BLASTX nr result

ID: Coptis21_contig00009062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009062
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512644.1| conserved hypothetical protein [Ricinus comm...    83   3e-14
ref|XP_002304653.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_004165553.1| PREDICTED: protein TIFY 9-like [Cucumis sati...    80   1e-13
ref|XP_002297866.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_004140649.1| PREDICTED: protein TIFY 9-like [Cucumis sati...    75   4e-12

>ref|XP_002512644.1| conserved hypothetical protein [Ricinus communis]
           gi|223548605|gb|EEF50096.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 177

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 57/135 (42%), Positives = 69/135 (51%), Gaps = 36/135 (26%)
 Frame = -1

Query: 298 DIQSSISKISPEILKTMXXXXXXXXXXXXXXXXXI------------------------- 194
           DIQS+ISKI+PE+L+++                                           
Sbjct: 34  DIQSAISKINPELLRSVIVSGSANQKNAENGNQFDSKMFPALPVFSPLPRPTLETPPQTA 93

Query: 193 ----FYNGTVSVFNMPHDKAENILKLAEDGNLKFTE-----HKL--LDKDLPFARKKSLQ 47
               FYNG V+VF++P DKAE ILKLAE+G  K  E     H L  LD DLP AR+KSLQ
Sbjct: 94  PLTIFYNGAVAVFDVPRDKAETILKLAENGVSKSAESTSQKHLLDNLDGDLPIARRKSLQ 153

Query: 46  RFLEKRKERMASLSP 2
           RFLEKRKER+ S SP
Sbjct: 154 RFLEKRKERLTSASP 168


>ref|XP_002304653.1| predicted protein [Populus trichocarpa] gi|222842085|gb|EEE79632.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/78 (58%), Positives = 54/78 (69%), Gaps = 14/78 (17%)
 Frame = -1

Query: 193 FYNGTVSVFNMPHDKAENILKLAEDGNLKF---------TEH-----KLLDKDLPFARKK 56
           FYNGTV+VF++P DKAENILKLAE G  K          T+H     + LD DLP AR+K
Sbjct: 113 FYNGTVAVFDVPRDKAENILKLAEKGFSKTVVESVADPRTDHQQKLLESLDGDLPIARRK 172

Query: 55  SLQRFLEKRKERMASLSP 2
           SLQRFLEKRKER+ S +P
Sbjct: 173 SLQRFLEKRKERLTSATP 190


>ref|XP_004165553.1| PREDICTED: protein TIFY 9-like [Cucumis sativus]
          Length = 184

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 13/77 (16%)
 Frame = -1

Query: 193 FYNGTVSVFNMPHDKAENILKLAEDGN--------LKFTEHKL-----LDKDLPFARKKS 53
           FYNGTV+VF++P DKAENILKL  +G         +  T+H+      LD DLP ARKKS
Sbjct: 99  FYNGTVAVFDVPRDKAENILKLVAEGKAEGNPTVAIPSTDHQQHLLASLDGDLPIARKKS 158

Query: 52  LQRFLEKRKERMASLSP 2
           LQRFLEKRKER+ + SP
Sbjct: 159 LQRFLEKRKERLTTASP 175


>ref|XP_002297866.1| predicted protein [Populus trichocarpa] gi|222845124|gb|EEE82671.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 14/78 (17%)
 Frame = -1

Query: 193 FYNGTVSVFNMPHDKAENILKLAEDGNLKFTEHKLLD--------------KDLPFARKK 56
           FYNGTV+VFN+P DKAENILKLAE    K +   + D               DLP AR+K
Sbjct: 114 FYNGTVAVFNVPRDKAENILKLAEKRISKTSAEPMTDPKTDQQQLFESLDGADLPIARRK 173

Query: 55  SLQRFLEKRKERMASLSP 2
           SLQRFLEKRK R+ S+SP
Sbjct: 174 SLQRFLEKRKGRLTSVSP 191


>ref|XP_004140649.1| PREDICTED: protein TIFY 9-like [Cucumis sativus]
          Length = 169

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 13/71 (18%)
 Frame = -1

Query: 193 FYNGTVSVFNMPHDKAENILKLAEDGN--------LKFTEHK-----LLDKDLPFARKKS 53
           FYNGTV+VF++P DKAENILKL  +G         +  T+H+      LD DLP ARKKS
Sbjct: 99  FYNGTVAVFDVPRDKAENILKLVAEGKAEGNPTVAIPSTDHQQHLLASLDGDLPIARKKS 158

Query: 52  LQRFLEKRKER 20
           LQRFLEKRKER
Sbjct: 159 LQRFLEKRKER 169


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