BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009082
         (1292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               109   5e-30
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...   102   3e-29
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...   102   1e-28
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thali...   121   3e-25

>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  109 bits (273), Expect(3) = 5e-30
 Identities = 46/122 (37%), Positives = 78/122 (63%)
 Frame = -3

Query: 891 YAPLTTK*HSNRV*SWKGRLFTYGGRLQLVKSVLN*LSMYWFAVFMIPKSTVKEINRICR 712
           Y+PL  +    R+ +W  R F++ GR  L+KSVL  +  +W A F +P+  ++EI+++C 
Sbjct: 433 YSPLLEQ-IKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCS 491

Query: 711 NFLWGGPDCDQSHALISWDVVCSSYNEGGLGLRELDKVNEVAIVRQIWKLLTKKDTLRAE 532
           +FLW G +     A ISWD+VC    EGGLGLR L + N+V+ ++ +W++++  ++L  +
Sbjct: 492 SFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTK 551

Query: 531 WV 526
           WV
Sbjct: 552 WV 553



 Score = 35.0 bits (79), Expect(3) = 5e-30
 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
 Frame = -3

Query: 219 RRHLPDIIMHMEEI-----VDIVGGEDKMVWIVS---LRGDYSLKDTYENIKSSRQRINW 64
           RRH   ++  +EE+     +     ED ++W       +  +S +DT+  IK++   ++W
Sbjct: 644 RRHRTSLLNEIEEMMAYQRIHHSDAEDTVLWRGKNDVFKPHFSTRDTWHLIKATSSTVSW 703

Query: 63  HQLVWF 46
           H+ VWF
Sbjct: 704 HKGVWF 709



 Score = 34.3 bits (77), Expect(3) = 5e-30
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -2

Query: 451 SWKWRNLLNTRKETSDIVIYQFGNGERTSF*LDRWHPAGIL 329
           SW WR +L  R         + GNGE  SF  D W   G L
Sbjct: 574 SWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSAHGRL 614


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score =  102 bits (254), Expect(3) = 3e-29
 Identities = 47/122 (38%), Positives = 76/122 (62%)
 Frame = -3

Query: 891 YAPLTTK*HSNRV*SWKGRLFTYGGRLQLVKSVLN*LSMYWFAVFMIPKSTVKEINRICR 712
           Y PL  +    R+  W  R  ++ GRLQL+ SV++ L+ +W + F +P + +KEI+ +C 
Sbjct: 6   YIPLIERIRE-RISCWTARHLSFAGRLQLISSVIHSLTNFWMSAFRLPNACIKEIDGLCS 64

Query: 711 NFLWGGPDCDQSHALISWDVVCSSYNEGGLGLRELDKVNEVAIVRQIWKLLTKKDTLRAE 532
            FLW GP+ ++  A +SW+ VC    EGGLGLR L + N+V  ++ IW+LL+   +L  +
Sbjct: 65  AFLWSGPELNRKKAKVSWNDVCMPKEEGGLGLRSLTEANKVCCLKLIWRLLS-SSSLWVQ 123

Query: 531 WV 526
           W+
Sbjct: 124 WL 125



 Score = 38.1 bits (87), Expect(3) = 3e-29
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = -2

Query: 451 SWKWRNLLNTRKETSDIVIYQFGNGERTSF*LDRWHPAGIL 329
           SW WR LL  R   S    Y+  NG+  SF  D W P G L
Sbjct: 146 SWMWRKLLKYRHLASGFTQYEIRNGKGVSFWHDNWSPLGPL 186



 Score = 36.2 bits (82), Expect(3) = 3e-29
 Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
 Frame = -3

Query: 243 AWSIPHHVRRHLPDIIMHMEEIVD------IVGGEDKMVWIVS---LRGDYSLKDTYENI 91
           A ++ H  RRH  D +  ME  ++      +V  ED ++W       +  +S K+T+ + 
Sbjct: 207 AEALTHRRRRHRADHLNQMEAQLEELRTKGLVETEDVVLWKGKGGRFKPSFSTKETWADT 266

Query: 90  KSSRQRINWHQLVWFTN 40
           +  + R  W+Q +WF++
Sbjct: 267 REQKPRNEWYQGIWFSH 283


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score =  102 bits (253), Expect(4) = 1e-28
 Identities = 41/111 (36%), Positives = 69/111 (62%)
 Frame = -3

Query: 858 RV*SWKGRLFTYGGRLQLVKSVLN*LSMYWFAVFMIPKSTVKEINRICRNFLWGGPDCDQ 679
           ++ SW  R  +Y GRL L+ SVL  +  +W   F +P+  ++EI+++C  +LW G + + 
Sbjct: 45  KICSWSARFLSYAGRLNLISSVLWSICNFWMGAFRLPRDCIREIDKMCSAYLWSGGELNT 104

Query: 678 SHALISWDVVCSSYNEGGLGLRELDKVNEVAIVRQIWKLLTKKDTLRAEWV 526
           S A I+W  VC    EGGLGLR L + N+V  ++ IW++++  D+L  +W+
Sbjct: 105 SKAKITWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWI 155



 Score = 34.3 bits (77), Expect(4) = 1e-28
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -2

Query: 451 SWKWRNLLNTRKETSDIVIYQFGNGERTSF*LDRWHPAGIL 329
           SW WR +L  R     +   +  NG RTSF  D W   G L
Sbjct: 176 SWMWRKILKFRDIARTLCKVEINNGARTSFWYDDWSDLGRL 216



 Score = 32.7 bits (73), Expect(4) = 1e-28
 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
 Frame = -3

Query: 219 RRHLPDIIMHMEEIVDIVGG-----EDKMVWIVS---LRGDYSLKDTYENIKSSRQRINW 64
           RRH  + +  +EE + +        ED+ +W       R  +S KDT+ +I++   ++ W
Sbjct: 246 RRHRTNFLNRVEERLILSWNSRNQAEDRALWKGKENRFRSIFSTKDTWNHIRTVSNKVAW 305

Query: 63  HQLVWF 46
           ++ VWF
Sbjct: 306 YKGVWF 311



 Score = 25.0 bits (53), Expect(4) = 1e-28
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 43  QQIPRHAFITWLAL 2
           Q IP+HAF  WLA+
Sbjct: 313 QAIPKHAFCMWLAV 326


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  119 bits (298), Expect(2) = 3e-25
 Identities = 75/283 (26%), Positives = 138/283 (48%), Gaps = 8/283 (2%)
 Frame = -3

Query: 864 SNRV*SWKGRLFTYGGRLQLVKSVLN*LSMYWFAVFMIPKSTVKEINRICRNFLWGGPDC 685
           +++V  W  R  +Y GR+QL+ SVL  + +YW ++F++P   +K + +I ++FLW G D 
Sbjct: 81  TSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDM 140

Query: 684 DQSHALISWDVVCSSYNEGGLGLRELDKVNEVAIVRQIWKLLTKKD-TLRAEWVHXXXXX 508
             + A ++WD VC    EGGLG++ + + N++A+++ IW L    D ++ + W+      
Sbjct: 141 RTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLR 200

Query: 507 XXXXXXKATFDN*KYQMTVPGSGGTY*TQGK--KLQTLSYINLA-MVREQVSSSI--DGT 343
                   T  N  +              GK  KL++L++  +  ++ + +++S+  D  
Sbjct: 201 GRNFWTIKTPQNCSW------------AWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNW 248

Query: 342 LQVY*SVTFLKHVLIHDSTCRMTCTVSSMIENGAWSIP--HHVRRHLPDIIMHMEEIVDI 169
                         I+DS       V+ +I+N  W  P    +  H P I          
Sbjct: 249 HPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWH-PIIEAIPSNSNPK 307

Query: 168 VGGEDKMVWIVSLRGDYSLKDTYENIKSSRQRINWHQLVWFTN 40
           +G +D++VW+ S    +S+K  +E ++  RQ + WH +VWF N
Sbjct: 308 MGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKN 350



 Score = 23.5 bits (49), Expect(2) = 3e-25
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -2

Query: 37  IPRHAFITWLAL 2
           +PRH+F+ W+A+
Sbjct: 352 VPRHSFLLWMAV 363


>gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thaliana]
          Length = 348

 Score =  121 bits (304), Expect = 3e-25
 Identities = 88/304 (28%), Positives = 149/304 (49%), Gaps = 10/304 (3%)
 Frame = -3

Query: 891 YAPLTTK*HSNRV*SWKGRLFTYGGRLQLVKSVLN*LSMYWFAVFMIPKSTVKEINRICR 712
           Y PL  K    R+ SW GR  +Y GRLQL+KSVL  ++ +W + F +P + +KEI R+C 
Sbjct: 10  YLPLIEKIRK-RISSWTGRFLSYCGRLQLIKSVLMSITNFWSSAFRLPGNCMKEIERLCS 68

Query: 711 NFLWGGPDCDQSHALISWDVVCSSYNEGGLGLRELDKVNEVAIVRQIWKLLTKKDTLRAE 532
            FLW GPD    +A I+W  VC    EGGLGLR L ++N V  ++ IW+LL  + +L  +
Sbjct: 69  AFLWSGPDLKTHNAKIAWSKVCLPMCEGGLGLRPLKEINTVCGLKLIWRLLASQTSLWGQ 128

Query: 531 WVHXXXXXXXXXXXKATFDN*KYQMTVPGSGGTY*TQGKKLQTLSYINLAMVREQVSSSI 352
           WV                 N  + +      G++    +KL TL  +  +  ++++ +  
Sbjct: 129 WVQTYLIRR----------NNFWAIKASSYQGSW--MWRKLLTLRDVARSFHKKEIHNGR 176

Query: 351 DGTL--QVY*SVTFLKHVLIHDSTCRMTCTVSSMIENGAWSIPHHVRRHLPDIIMHMEEI 178
           + +     + S+  L  VL       +  T ++ +EN   +     R+H  D+++ +E  
Sbjct: 177 NTSFWYDHWSSMGTLVDVLGARGCIDLGITTTTNMENVFTT--RRSRKHRGDLLVRIEAE 234

Query: 177 VDIVGG------EDKMVWIVS--LRGDYSLKDTYENIKSSRQRINWHQLVWFTNRSLDML 22
           ++          ED  +W  S   +  +S ++T++ I+ +     W + VWF     ++L
Sbjct: 235 IEAAKTRHQPDIEDIDLWKPSTGYKKTFSTRETWKLIRMAEPVCEWAKGVWFPKPHQNLL 294

Query: 21  SLLG 10
           SLLG
Sbjct: 295 SLLG 298