BLASTX nr result

ID: Coptis21_contig00009055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009055
         (1501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002443905.1| hypothetical protein SORBIDRAFT_07g004115 [S...    85   6e-14
ref|XP_004150549.1| PREDICTED: uncharacterized protein LOC101213...    75   3e-11
ref|XP_003522973.1| PREDICTED: uncharacterized protein LOC100778...    75   5e-11
gb|AAD22702.1| putative TNP1-like transposon protein [Arabidopsi...    72   3e-10
ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-09

>ref|XP_002443905.1| hypothetical protein SORBIDRAFT_07g004115 [Sorghum bicolor]
            gi|241940255|gb|EES13400.1| hypothetical protein
            SORBIDRAFT_07g004115 [Sorghum bicolor]
          Length = 565

 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 78/338 (23%), Positives = 152/338 (44%), Gaps = 6/338 (1%)
 Frame = +1

Query: 205  KLLVEVWSNGQIVGPNASKFKTAIGNEVRLHIPINTKDWRLVKDDFKDAIWKALTKEYEF 384
            K+ + +   GQ +G N  +F +AIG  VR  + +   DWRLV  + KD +W+ L + Y+ 
Sbjct: 126  KIKITLNEFGQPIGQNYRQFSSAIGCLVRRTLSVGCSDWRLVDVEKKDQVWETLKEFYDV 185

Query: 385  NVSNFAARPWVEMNYSQKLRTVKATYRSKFLANTESIEAAKANCPPGVNPTLWVDFVDYE 564
            +    AA+ W  +  ++K +  KAT + +F     +IEA +      V PT W   + + 
Sbjct: 186  DE---AAKNWFLITAARKWKDFKATLKKEFFDEKITIEALQRKHGDRVKPTDWKFLIKHW 242

Query: 565  LQPKVKDXXXXXXXXXXMNDIGTTNGRKTFSQIHKELQEQNPQAKRTRVDDWCKGRERRD 744
              P+ +              I  T+G K+F+    E+  +  +  R R + + +   R++
Sbjct: 243  TSPEFEARMEISKANRTKLRIHHTSGSKSFACSRHEMAIELGRVPR-RDEIYIRTHTRKN 301

Query: 745  GSVLASAREKYDQVKAVQKRRLESGETDTEDINSDALTEVLG-KEKKNRVRGVGSNITRK 921
            G     A    +++++V +   E  E   +    D  T   G KE + RVR +G   T +
Sbjct: 302  GVPSQQAEPIINKLRSVVEAHPELIERSIQ--QGDVFTVACGEKEPRGRVRALGLGPTPQ 359

Query: 922  HLQHAAVA--NDLINQMATTSVAKVEADMASFKSKVDGDMSEVKSMLKVLIQQ---QLCN 1086
             +    +        QM   +  KVE+D AS + ++  ++ E     +++ Q+   ++ +
Sbjct: 360  DIGTPGLKCYTPTRLQMEVLARRKVESDKASLERRIQ-ELEEKLDEARIVQQRRNMEIAS 418

Query: 1087 NVTANAEAHMSVTTPRTELGSNSAQRHSPATPHNLSPA 1200
            +  +N+  H++    +     +     SP+  H L+P+
Sbjct: 419  HNGSNSRNHVA----KEAAAPSKQPSSSPSALHTLAPS 452


>ref|XP_004150549.1| PREDICTED: uncharacterized protein LOC101213947 [Cucumis sativus]
            gi|449512903|ref|XP_004164174.1| PREDICTED:
            uncharacterized LOC101213947 [Cucumis sativus]
          Length = 701

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 90/432 (20%), Positives = 171/432 (39%), Gaps = 17/432 (3%)
 Frame = +1

Query: 187  LRGLSGKLLVEVWSNGQIVGPNASKFKTAIGNEVRLHIPINTKDWRLVKDDFKDAIWKAL 366
            +R    +  +E    GQ VG NA K ++ IG  VR  IP+    W+ V  + KD I+  +
Sbjct: 37   IRNSGERKTIEYNDRGQPVGENAKKMQSFIGVCVRQQIPLTYNSWKEVPQELKDTIFDCI 96

Query: 367  TKEYEFNVSNFAARPWVEMNYSQKLRTVKATYRSKFLANTESIEAAKANCPP----GVNP 534
               +   V + +++ ++  + S+K R+ K+T    ++   +  E ++   PP     ++ 
Sbjct: 97   QMSF---VVDLSSKHYILQSASKKFRSFKSTLTQMYILPYKD-EPSRLQYPPEKYSHIDK 152

Query: 535  TLWVDFVDYELQPKVKDXXXXXXXXXXMNDIGTTNGRKTFSQIHKELQEQNPQAKRTRVD 714
              W  FV   L  + +                    RK ++ + +EL+  +    R  + 
Sbjct: 153  KQWESFVKARLSEEWEVFSSAQRERRAKCIYNHHISRKGYANLAQELELSSDPCNRATL- 211

Query: 715  DWCKGRERRDGSVLASAR----EKYDQVKAVQKRRLESGETDTEDINSDALTEVLG-KEK 879
             W + R+R++      A     ++ D++ A++K               D LTE LG  E 
Sbjct: 212  -WKEARKRKNNGCFDDATSECVKRIDELAAIRK-------------GQDILTEALGTPEH 257

Query: 880  KNRVRGVGS--------NITRKHLQHAAVANDLINQMATTSVAKVEADMASFKSKVDGDM 1035
            + R+RGVG         N+ R +L+ +  + D      +    + +   A  +++   + 
Sbjct: 258  RGRIRGVGEFVSPALHVNVARGNLKLSQQSQDEDETQQSQPENETQQSQAENETQQSQEE 317

Query: 1036 SEVKSMLKVLIQQQLCNNVTANAEAHMSVTTPRTELGSNSAQRHSPATPHNLSPAFGSLE 1215
            +E +       Q  +    T   +       P+ ++     +      P +L  A GSL+
Sbjct: 318  NETRQS-----QSSVLRKKTKEKKVQKGKKVPKGKMVVKKPEEILEGIPCHL--AIGSLD 370

Query: 1216 QPRVTLLDKFGAEVAKGSVDVGATICHSRILVGGERRVYIDEVLIPDAAVYDGPQDGNET 1395
               V  + K          DV     H   L     RV +D +++ D A+    +   ET
Sbjct: 371  --NVVAIGKMFES------DVQCPTIHGIPLGADNIRVTVDVIMVEDVALPIPLKGEIET 422

Query: 1396 LNAWVEGGYIAW 1431
            LN  + G ++AW
Sbjct: 423  LNQAI-GNFVAW 433


>ref|XP_003522973.1| PREDICTED: uncharacterized protein LOC100778497 [Glycine max]
          Length = 482

 Score = 75.1 bits (183), Expect = 5e-11
 Identities = 59/263 (22%), Positives = 117/263 (44%), Gaps = 5/263 (1%)
 Frame = +1

Query: 295  HIPINTKDWRLVKDDFKDAIWKALTKEYEFNVSNFAARPWVEMNYSQKLRTVKATYRSKF 474
            ++PIN + W  V   +KD  +  L   + F  S   AR +  +  S+K R  K    +  
Sbjct: 180  NVPINFESWTKVPKSYKDNCFNILKTLFHFQASESTARRYCLLTMSRKYRNGKHKLWTSA 239

Query: 475  LANTESIEAAKANCPPGVNPTLWVDFVDYELQPKVKDXXXXXXXXXXMNDIGTTNGRKTF 654
               + S E   A  P G+    W+ F+D  L+P+ ++             +  T G K  
Sbjct: 240  FDPSLSREQLIAKVPYGIPEDQWLSFIDNHLKPEYQELCRKNAVVRQKQTVPHTGGAKLL 299

Query: 655  SQIHKELQEQNPQAKRTRVDDWCKGRERRDGSVLASAREKYDQVKAVQKRRLESGETDTE 834
            S+   E++ +  +   +RV+ +   R+++DGS +    E+   +     + +      TE
Sbjct: 300  SRKQHEMEVELGR-PISRVELYIATRKKKDGSFV---NEEARSIGEKMTQEISECANPTE 355

Query: 835  DINSDALTEVLGKEKKNRVR-----GVGSNITRKHLQHAAVANDLINQMATTSVAKVEAD 999
               +DAL +VLG++   RVR     G+ S   +   + +    +L N  +  S ++++ +
Sbjct: 356  ISTNDALAKVLGRDHCGRVRCLGLGGLHSVAFQSTEKFSGTGRNLSNSNSVES-SQLKEE 414

Query: 1000 MASFKSKVDGDMSEVKSMLKVLI 1068
            + S K+K+      VK++  +++
Sbjct: 415  VTSLKTKLAASEENVKTLQNIML 437


>gb|AAD22702.1| putative TNP1-like transposon protein [Arabidopsis thaliana]
          Length = 531

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 71/318 (22%), Positives = 129/318 (40%), Gaps = 7/318 (2%)
 Frame = +1

Query: 232  GQIVGPNASKFKTAIGNEVRLHIPINTKDWRLVKDDFKDAIWKALTKEYEFNVSNFAARP 411
            G+ +GP + K  + +G  +R H+PIN  +W+ V  D K  +WK++   +E +        
Sbjct: 20   GEAIGPGSVKLSSYVGTLMREHVPINIVNWKKVTRDLKTVLWKSIQARFELD------ED 73

Query: 412  WVEMNYSQKLRTVKATYRSKFLANTESIEAAKAN------CPPGVNPTLWVDFVDYELQP 573
            W  ++   ++  +   ++S+     ++I  A  N       P  +NP  W  FV      
Sbjct: 74   WQRISVINQMGNLWRAHKSR---RVKAINLAANNQERMNLRPTNINPVEWQKFV------ 124

Query: 574  KVKDXXXXXXXXXXMNDIGTTNGRKTFSQIHKELQEQNPQAKRTRVDDWCKGRERRDGS- 750
            K+K                        S   K+L+  +P +  TR+  W K R ++DG+ 
Sbjct: 125  KLKT-----------------------SSAFKKLESGDPSSV-TRLQVWIKSRTKKDGTP 160

Query: 751  VLASAREKYDQVKAVQKRRLESGETDTEDINSDALTEVLGKEKKNRVRGVGSNITRKHLQ 930
            V  +A EK  +   +      +  T+ ++   D L ++LG +   R+R +G  +++  L 
Sbjct: 161  VDTNAAEKIQEAAEIVGSDAPTFSTNPDE---DHLAKLLGPDNPGRLRVMGRGMSKTKLA 217

Query: 931  HAAVANDLINQMATTSVAKVEADMASFKSKVDGDMSEVKSMLKVLIQQQLCNNVTANAEA 1110
               V N        T +A++E      K +V+    E+     + I+ Q           
Sbjct: 218  CLQVKN--------TCMAEMEERQVKLKKQVNDLEDEI-----IRIKNQ----------- 253

Query: 1111 HMSVTTPRTELGSNSAQR 1164
                  P  E+G NSA R
Sbjct: 254  -----RPEAEMGENSAAR 266


>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
            predicted protein [Populus trichocarpa]
          Length = 327

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 62/286 (21%), Positives = 120/286 (41%), Gaps = 3/286 (1%)
 Frame = +1

Query: 205  KLLVEVWSNGQIVGPNASKFKTAIGNEVR--LHIPINTKDWRLVKDDFKDAIWKALTKEY 378
            ++ V + + GQ VGP ASK  T +G   R     P+   DW  + D+ K+ +W+ +  ++
Sbjct: 9    QIAVPINTLGQPVGPEASKLSTFLGTVARNGEMAPLTFVDWFAMPDEKKENMWQFVQTKF 68

Query: 379  EFNVSNFAARPWVEMNYSQKLRTVKATYRSKFLANTESIEAAKANCPPGVNPTLWVDFVD 558
            +        + WV  + + K R  KA  +S+     ++ E    +    V P  W   + 
Sbjct: 69   DIEP---VCKTWVLRSLASKWRNWKAKLKSEHYYPHKTDEERLNDRDRRVLPEQWAILIS 125

Query: 559  YELQPKVKDXXXXXXXXXXMNDIGTTNGRKTFSQIHKELQEQNPQAKR-TRVDDWCKGRE 735
            Y    + +                 T G K+F++I +E + +    K  TR + + K R 
Sbjct: 126  YWNSEEAQLRSAKNKANRSNQKSTHTAGSKSFARIREEERTKKSGGKEPTRAELYIKTRT 185

Query: 736  RRDGSVLASAREKYDQVKAVQKRRLESGETDTEDINSDALTEVLGKEKKNRVRGVGSNIT 915
            R+DG  + +   +       Q+ + +    D+ D + DA  +V+G+EK   VR  G    
Sbjct: 186  RKDGQPMNNVAAEIISKLREQETQKQQTSNDSNDWD-DAFFQVMGEEKNGHVRTYGLGPN 244

Query: 916  RKHLQHAAVANDLINQMATTSVAKVEADMASFKSKVDGDMSEVKSM 1053
               L    + +  + +MA+ +      +++    K++    +  SM
Sbjct: 245  PSDLWGQKLGHIELIRMASEAKKSANEEVSKMLGKMEAMEKKYASM 290


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