BLASTX nr result

ID: Coptis21_contig00009102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009102
         (1448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306904.1| predicted protein [Populus trichocarpa] gi|2...   282   2e-73
gb|ADL36667.1| COL domain class transcription factor [Malus x do...   278   3e-72
ref|XP_002302002.1| predicted protein [Populus trichocarpa] gi|2...   276   1e-71
ref|XP_003589351.1| Zinc finger protein CONSTANS-like protein [M...   251   4e-64
ref|NP_177686.1| putative salt tolerance-like protein [Arabidops...   250   7e-64

>ref|XP_002306904.1| predicted protein [Populus trichocarpa] gi|222856353|gb|EEE93900.1|
            predicted protein [Populus trichocarpa]
          Length = 283

 Score =  282 bits (721), Expect = 2e-73
 Identities = 155/313 (49%), Positives = 198/313 (63%), Gaps = 18/313 (5%)
 Frame = +2

Query: 287  MKIQCDVCNKEEALVFCSADEAALCNGCDQKIHHANKLASKHHRFSLLNPTNKDAPCCDV 466
            MKIQCDVC+KEEA VFC+ADEAALC+ CD ++HHANKLASKH RFSLL+P++K+ P CD+
Sbjct: 1    MKIQCDVCSKEEASVFCTADEAALCDTCDHRVHHANKLASKHQRFSLLHPSSKNFPICDI 60

Query: 467  CQERRAFLFCRDDRAILCRECDVSIHAANEHTKKHIRFLLTGVKL---------ASCNIT 619
            CQ++RAFLFC+ DRAILCR+CD  IH ANEHT+KH RFLLTGVKL         +S ++T
Sbjct: 61   CQDKRAFLFCQQDRAILCRDCDGPIHTANEHTQKHNRFLLTGVKLSATSAVYMSSSSSVT 120

Query: 620  ASSNPSSVDSSIKTNSQMLTKKDTVVAVLXXXXXXXXXXXXXXKGCGGGYIAQXXXXXXX 799
             +SNP +V S++  N+ +    D +V                 +G G             
Sbjct: 121  MNSNPPAVPSTLSANTVINKDGDNLVT---------------SEGFGS-----------T 154

Query: 800  XXXXIAEYLIETLPGWHVEDFLDSSSAPPHGFCKNDD-LLPFLHA-DFETNLANLPSDDV 973
                I+EYL+ETLPGWHVE+FLDSSS  P GF K DD LLP++   D E N+++  S+ +
Sbjct: 155  TSSTISEYLMETLPGWHVEEFLDSSSTTPFGFSKIDDGLLPYMDTHDLERNMSSFSSESL 214

Query: 974  GMWVPQAPP----ATHQFHSITEQKTEFFKEVKDVNKPSLVTKTNKRWSDHGFTVPQISP 1141
            G+WVPQAP      + Q++         FKE K+    S   K N+R +D  FTVPQISP
Sbjct: 215  GLWVPQAPTPPLCTSQQYYYPQLVGQSGFKETKE----STNMKANRRLTDDAFTVPQISP 270

Query: 1142 PSN---KRCRSFW 1171
            PSN   KR R  W
Sbjct: 271  PSNIGSKRSRPLW 283


>gb|ADL36667.1| COL domain class transcription factor [Malus x domestica]
          Length = 300

 Score =  278 bits (711), Expect = 3e-72
 Identities = 153/302 (50%), Positives = 190/302 (62%), Gaps = 10/302 (3%)
 Frame = +2

Query: 287  MKIQCDVCNKEEALVFCSADEAALCNGCDQKIHHANKLASKHHRFSLLNPTNKDAPCCDV 466
            MKIQCDVCNK++A VFC+ADEAALC+ CD ++HHANKLASKHHRFSL++P++K+ P CD+
Sbjct: 1    MKIQCDVCNKDDASVFCTADEAALCDACDHRVHHANKLASKHHRFSLIHPSSKEFPVCDI 60

Query: 467  CQERRAFLFCRDDRAILCRECDVSIHAANEHTKKHIRFLLTGVKLASCNITASSNP---- 634
            CQERRAFLFC+ DRAILCRECD+SIH ANEHT KH RFLLTG+KL++ +    S P    
Sbjct: 61   CQERRAFLFCQQDRAILCRECDLSIHNANEHTLKHNRFLLTGIKLSATSALYESPPPPTV 120

Query: 635  --SSVDSSIKTNSQMLTKKDTVVAVLXXXXXXXXXXXXXXKGCGGGYIAQXXXXXXXXXX 808
              +S +++     Q LTK+    A                       + +          
Sbjct: 121  ATASSETADLKKQQPLTKESVSTASPPISNPNPPPVAAKNSTSSTAAVNKGSGNLVGATS 180

Query: 809  XIAEYLIETLPGWHVEDFLDSSSAPPHGFCK--NDDLLPFLHADFETNLANLPSDDVGMW 982
             I+EYLIETLPGWHVEDFLD SSA P GF K  ND +LPF  A   +NL +  S+++GMW
Sbjct: 181  SISEYLIETLPGWHVEDFLDFSSA-PFGFSKADNDMMLPFSDAYPGSNLNSFSSENMGMW 239

Query: 983  VPQAPPATHQFHSITEQKTEFFKEVKDVNKPSLVTKTNKRWSDHGFTVPQISPPS--NKR 1156
            VPQAP A    +S        FKE K+      +    + W D GFTVPQISPPS  +KR
Sbjct: 240  VPQAPQAPPHQYSQVGGGFVGFKETKEGTN---MNAGKRLWMDDGFTVPQISPPSLGSKR 296

Query: 1157 CR 1162
             R
Sbjct: 297  FR 298


>ref|XP_002302002.1| predicted protein [Populus trichocarpa] gi|222843728|gb|EEE81275.1|
            predicted protein [Populus trichocarpa]
          Length = 310

 Score =  276 bits (705), Expect = 1e-71
 Identities = 157/315 (49%), Positives = 196/315 (62%), Gaps = 20/315 (6%)
 Frame = +2

Query: 287  MKIQCDVCNKEEALVFCSADEAALCNGCDQKIHHANKLASKHHRFSLLNPTNKDAPCCDV 466
            MKIQCDVCNKEEA VFC+ADEAALC+ CD ++HHANKLASKH RFSLL+P++K+ P CD+
Sbjct: 1    MKIQCDVCNKEEASVFCTADEAALCDTCDHRVHHANKLASKHQRFSLLHPSSKNFPICDI 60

Query: 467  CQERRAFLFCRDDRAILCRECDVSIHAANEHTKKHIRFLLTGVKLASCNITASSNPSSVD 646
            CQE+RAFLFC+ DRAILCRECD  IH ANEHT+KH RFLLTGVKL++ +    S+ S  +
Sbjct: 61   CQEKRAFLFCQQDRAILCRECDGPIHTANEHTQKHNRFLLTGVKLSATSAVYISSSSVTN 120

Query: 647  SS----------IKTNSQMLTKKDTVVAVLXXXXXXXXXXXXXXKGC--GGGYIAQXXXX 790
            S            +   Q   KK    A +                   GG  +      
Sbjct: 121  SGGDLVPDSKSQQQQQQQQSIKKPVFDAPVNSNPPTVPSTLSTNTEVNKGGDNLVTNEGF 180

Query: 791  XXXXXXXIAEYLIETLPGWHVEDFLDSSSAPPHGFCKNDD-LLPFLHA-DFETNLANLPS 964
                   I+EYL+ETLPGWHVEDFLDSS+  P GFCK DD LLPF+ A D E+N+++  S
Sbjct: 181  GSTTSSTISEYLMETLPGWHVEDFLDSSTT-PFGFCKIDDGLLPFMDAHDLESNMSSFSS 239

Query: 965  DDVGMWVPQAP--PATHQFHSITEQKTEF-FKEVKDVNKPSLVTKTNKRWSDHGFTVPQI 1135
            + +G+WVPQAP  P T Q +   +   +  FKE+K+        K N+R +D  FTVPQI
Sbjct: 240  ESLGLWVPQAPSTPYTSQQYYYPQLVGQSGFKEIKETTN----MKANRRLADDVFTVPQI 295

Query: 1136 SPPSN---KRCRSFW 1171
            S P+N   KR R  W
Sbjct: 296  SLPANISSKRSRPLW 310


>ref|XP_003589351.1| Zinc finger protein CONSTANS-like protein [Medicago truncatula]
            gi|357438157|ref|XP_003589354.1| Zinc finger protein
            CONSTANS-like protein [Medicago truncatula]
            gi|217072400|gb|ACJ84560.1| unknown [Medicago truncatula]
            gi|355478399|gb|AES59602.1| Zinc finger protein
            CONSTANS-like protein [Medicago truncatula]
            gi|355478402|gb|AES59605.1| Zinc finger protein
            CONSTANS-like protein [Medicago truncatula]
            gi|388509628|gb|AFK42880.1| unknown [Medicago truncatula]
          Length = 273

 Score =  251 bits (640), Expect = 4e-64
 Identities = 146/301 (48%), Positives = 183/301 (60%), Gaps = 6/301 (1%)
 Frame = +2

Query: 287  MKIQCDVCNKEEALVFCSADEAALCNGCDQKIHHANKLASKHHRFSLLNPTNKDAPCCDV 466
            MKIQCDVCNK EA +FC+ADEAALC  CD ++HHANKLASKHHR +L NPT K  P CD+
Sbjct: 1    MKIQCDVCNKNEASLFCTADEAALCIDCDHRVHHANKLASKHHRLALHNPTPKQHPLCDI 60

Query: 467  CQERRAFLFCRDDRAILCRECDVSIHAANEHTKKHIRFLLTGVKLASCNITASSNPSSVD 646
            CQERRAF+ C+ DRAILC++CD SIH+ NE T+KH RFLLTG+K+++ N       SS  
Sbjct: 61   CQERRAFVLCKQDRAILCKDCDSSIHSVNELTQKHDRFLLTGIKISTTN-------SSSS 113

Query: 647  SSIKTNSQMLTKKDTVVAVLXXXXXXXXXXXXXXKGCGGGYIAQXXXXXXXXXXXIAEYL 826
            SS  T S   TK + + +                +G GG  I+Q              YL
Sbjct: 114  SSSSTPSSATTKSNHIPSSSLIEKSTTPSPTSMEEGSGGSTISQ--------------YL 159

Query: 827  IETLPGWHVEDFLDSSSAPPHGFCKNDDLLPFLHADFETNLAN-LPSDDVGMWVPQA-PP 1000
            IETLPGW V+DFLDSSS  P  F K D+L    +A  E NL +  P++++G+WVPQA PP
Sbjct: 160  IETLPGWQVDDFLDSSSV-PFAFSKGDEL---FNAGIEENLDSFFPNNNMGIWVPQAPPP 215

Query: 1001 ATHQFHSITEQKTEFFKEVKDVNKPSLVTKTNKRWSDHG---FTVPQISPPSN-KRCRSF 1168
            + +    I   ++E  K  K  N  S + K+  R  DH    FTVPQISP +N KR R  
Sbjct: 216  SLYSSSQIMMGQSETTK--KGSNNKSTINKSRLR-DDHDSNIFTVPQISPVANSKRTRYL 272

Query: 1169 W 1171
            W
Sbjct: 273  W 273


>ref|NP_177686.1| putative salt tolerance-like protein [Arabidopsis thaliana]
            gi|17433066|sp|Q9LQZ7.1|STHX_ARATH RecName: Full=Probable
            salt tolerance-like protein At1g75540
            gi|9369377|gb|AAF87126.1|AC006434_22 F10A5.24
            [Arabidopsis thaliana] gi|225898084|dbj|BAH30374.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332197610|gb|AEE35731.1| putative salt tolerance-like
            protein [Arabidopsis thaliana]
          Length = 331

 Score =  250 bits (638), Expect = 7e-64
 Identities = 145/337 (43%), Positives = 194/337 (57%), Gaps = 42/337 (12%)
 Frame = +2

Query: 287  MKIQCDVCNKEEALVFCSADEAALCNGCDQKIHHANKLASKHHRFSLLNPT--NKDAPCC 460
            MKI+CDVC+KEEA VFC+ADEA+LC GCD ++HHANKLASKH RFSLL P+  N  +P C
Sbjct: 1    MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 461  DVCQERRAFLFCRDDRAILCRECDVSIHAANEHTKKHIRFLLTGVKLASCN-----ITAS 625
            D+CQ+++A LFC+ DRAILC++CD SIHAANEHTKKH RFLLTGVKL++ +      + S
Sbjct: 61   DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 626  SNPSSVDSSIKTNSQMLTKKDTVVAVLXXXXXXXXXXXXXXKGCGGGYIAQXXXXXXXXX 805
            S+ SS +         ++    +   L                 G   + Q         
Sbjct: 121  SSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGSTST--- 177

Query: 806  XXIAEYLIETLPGWHVEDFLDSSSAPPHGFCK---NDDLLPFLHADFE------------ 940
              I+EYL++TLPGWHVEDFLD SS P +GF K   +D +LP++  + +            
Sbjct: 178  --ISEYLMDTLPGWHVEDFLD-SSLPTYGFSKSGDDDGVLPYMEPEDDNNTKRNNNNNNN 234

Query: 941  --TNLANLPSDDVGMWVPQAP---PATHQFHSITEQKTEFFKEVKDVNKPSLVT------ 1087
               N  +LPS ++G+WVPQ P   P+++     ++     F        P +V+      
Sbjct: 235  NNNNTVSLPSKNLGIWVPQIPQTLPSSYPNQYFSQDNNIQFGMYNKETSPEVVSFAPIQN 294

Query: 1088 -----KTNKRW-SDHGFTVPQISPP---SNKRCRSFW 1171
                 + NKRW  D GFTVPQI+PP   SNK+ RSFW
Sbjct: 295  MKQQGQNNKRWYDDGGFTVPQITPPPLSSNKKFRSFW 331


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