          Length = 378

 Score =  582 bits (1501), Expect = e-164
 Identities = 287/374 (76%), Positives = 321/374 (85%), Gaps = 3/374 (0%)
 Frame = -1

Query: 1392 MYPRFIPIIRTLKSSNRTFC---SSTSTQIPKPEYPTTRISDLRQRLSTESPTLSDFIKL 1222
            MY RF  + + LKS+ + F    ++T+T +   E+P   +++LR RL+ ESP+LSDFI L
Sbjct: 2    MYSRFRTVAKNLKSTTKPFSFTTATTTTTVSSSEFPQN-LTELRARLARESPSLSDFISL 60

Query: 1221 RDNESYSVEVGTXXXXXXXXXXXKESIPGGEKYAKIKKKLRELNLHTVCEEAKCPNLGEC 1042
            + N +YSVEVGT           KESIPGG KY +IKKKLREL LHTVCEEAKCPN+GEC
Sbjct: 61   KSNNAYSVEVGTKKNPLPKPKWMKESIPGGWKYVQIKKKLRELKLHTVCEEAKCPNMGEC 120

Query: 1041 WSGGETGTATATIMILGDTCTRGCRFCNVKTSRNPLPPDPNEPSNVAEAIASWGLDYIVI 862
            WSGGETGTATATIMILGDTCTRGCRFCNVKTSR P PPDP+EP+NVAEAIASWGLDY+VI
Sbjct: 121  WSGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPDEPTNVAEAIASWGLDYVVI 180

Query: 861  TSVDRDDLPDQGSGHFVETVQKLKILKPDILIEALVPDFRGDRSCVEKVSQSGLDVLAHN 682
            TSV RDDLPDQGS HF ETVQKLKILKP ILIEALVPDFRG+  CVEKVS+SGLDV AHN
Sbjct: 181  TSVGRDDLPDQGSSHFTETVQKLKILKPSILIEALVPDFRGNAECVEKVSKSGLDVFAHN 240

Query: 681  IETVEELQSVVRDHRANFKQSMEVLKMAKDFAPVGTLTKTSIMLGCGETPDQVVRTMEKV 502
            IETVEELQS VRDHRANF QS++VL+MAKD+AP GTLTKTSIMLGCGETPDQ+V+TMEKV
Sbjct: 241  IETVEELQSAVRDHRANFNQSLDVLRMAKDYAPAGTLTKTSIMLGCGETPDQIVKTMEKV 300

Query: 501  RDAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEQYRILGTEMGFRYIASGPMVRSSYKAG 322
            R AGVDVMTFGQYMRPSKRHMPVSEYITPEAFE+Y+ LG EMGFRY+ASGPMVRSSYKAG
Sbjct: 301  RAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQTLGMEMGFRYVASGPMVRSSYKAG 360

Query: 321  EFYIKSMIEKDRAI 280
            EFYIKSMI+ DRA+
Sbjct: 361  EFYIKSMIDSDRAV 374


>gb|ABK96318.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 385

 Score =  581 bits (1497), Expect = e-163
 Identities = 292/371 (78%), Positives = 322/371 (86%), Gaps = 4/371 (1%)
 Frame = -1

Query: 1362 TLKSSNRTFCSST---STQIPKPEYPTTRISDLRQRLSTESPTLSDFIKLRDNESYSVEV 1192
            T K+ NRTF SST   ST+ P P++  T ++ LR RL+ ESPTLSDFI L+ N +YSVEV
Sbjct: 17   TTKAKNRTFSSSTVESSTKQP-PQFSQT-LAGLRARLAVESPTLSDFIHLQSNNTYSVEV 74

Query: 1191 GTXXXXXXXXXXXKESIPGGEKYAKIKKKLRELNLHTVCEEAKCPNLGECWSGGETGTAT 1012
            GT           +E+IPGGEKY  IKKKLREL LHTVCEEAKCPNLGECWSGGETGTAT
Sbjct: 75   GTKKKPLPKPKWMREAIPGGEKYVHIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTAT 134

Query: 1011 ATIMILGDTCTRGCRFCNVKTSRNPLPPDPNEPSNVAEAIASWGLDYIVITSVDRDDLPD 832
            ATIMILGDTCTRGCRFCNVKTSR P PPDPNEP+NVAEAIASWGLDY+VITSVDRDDL D
Sbjct: 135  ATIMILGDTCTRGCRFCNVKTSRKPPPPDPNEPTNVAEAIASWGLDYVVITSVDRDDLAD 194

Query: 831  QGSGHFVETVQKLKILKPDILIEALVPDFRGDRSCVEKVSQSGLDVLAHNIETVEELQSV 652
            QGSGHF ETV KLK LKP++LIEALVPDFRGDR CVEKV++SGLDV AHNIETVEELQS 
Sbjct: 195  QGSGHFAETVHKLKTLKPNMLIEALVPDFRGDRGCVEKVAKSGLDVFAHNIETVEELQSS 254

Query: 651  VRDHRANFKQSMEVLKMAKDFAPVGTLTKTSIMLGCGETPDQVVRTMEKVRDAGVDVMTF 472
            VRDHRANFKQS++VL MAK++AP GTLTKTSIMLGCGE P+QVV+TMEKVR AGVDVMTF
Sbjct: 255  VRDHRANFKQSLDVLMMAKEYAPPGTLTKTSIMLGCGEAPEQVVKTMEKVRAAGVDVMTF 314

Query: 471  GQYMRPSKRHMPVSEYITPEAFEQYRILGTEMGFRYIASGPMVRSSYKAGEFYIKSMIEK 292
            GQYMRPSKRHMPVSEYITP+AFE+YR LG EMGFRY+ASGPMVRSSYKAGEFYIKSMIE 
Sbjct: 315  GQYMRPSKRHMPVSEYITPDAFEKYRTLGMEMGFRYVASGPMVRSSYKAGEFYIKSMIES 374

Query: 291  DRAIPS-VPVS 262
            DR++ S +P+S
Sbjct: 375  DRSVSSQLPIS 385


>ref|XP_002306361.1| predicted protein [Populus trichocarpa]
            gi|308191438|sp|B9H5L9.1|LIAS_POPTR RecName: Full=Lipoyl
            synthase, mitochondrial; AltName: Full=Lipoate synthase;
            Short=LS; Short=Lip-syn; AltName: Full=Lipoic acid
            synthase; Flags: Precursor gi|222855810|gb|EEE93357.1|
            predicted protein [Populus trichocarpa]
          Length = 385

 Score =  580 bits (1496), Expect = e-163
 Identities = 291/371 (78%), Positives = 323/371 (87%), Gaps = 4/371 (1%)
 Frame = -1

Query: 1362 TLKSSNRTFCSST---STQIPKPEYPTTRISDLRQRLSTESPTLSDFIKLRDNESYSVEV 1192
            T K+ NRTF SST   ST+ P P++  T ++ LR RL+ ESPTLSDFI L+ N +YSVEV
Sbjct: 17   TTKAKNRTFSSSTVESSTKQP-PQFSQT-LAGLRARLAVESPTLSDFIHLQSNNTYSVEV 74

Query: 1191 GTXXXXXXXXXXXKESIPGGEKYAKIKKKLRELNLHTVCEEAKCPNLGECWSGGETGTAT 1012
            GT           +E+IPGGEKY +IKKKLREL LHTVCEEAKCPNLGECWSGGETGTAT
Sbjct: 75   GTKKKPLPKPKWMREAIPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTAT 134

Query: 1011 ATIMILGDTCTRGCRFCNVKTSRNPLPPDPNEPSNVAEAIASWGLDYIVITSVDRDDLPD 832
            ATIMILGDTCTRGCRFCNVKTSR P PPDPNEP+NVAEAIASWGLDY+VITSVDRDDL D
Sbjct: 135  ATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVITSVDRDDLAD 194

Query: 831  QGSGHFVETVQKLKILKPDILIEALVPDFRGDRSCVEKVSQSGLDVLAHNIETVEELQSV 652
            QGSGHF ETV KLK LKP++LIEALVPDFRGDR CVEKV++SGLDV AHNIETVEELQS 
Sbjct: 195  QGSGHFAETVHKLKTLKPNMLIEALVPDFRGDRGCVEKVAKSGLDVFAHNIETVEELQSS 254

Query: 651  VRDHRANFKQSMEVLKMAKDFAPVGTLTKTSIMLGCGETPDQVVRTMEKVRDAGVDVMTF 472
            VRDHRANFKQS++VL MAK++AP GTLTKTSIMLGCGE P+QVV+TMEKVR AGVDVMTF
Sbjct: 255  VRDHRANFKQSLDVLMMAKEYAPPGTLTKTSIMLGCGEAPEQVVKTMEKVRAAGVDVMTF 314

Query: 471  GQYMRPSKRHMPVSEYITPEAFEQYRILGTEMGFRYIASGPMVRSSYKAGEFYIKSMIEK 292
            GQYMRPSKRHMPVSEYITP+AFE+Y+ LG EMGFRY+ASGPMVRSSYKAGEFYIKSMIE 
Sbjct: 315  GQYMRPSKRHMPVSEYITPDAFEKYKTLGMEMGFRYVASGPMVRSSYKAGEFYIKSMIES 374

Query: 291  DRAIPS-VPVS 262
            DR++ S +P+S
Sbjct: 375  DRSVSSQLPIS 385


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