BLASTX nr result

ID: Coptis21_contig00009066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009066
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC86707.1| non-race specific disease resistance protein 1-li...    80   1e-12
gb|ABC86706.1| non-race specific disease resistance protein 1-li...    79   3e-12
ref|XP_002282205.1| PREDICTED: protein NDR1 [Vitis vinifera]           71   7e-10
ref|XP_004158486.1| PREDICTED: protein NDR1-like [Cucumis sativus]     62   3e-07
gb|AAR21296.1| NDR1-like protein [Nicotiana benthamiana]               61   5e-07

>gb|ABC86707.1| non-race specific disease resistance protein 1-like protein b
           [Coffea arabica]
          Length = 214

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 61/166 (36%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
 Frame = -3

Query: 797 SFLLCLGLAV--------SAVPILSIEEFYVPAL---DKCSDDISNTTIFFNLKLDNHHL 651
           SF+L  GL           + P  SIE+FYVP+L   D  +   SN T++F+L+L N   
Sbjct: 17  SFILTSGLTALFMWLSLRGSKPSCSIEDFYVPSLNATDNSTTTRSNHTLYFDLRLKNEMK 76

Query: 650 I--TYYEVLNVTIYFGQNLGVPVGFVSIPEFEQGQFKKIIHVEERVTTVGVPWETATREV 477
                Y+ LN+T ++ QN  + +   ++P F QG  KK    +E V T GVPWE A R V
Sbjct: 77  DKGVGYDDLNLTFFYVQNGSLGIANYTVPSFYQGHDKKARR-KELVQTYGVPWEAAYRAV 135

Query: 476 SNCRGTAVFQAHLETVVQIK---WSFIQRLIMVKANVTINDHGDMV 348
           SN   T  F+  L T V+ K   W   +  + V ANV +N+ G  V
Sbjct: 136 SN-GSTVTFRVGLTTRVRYKILFWYTKRHGLKVGANVDVNNSGKKV 180


>gb|ABC86706.1| non-race specific disease resistance protein 1-like protein a
           [Coffea arabica]
          Length = 214

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 60/166 (36%), Positives = 84/166 (50%), Gaps = 16/166 (9%)
 Frame = -3

Query: 797 SFLLCLGLAV--------SAVPILSIEEFYVPAL---DKCSDDISNTTIFFNLKLDNHHL 651
           SF+L  GL           + P  SIE+FYVP+L   D  +   SN T++F+L+  N   
Sbjct: 17  SFILTSGLTALFMWLSLRGSKPSCSIEDFYVPSLNATDNSTTTRSNHTLYFDLRFKNEMK 76

Query: 650 I--TYYEVLNVTIYFGQNLGVPVGFVSIPEFEQGQFKKIIHVEERVTTVGVPWETATREV 477
                Y+ LN+T ++ QN  + +   ++P F QG  KK    +E V T GVPWE A R V
Sbjct: 77  DKGVGYDDLNLTFFYVQNGSLGIANYTVPSFYQGHDKKARR-KELVQTYGVPWEAAYRAV 135

Query: 476 SNCRGTAVFQAHLETVVQIK---WSFIQRLIMVKANVTINDHGDMV 348
           SN   T  F+  L T V+ K   W   +  + V ANV +N+ G  V
Sbjct: 136 SN-GSTVTFRVGLTTRVRYKILFWYTKRHGLKVGANVDVNNSGKKV 180


>ref|XP_002282205.1| PREDICTED: protein NDR1 [Vitis vinifera]
          Length = 205

 Score = 70.9 bits (172), Expect = 7e-10
 Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
 Frame = -3

Query: 797 SFLLCLGLAV--------SAVPILSIEEFYVPALDKCSDDISNTTIFFNLKLDNHHLIT- 645
           SF+  LGL          ++ P  SI+ FY P+L++  +  +N++++F+LKLDN +    
Sbjct: 14  SFIFTLGLTALFMWLSLRTSNPTCSIQYFYAPSLNRTLNT-TNSSLYFDLKLDNGNKDKG 72

Query: 644 -YYEVLNVTIYFGQNLGVPVGFVSIPEFEQGQFKKIIHVEERVTTVGVPWETATREVSNC 468
            YY+ +N+T Y+G      VG +++P F QG  KK       V T  VPW  A       
Sbjct: 73  IYYDPINLTFYYGFTPNFSVGNLTVPAFYQGH-KKNARRRMLVQTPSVPWPEA-----RT 126

Query: 467 RGTAVFQAHLETVVQIK---WSFIQRLIMVKANVTIN--------DHGDMVKSFASVQVR 321
            GT  F+  L+T V+ K   W+  +  I V A V +N          G  +KS A  + R
Sbjct: 127 NGTVWFRMDLQTKVRFKILFWNTKREKISVSAPVEVNATDGKKIHKKGIKLKSGAPERWR 186

Query: 320 NSA 312
           N A
Sbjct: 187 NRA 189


>ref|XP_004158486.1| PREDICTED: protein NDR1-like [Cucumis sativus]
          Length = 213

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
 Frame = -3

Query: 758 PILSIEEFYVPALDKCSDDISNTTIFFNLKLDNHH--LITYYEVLNVTIYFGQNLGVPVG 585
           P  SIE FY+PAL++  +  SN+++ F+L+L N +     YY+ + + +         VG
Sbjct: 34  PKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVG 93

Query: 584 FVSIPEFEQGQFKKIIHVEERVTTVGVPWETATREVSNCRGTAVFQAHLETVVQIK---W 414
            +++P F QG+ KK +  +E     GV W+  +R      G+ V +  L T V+ K   W
Sbjct: 94  NLTVPGFHQGRDKKALR-KESFEARGVDWKAVSR-----NGSTVIRLDLATAVRYKILLW 147

Query: 413 SFIQRLIMVKANVTIND-------HGDMVKSFASVQVRNSAN 309
              +  + +   V +N+       HG  + S A+V V + +N
Sbjct: 148 KTKRENLRLGTEVKVNEQGVKDNPHGITLNSGAAVPVGSLSN 189


>gb|AAR21296.1| NDR1-like protein [Nicotiana benthamiana]
          Length = 205

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
 Frame = -3

Query: 806 RLVSFLLCLGLAVSAV--------PILSIEEFYVPAL---DKCSDDISNTTIFFNLKLDN 660
           + + F+L  GL    +        P  S++ FY+PAL   D  +   SN T+ F L L+N
Sbjct: 13  KCIQFILTAGLTALFIWLSLRTTKPSCSLDNFYLPALNNSDNSNSTRSNHTLSFQLNLNN 72

Query: 659 HHLI--TYYEVLNVTIYFGQNLGVPVGFVSIPEFEQGQFKKIIHVEERVTTVGVPWETAT 486
                   Y+ + ++ Y+G N   P+G  ++P F QG  KK  H +  + T  +PW  A 
Sbjct: 73  KMKDKGVRYDDIKLSFYYGTNTSFPIGNYTVPGFYQGHDKK-AHKKGILETQKMPWNDAL 131

Query: 485 REVSNCRGTAVFQAHLETVVQIK 417
           + VSN     VF+  + T V+ K
Sbjct: 132 KMVSN-GSKVVFRVDVATRVRYK 153


Top